RNA–Protein interactions for RNA: ENST00000495755.1

VPS52-221, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 453 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-221ENST00000495755 ADD2P35612 726 aa8.74□□□□□ -1.01
VPS52-221ENST00000495755 PLCD1P51178 756 aa8.74□□□□□ -1.01
VPS52-221ENST00000495755 FCGRTP55899 365 aa8.74□□□□□ -1.01
VPS52-221ENST00000495755 BACE1P56817 501 aa8.74□□□□□ -1.01
VPS52-221ENST00000495755 MTMR2Q13614 643 aa8.74□□□□□ -1.01
VPS52-221ENST00000495755 SLC4A8Q2Y0W8 1093 aa8.74□□□□□ -1.01
VPS52-221ENST00000495755 SMCR8Q8TEV9 937 aaPredicted RBP8.74□□□□□ -1.01
VPS52-221ENST00000495755 SH3TC2Q8TF17 1288 aa8.74□□□□□ -1.01
VPS52-221ENST00000495755 CRNKL1Q9BZJ0 848 aaKnown RBP8.74□□□□□ -1.01
VPS52-221ENST00000495755 ASCC2Q9H1I8 757 aaPredicted RBP8.74□□□□□ -1.01
VPS52-221ENST00000495755 PNMA3Q9UL41 463 aa8.74□□□□□ -1.01
VPS52-221ENST00000495755 PCDHB15Q9Y5E8 787 aa8.74□□□□□ -1.01
VPS52-221ENST00000495755 ATAD5Q96QE3 1844 aa8.73□□□□□ -1.01
VPS52-221ENST00000495755 C19orf81C9J6K1 198 aa8.73□□□□□ -1.01
VPS52-221ENST00000495755 USP17L10C9JJH3 530 aa8.73□□□□□ -1.01
VPS52-221ENST00000495755 GH2P01242 217 aa8.73□□□□□ -1.01
VPS52-221ENST00000495755 CHGBP05060 677 aa8.73□□□□□ -1.01
VPS52-221ENST00000495755 EN2P19622 333 aaPredicted RBP8.73□□□□□ -1.01
VPS52-221ENST00000495755 HOXA7P31268 230 aaPredicted RBP8.73□□□□□ -1.01
VPS52-221ENST00000495755 SHMT1P34896 483 aa8.73□□□□□ -1.01
VPS52-221ENST00000495755 GCLCP48506 637 aaPredicted RBP8.73□□□□□ -1.01
VPS52-221ENST00000495755 RRP1P56182 461 aaKnown RBP8.73□□□□□ -1.01
VPS52-221ENST00000495755 PRKCZQ05513 592 aa8.73□□□□□ -1.01
VPS52-221ENST00000495755 GABPAQ06546 454 aa8.73□□□□□ -1.01
VPS52-221ENST00000495755 PABPC4Q13310 644 aaKnown RBP eCLIP8.73□□□□□ -1.01
VPS52-221ENST00000495755 UBE3CQ15386 1083 aa8.73□□□□□ -1.01
VPS52-221ENST00000495755 FAM110CQ1W6H9 321 aa8.73□□□□□ -1.01
VPS52-221ENST00000495755 SLFNL1Q499Z3 407 aa8.73□□□□□ -1.01
VPS52-221ENST00000495755 LCORLQ8N3X6 602 aa8.73□□□□□ -1.01
VPS52-221ENST00000495755 ANKRD13CQ8N6S4 541 aa8.73□□□□□ -1.01
VPS52-221ENST00000495755 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.73□□□□□ -1.013e-8■■■■■ 47.2
VPS52-221ENST00000495755 ARMT1Q9H993 441 aa8.73□□□□□ -1.01
VPS52-221ENST00000495755 DCP1AQ9NPI6 582 aaPredicted RBP8.73□□□□□ -1.01
VPS52-221ENST00000495755 EMILIN3Q9NT22 766 aa8.73□□□□□ -1.01
VPS52-221ENST00000495755 ECHDC1Q9NTX5 307 aa8.73□□□□□ -1.01
VPS52-221ENST00000495755 MYPNQ86TC9 1320 aa8.73□□□□□ -1.01
VPS52-221ENST00000495755 LOC285556D6RIA3 1793 aa8.73□□□□□ -1.01
VPS52-221ENST00000495755 PRKAB2O43741 272 aa8.72□□□□□ -1.01
VPS52-221ENST00000495755 MBD4O95243 580 aa8.72□□□□□ -1.01
VPS52-221ENST00000495755 POLR3DP05423 398 aaPredicted RBP8.72□□□□□ -1.01
VPS52-221ENST00000495755 GRK4P32298 578 aa8.72□□□□□ -1.01
VPS52-221ENST00000495755 EVX2Q03828 476 aa8.72□□□□□ -1.01
VPS52-221ENST00000495755 ABCB5Q2M3G0 1257 aa8.72□□□□□ -1.01
VPS52-221ENST00000495755 CERKLQ49MI3 558 aaPredicted RBP8.72□□□□□ -1.01
VPS52-221ENST00000495755 RAET1EQ8TD07 263 aa8.72□□□□□ -1.01
VPS52-221ENST00000495755 SDR42E1Q8WUS8 393 aa8.72□□□□□ -1.01
VPS52-221ENST00000495755 P2RX7Q99572 595 aaKnown RBP8.72□□□□□ -1.01
VPS52-221ENST00000495755 TMEM106CQ9BVX2 250 aa8.72□□□□□ -1.01
VPS52-221ENST00000495755 MCM9Q9NXL9 1143 aa8.72□□□□□ -1.01
VPS52-221ENST00000495755 TMOD4Q9NZQ9 345 aa8.72□□□□□ -1.01
VPS52-221ENST00000495755 GABRQQ9UN88 632 aa8.72□□□□□ -1.01
VPS52-221ENST00000495755 MYH1P12882 1939 aa8.72□□□□□ -1.01
VPS52-221ENST00000495755 KIAA0100Q14667 2235 aaKnown RBP8.72□□□□□ -1.01
VPS52-221ENST00000495755 DDX60LQ5H9U9 1706 aaKnown RBP8.71□□□□□ -1.01
VPS52-221ENST00000495755 PDE4DIPQ5VU43 2346 aa8.71□□□□□ -1.01
VPS52-221ENST00000495755 RBBP6Q7Z6E9 1792 aaKnown RBP8.71□□□□□ -1.01
VPS52-221ENST00000495755 TNPO2O14787 897 aaKnown RBP8.71□□□□□ -1.02
VPS52-221ENST00000495755 CYP2D6P10635 497 aa8.71□□□□□ -1.02
VPS52-221ENST00000495755 GUCY1A2P33402 732 aa8.71□□□□□ -1.02
VPS52-221ENST00000495755 FLT3LGP49771 235 aa8.71□□□□□ -1.02
VPS52-221ENST00000495755 IRF5Q13568 498 aa8.71□□□□□ -1.02
VPS52-221ENST00000495755 ZSCAN25Q6NSZ9 544 aa8.71□□□□□ -1.02
VPS52-221ENST00000495755 USP17L2Q6R6M4 530 aa8.71□□□□□ -1.02
VPS52-221ENST00000495755 ACER1Q8TDN7 264 aa8.71□□□□□ -1.02
VPS52-221ENST00000495755 C12orf42Q96LP6 360 aa8.71□□□□□ -1.02
VPS52-221ENST00000495755 ATP8A2Q9NTI2 1148 aa8.71□□□□□ -1.02
VPS52-221ENST00000495755 MORF4L1Q9UBU8 362 aa8.71□□□□□ -1.02
VPS52-221ENST00000495755 TAOK2Q9UL54 1235 aa8.71□□□□□ -1.02
VPS52-221ENST00000495755 MYCP01106 439 aaPredicted RBP8.7□□□□□ -1.02
VPS52-221ENST00000495755 HERVK_113P62684 666 aa8.7□□□□□ -1.02
VPS52-221ENST00000495755 IRX3P78415 501 aaPredicted RBP8.7□□□□□ -1.02
VPS52-221ENST00000495755 RAB3GAP1Q15042 981 aa8.7□□□□□ -1.02
VPS52-221ENST00000495755 MTFR1Q15390 333 aa8.7□□□□□ -1.02
VPS52-221ENST00000495755 TSHZ3Q63HK5 1081 aa8.7□□□□□ -1.02
VPS52-221ENST00000495755 POTEEQ6S8J3 1075 aa8.7□□□□□ -1.02
VPS52-221ENST00000495755 KBTBD3Q8NAB2 608 aa8.7□□□□□ -1.02
VPS52-221ENST00000495755 SLAIN1Q8ND83 568 aa8.7□□□□□ -1.02
VPS52-221ENST00000495755 PXYLP1Q8TE99 480 aa8.7□□□□□ -1.02
VPS52-221ENST00000495755 COA7Q96BR5 231 aa8.7□□□□□ -1.02
VPS52-221ENST00000495755 GPATCH3Q96I76 525 aa8.7□□□□□ -1.02
VPS52-221ENST00000495755 STRBPQ96SI9 672 aaKnown RBP8.7□□□□□ -1.02
VPS52-221ENST00000495755 CRBNQ96SW2 442 aa8.7□□□□□ -1.02
VPS52-221ENST00000495755 KIAA1683Q9H0B3 1180 aa8.7□□□□□ -1.02
VPS52-221ENST00000495755 PUS7LQ9H0K6 701 aaKnown RBP8.7□□□□□ -1.02
VPS52-221ENST00000495755 CABP5Q9NP86 173 aa8.7□□□□□ -1.02
VPS52-221ENST00000495755 RBPJLQ9UBG7 517 aa8.7□□□□□ -1.02
VPS52-221ENST00000495755 GJD2Q9UKL4 321 aa8.7□□□□□ -1.02
VPS52-221ENST00000495755 MGAMO43451 1857 aa8.7□□□□□ -1.02
VPS52-221ENST00000495755 A0A1W2PRG0 241 aa8.69□□□□□ -1.02
VPS52-221ENST00000495755 USP17L15C9J2P7 530 aa8.69□□□□□ -1.02
VPS52-221ENST00000495755 USP17L13C9JLJ4 530 aa8.69□□□□□ -1.02
VPS52-221ENST00000495755 USP17L12C9JPN9 530 aa8.69□□□□□ -1.02
VPS52-221ENST00000495755 USP17L11C9JVI0 530 aa8.69□□□□□ -1.02
VPS52-221ENST00000495755 USP17L21D6R901 530 aa8.69□□□□□ -1.02
VPS52-221ENST00000495755 USP17L18D6R9N7 530 aa8.69□□□□□ -1.02
VPS52-221ENST00000495755 USP17L22D6RA61 530 aa8.69□□□□□ -1.02
VPS52-221ENST00000495755 USP17L17D6RBQ6 530 aa8.69□□□□□ -1.02
VPS52-221ENST00000495755 USP17L19D6RCP7 530 aa8.69□□□□□ -1.02
VPS52-221ENST00000495755 USP17L20D6RJB6 530 aa8.69□□□□□ -1.02
VPS52-221ENST00000495755 SMIM22K7EJ46 135 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms