RNA–Protein interactions for RNA: ENST00000493903.1

GTF3A-208, Transcript of general transcription factor IIIA, humanhuman

TSL 3

Gene GTF3A, Length 748 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-208ENST00000493903 NISCHQ9Y2I1 1504 aa6.04□□□□□ -1.44
GTF3A-208ENST00000493903 LOC102724159A0A0B4J2E5 919 aa6.03□□□□□ -1.44
GTF3A-208ENST00000493903 MYCLP1P12525 358 aaPredicted RBP6.03□□□□□ -1.44
GTF3A-208ENST00000493903 POU3F3P20264 500 aaPredicted RBP6.03□□□□□ -1.44
GTF3A-208ENST00000493903 ZNF143P52747 638 aaPredicted RBP6.03□□□□□ -1.44
GTF3A-208ENST00000493903 PDE4BQ07343 736 aa6.03□□□□□ -1.44
GTF3A-208ENST00000493903 PWP2Q15269 919 aaKnown RBP6.03□□□□□ -1.44
GTF3A-208ENST00000493903 SLC10A6Q3KNW5 377 aa6.03□□□□□ -1.44
GTF3A-208ENST00000493903 TMEM201Q5SNT2 666 aa6.03□□□□□ -1.44
GTF3A-208ENST00000493903 PERM1Q5SV97 790 aa6.03□□□□□ -1.44
GTF3A-208ENST00000493903 MAP1SQ66K74 1059 aaPredicted RBP6.03□□□□□ -1.44
GTF3A-208ENST00000493903 PSAPL1Q6NUJ1 521 aa6.03□□□□□ -1.44
GTF3A-208ENST00000493903 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.03□□□□□ -1.44
GTF3A-208ENST00000493903 NLRC3Q7RTR2 1065 aa6.03□□□□□ -1.44
GTF3A-208ENST00000493903 HDXQ7Z353 690 aa6.03□□□□□ -1.44
GTF3A-208ENST00000493903 TTC9Q92623 222 aa6.03□□□□□ -1.44
GTF3A-208ENST00000493903 ATG4CQ96DT6 458 aa6.03□□□□□ -1.44
GTF3A-208ENST00000493903 TRIM11Q96F44 468 aa6.03□□□□□ -1.44
GTF3A-208ENST00000493903 C8orf48Q96LL4 319 aa6.03□□□□□ -1.44
GTF3A-208ENST00000493903 KIF2CQ99661 725 aa6.03□□□□□ -1.44
GTF3A-208ENST00000493903 CNNM2Q9H8M5 875 aa6.03□□□□□ -1.44
GTF3A-208ENST00000493903 JPH1Q9HDC5 661 aaPredicted RBP6.03□□□□□ -1.44
GTF3A-208ENST00000493903 TCEAL9Q9UHQ7 104 aa6.03□□□□□ -1.44
GTF3A-208ENST00000493903 PCDHA4Q9UN74 947 aa6.03□□□□□ -1.44
GTF3A-208ENST00000493903 LTBP3Q9NS15 1303 aa6.02□□□□□ -1.45
GTF3A-208ENST00000493903 A0A087X0B3 334 aa6.02□□□□□ -1.45
GTF3A-208ENST00000493903 SLC22A31A6NKX4 558 aa6.02□□□□□ -1.45
GTF3A-208ENST00000493903 AGRPO00253 132 aa6.02□□□□□ -1.45
GTF3A-208ENST00000493903 SOX1O00570 391 aaPredicted RBP6.02□□□□□ -1.45
GTF3A-208ENST00000493903 PLD2O14939 933 aa6.02□□□□□ -1.45
GTF3A-208ENST00000493903 LILRB5O75023 590 aa6.02□□□□□ -1.45
GTF3A-208ENST00000493903 MAP4K4O95819 1239 aaPredicted RBP6.02□□□□□ -1.45
GTF3A-208ENST00000493903 CYP11A1P05108 521 aa6.02□□□□□ -1.45
GTF3A-208ENST00000493903 ACRP10323 421 aa6.02□□□□□ -1.45
GTF3A-208ENST00000493903 NAT2P11245 290 aa6.02□□□□□ -1.45
GTF3A-208ENST00000493903 COL8A1P27658 744 aa6.02□□□□□ -1.45
GTF3A-208ENST00000493903 CDC27P30260 824 aa6.02□□□□□ -1.45
GTF3A-208ENST00000493903 CDKN1CP49918 316 aaPredicted RBP6.02□□□□□ -1.45
GTF3A-208ENST00000493903 PABPC4Q13310 644 aaKnown RBP eCLIP6.02□□□□□ -1.45
GTF3A-208ENST00000493903 COL9A3Q14050 684 aaPredicted RBP6.02□□□□□ -1.45
GTF3A-208ENST00000493903 FNDC3BQ53EP0 1204 aaKnown RBP6.02□□□□□ -1.45
GTF3A-208ENST00000493903 BRDTQ58F21 947 aaPredicted RBP6.02□□□□□ -1.45
GTF3A-208ENST00000493903 WIPI1Q5MNZ9 446 aaPredicted RBP6.02□□□□□ -1.45
GTF3A-208ENST00000493903 OVOS1Q6IE37 1185 aa6.02□□□□□ -1.45
GTF3A-208ENST00000493903 ELMSAN1Q6PJG2 1045 aa6.02□□□□□ -1.45
GTF3A-208ENST00000493903 JAMLQ86YT9 394 aa6.02□□□□□ -1.45
GTF3A-208ENST00000493903 DHX37Q8IY37 1157 aaKnown RBP6.02□□□□□ -1.45
GTF3A-208ENST00000493903 LPIN3Q9BQK8 851 aa6.02□□□□□ -1.45
GTF3A-208ENST00000493903 RUSC1Q9BVN2 902 aa6.02□□□□□ -1.45
GTF3A-208ENST00000493903 REV1Q9UBZ9 1251 aa6.02□□□□□ -1.45
GTF3A-208ENST00000493903 ADAM30Q9UKF2 790 aa6.02□□□□□ -1.45
GTF3A-208ENST00000493903 MAPRE3Q9UPY8 281 aa6.02□□□□□ -1.45
GTF3A-208ENST00000493903 H3BRJ5 948 aa6.01□□□□□ -1.45
GTF3A-208ENST00000493903 GDF11O95390 407 aa6.01□□□□□ -1.45
GTF3A-208ENST00000493903 SELPP16109 830 aa6.01□□□□□ -1.45
GTF3A-208ENST00000493903 CCNFP41002 786 aa6.01□□□□□ -1.45
GTF3A-208ENST00000493903 SLC7A5Q01650 507 aa6.01□□□□□ -1.45
GTF3A-208ENST00000493903 BBS9Q3SYG4 887 aa6.01□□□□□ -1.45
GTF3A-208ENST00000493903 CT47A1Q5JQC4 288 aaPredicted RBP6.01□□□□□ -1.45
GTF3A-208ENST00000493903 GORABQ5T7V8 394 aa6.01□□□□□ -1.45
GTF3A-208ENST00000493903 KIAA1211LQ6NV74 962 aa6.01□□□□□ -1.45
GTF3A-208ENST00000493903 MPRIPQ6WCQ1 1025 aa6.01□□□□□ -1.45
GTF3A-208ENST00000493903 DDX42Q86XP3 938 aaKnown RBP eCLIP6.01□□□□□ -1.45
GTF3A-208ENST00000493903 GPBAR1Q8TDU6 330 aa6.01□□□□□ -1.45
GTF3A-208ENST00000493903 WNT8BQ93098 351 aa6.01□□□□□ -1.45
GTF3A-208ENST00000493903 KISS1RQ969F8 398 aaPredicted RBP6.01□□□□□ -1.45
GTF3A-208ENST00000493903 PLPPR2Q96GM1 343 aa6.01□□□□□ -1.45
GTF3A-208ENST00000493903 ACSBG1Q96GR2 724 aa6.01□□□□□ -1.45
GTF3A-208ENST00000493903 PLVAPQ9BX97 442 aa6.01□□□□□ -1.45
GTF3A-208ENST00000493903 SMG9Q9H0W8 520 aaKnown RBP6.01□□□□□ -1.45
GTF3A-208ENST00000493903 NCOA5Q9HCD5 579 aaKnown RBP6.01□□□□□ -1.45
GTF3A-208ENST00000493903 PRDM6Q9NQX0 595 aa6.01□□□□□ -1.45
GTF3A-208ENST00000493903 INTS7Q9NVH2 962 aaKnown RBP6.01□□□□□ -1.45
GTF3A-208ENST00000493903 ZNF214Q9UL59 606 aaPredicted RBP6.01□□□□□ -1.45
GTF3A-208ENST00000493903 EID1Q9Y6B2 187 aa6.01□□□□□ -1.45
GTF3A-208ENST00000493903 PIK3R2O00459 728 aa6□□□□□ -1.45
GTF3A-208ENST00000493903 PDE8AO60658 829 aa6□□□□□ -1.45
GTF3A-208ENST00000493903 RGS9O75916 674 aaPredicted RBP6□□□□□ -1.45
GTF3A-208ENST00000493903 NID1P14543 1247 aa6□□□□□ -1.45
GTF3A-208ENST00000493903 PLCG1P19174 1290 aa6□□□□□ -1.45
GTF3A-208ENST00000493903 CDK8P49336 464 aa6□□□□□ -1.45
GTF3A-208ENST00000493903 AFF1P51825 1210 aaKnown RBP6□□□□□ -1.45
GTF3A-208ENST00000493903 TBX4P57082 545 aa6□□□□□ -1.45
GTF3A-208ENST00000493903 NFKB2Q00653 900 aa6□□□□□ -1.45
GTF3A-208ENST00000493903 ZYXQ15942 572 aaKnown RBP6□□□□□ -1.45
GTF3A-208ENST00000493903 AKAP4Q5JQC9 854 aa6□□□□□ -1.45
GTF3A-208ENST00000493903 LRFN4Q6PJG9 635 aa6□□□□□ -1.45
GTF3A-208ENST00000493903 RNF180Q86T96 592 aa6□□□□□ -1.45
GTF3A-208ENST00000493903 TMEM151AQ8N4L1 468 aa6□□□□□ -1.45
GTF3A-208ENST00000493903 KLHL6Q8WZ60 621 aa6□□□□□ -1.45
GTF3A-208ENST00000493903 DCAF5Q96JK2 942 aa6□□□□□ -1.45
GTF3A-208ENST00000493903 SLC9A7Q96T83 725 aa6□□□□□ -1.45
GTF3A-208ENST00000493903 DHRS4Q9BTZ2 278 aa6□□□□□ -1.45
GTF3A-208ENST00000493903 LACRTQ9GZZ8 138 aa6□□□□□ -1.45
GTF3A-208ENST00000493903 SH2B1Q9NRF2 756 aaPredicted RBP6□□□□□ -1.45
GTF3A-208ENST00000493903 TRIM33Q9UPN9 1127 aa6□□□□□ -1.45
GTF3A-208ENST00000493903 THRAP3Q9Y2W1 955 aaKnown RBP6□□□□□ -1.45
GTF3A-208ENST00000493903 DNAJC25-GNG10A0A024R161 153 aa5.99□□□□□ -1.45
GTF3A-208ENST00000493903 GSG1L2A8MUP6 293 aa5.99□□□□□ -1.45
GTF3A-208ENST00000493903 IRS4O14654 1257 aaPredicted RBP5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms