RNA–Protein interactions for RNA: ENST00000492826.1

GCFC2-210, Transcript of GC-rich sequence DNA-binding factor 2, human

TSL 3

Gene GCFC2, Length 443 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GCFC2-210	ENST00000492826	PARD6A	Q9NPB6	346 aa		5.66	□□□□□ -1.5
GCFC2-210	ENST00000492826	DISC1	Q9NRI5	854 aa		5.66	□□□□□ -1.5
GCFC2-210	ENST00000492826	PPP4R2	Q9NY27	417 aa		5.66	□□□□□ -1.5
GCFC2-210	ENST00000492826	SMG5	Q9UPR3	1016 aa	Known RBP	5.66	□□□□□ -1.5
GCFC2-210	ENST00000492826	ETV2	O00321	342 aa	Predicted RBP	5.65	□□□□□ -1.5
GCFC2-210	ENST00000492826	USP17L7	P0C7H9	530 aa		5.65	□□□□□ -1.5
GCFC2-210	ENST00000492826	MEI1	Q5TIA1	1274 aa		5.65	□□□□□ -1.5
GCFC2-210	ENST00000492826	ARHGAP27	Q6ZUM4	889 aa		5.65	□□□□□ -1.5
GCFC2-210	ENST00000492826	CYFIP1	Q7L576	1253 aa		5.65	□□□□□ -1.5
GCFC2-210	ENST00000492826	GALNT12	Q8IXK2	581 aa		5.65	□□□□□ -1.5
GCFC2-210	ENST00000492826	TCF12	Q99081	682 aa		5.65	□□□□□ -1.5
GCFC2-210	ENST00000492826	CAPN10	Q9HC96	672 aa		5.65	□□□□□ -1.5
GCFC2-210	ENST00000492826	FAM8A1	Q9UBU6	413 aa		5.65	□□□□□ -1.5
GCFC2-210	ENST00000492826	PCDHGC5	Q9Y5F6	944 aa		5.65	□□□□□ -1.5
GCFC2-210	ENST00000492826	GIPC1	O14908	333 aa		5.64	□□□□□ -1.51
GCFC2-210	ENST00000492826	LIG1	P18858	919 aa		5.64	□□□□□ -1.51
GCFC2-210	ENST00000492826	GLDC	P23378	1020 aa		5.64	□□□□□ -1.51
GCFC2-210	ENST00000492826	LINC00310	P59036	64 aa		5.64	□□□□□ -1.51
GCFC2-210	ENST00000492826	PDE3A	Q14432	1141 aa		5.64	□□□□□ -1.51
GCFC2-210	ENST00000492826	TAF1C	Q15572	869 aa	Predicted RBP	5.64	□□□□□ -1.51
GCFC2-210	ENST00000492826	NKPD1	Q17RQ9	610 aa		5.64	□□□□□ -1.51
GCFC2-210	ENST00000492826	ZNF394	Q53GI3	561 aa		5.64	□□□□□ -1.51
GCFC2-210	ENST00000492826	METTL16	Q86W50	562 aa	Known RBP	5.64	□□□□□ -1.51
GCFC2-210	ENST00000492826	C8orf37	Q96NL8	207 aa		5.64	□□□□□ -1.51
GCFC2-210	ENST00000492826	METTL5	Q9NRN9	209 aa	Known RBP	5.64	□□□□□ -1.51
GCFC2-210	ENST00000492826	GGT7	Q9UJ14	662 aa		5.64	□□□□□ -1.51
GCFC2-210	ENST00000492826	TTF2	Q9UNY4	1162 aa	Known RBP	5.64	□□□□□ -1.51
GCFC2-210	ENST00000492826	PCDHGB7	Q9Y5F8	929 aa		5.64	□□□□□ -1.51
GCFC2-210	ENST00000492826	FCGRT	P55899	365 aa		5.63	□□□□□ -1.51
GCFC2-210	ENST00000492826	GRM2	Q14416	872 aa		5.63	□□□□□ -1.51
GCFC2-210	ENST00000492826	HS2ST1	Q7LGA3	356 aa		5.63	□□□□□ -1.51
GCFC2-210	ENST00000492826	DRC1	Q96MC2	740 aa		5.63	□□□□□ -1.51
GCFC2-210	ENST00000492826	ATXN3L	Q9H3M9	355 aa		5.63	□□□□□ -1.51
GCFC2-210	ENST00000492826	ACBD3	Q9H3P7	528 aa		5.63	□□□□□ -1.51
GCFC2-210	ENST00000492826	PIDD1	Q9HB75	910 aa		5.63	□□□□□ -1.51
GCFC2-210	ENST00000492826	AKAP2	Q9Y2D5	859 aa		5.63	□□□□□ -1.51
GCFC2-210	ENST00000492826		A0A1W2PP55	124 aa		5.62	□□□□□ -1.51
GCFC2-210	ENST00000492826	TCAF2	A6NFQ2	919 aa		5.62	□□□□□ -1.51
GCFC2-210	ENST00000492826	NUAK1	O60285	661 aa		5.62	□□□□□ -1.51
GCFC2-210	ENST00000492826	GSTT1	P30711	240 aa		5.62	□□□□□ -1.51
GCFC2-210	ENST00000492826	TNNI2	P48788	182 aa		5.62	□□□□□ -1.51
GCFC2-210	ENST00000492826	RAD51AP2	Q09MP3	1159 aa		5.62	□□□□□ -1.51
GCFC2-210	ENST00000492826	TTLL4	Q14679	1199 aa		5.62	□□□□□ -1.51
GCFC2-210	ENST00000492826	DTHD1	Q6ZMT9	781 aa		5.62	□□□□□ -1.51
GCFC2-210	ENST00000492826	USP48	Q86UV5	1035 aa		5.62	□□□□□ -1.51
GCFC2-210	ENST00000492826	TOP6BL	Q8N6T0	577 aa		5.62	□□□□□ -1.51
GCFC2-210	ENST00000492826	SREK1	Q8WXA9	508 aa	Known RBP	5.62	□□□□□ -1.51
GCFC2-210	ENST00000492826	SRCIN1	Q9C0H9	1055 aa		5.62	□□□□□ -1.51
GCFC2-210	ENST00000492826	TGIF2	Q9GZN2	237 aa		5.62	□□□□□ -1.51
GCFC2-210	ENST00000492826	CCDC86	Q9H6F5	360 aa	Known RBP	5.62	□□□□□ -1.51
GCFC2-210	ENST00000492826	LIN7B	Q9HAP6	207 aa		5.62	□□□□□ -1.51
GCFC2-210	ENST00000492826	EPB41L3	Q9Y2J2	1087 aa	Predicted RBP	5.62	□□□□□ -1.51
GCFC2-210	ENST00000492826	SHROOM4	Q9ULL8	1493 aa		5.62	□□□□□ -1.51
GCFC2-210	ENST00000492826	LOC105371045	A0A1W2PR82	267 aa		5.61	□□□□□ -1.51
GCFC2-210	ENST00000492826		F6X3S4	739 aa		5.61	□□□□□ -1.51
GCFC2-210	ENST00000492826	ZNF862	O60290	1169 aa		5.61	□□□□□ -1.51
GCFC2-210	ENST00000492826	FBXO24	O75426	580 aa		5.61	□□□□□ -1.51
GCFC2-210	ENST00000492826	NEFM	P07197	916 aa		5.61	□□□□□ -1.51
GCFC2-210	ENST00000492826	GDNF	P39905	211 aa		5.61	□□□□□ -1.51
GCFC2-210	ENST00000492826	NFKB2	Q00653	900 aa		5.61	□□□□□ -1.51
GCFC2-210	ENST00000492826	ID3	Q02535	119 aa		5.61	□□□□□ -1.51
GCFC2-210	ENST00000492826	GNL2	Q13823	731 aa	Known RBP	5.61	□□□□□ -1.51
GCFC2-210	ENST00000492826	USP31	Q70CQ4	1352 aa		5.61	□□□□□ -1.51
GCFC2-210	ENST00000492826	PCOLCE2	Q9UKZ9	415 aa		5.61	□□□□□ -1.51
GCFC2-210	ENST00000492826	TRAK1	Q9UPV9	953 aa		5.61	□□□□□ -1.51
GCFC2-210	ENST00000492826	INPP5F	Q9Y2H2	1132 aa		5.61	□□□□□ -1.51
GCFC2-210	ENST00000492826	IGF2BP3	O00425	579 aa	Known RBP eCLIP	5.6	□□□□□ -1.51
GCFC2-210	ENST00000492826	HCLS1	P14317	486 aa	Predicted RBP	5.6	□□□□□ -1.51
GCFC2-210	ENST00000492826	DNAJA1	P31689	397 aa	Known RBP	5.6	□□□□□ -1.51
GCFC2-210	ENST00000492826	SF3A1	Q15459	793 aa	Known RBP	5.6	□□□□□ -1.51
GCFC2-210	ENST00000492826	CCDC85B	Q15834	202 aa	Predicted RBP	5.6	□□□□□ -1.51
GCFC2-210	ENST00000492826	KIAA0319	Q5VV43	1072 aa		5.6	□□□□□ -1.51
GCFC2-210	ENST00000492826	ZNF654	Q8IZM8	581 aa		5.6	□□□□□ -1.51
GCFC2-210	ENST00000492826	KCNC2	Q96PR1	638 aa		5.6	□□□□□ -1.51
GCFC2-210	ENST00000492826	TANGO6	Q9C0B7	1094 aa		5.6	□□□□□ -1.51
GCFC2-210	ENST00000492826	IRF2BPL	Q9H1B7	796 aa		5.6	□□□□□ -1.51
GCFC2-210	ENST00000492826	EPB41L4B	Q9H329	900 aa		5.6	□□□□□ -1.51
GCFC2-210	ENST00000492826	ZNF576	Q9H609	170 aa		5.6	□□□□□ -1.51
GCFC2-210	ENST00000492826	DCP1A	Q9NPI6	582 aa	Predicted RBP	5.6	□□□□□ -1.51
GCFC2-210	ENST00000492826	MAP3K11	Q16584	847 aa		5.59	□□□□□ -1.51
GCFC2-210	ENST00000492826	KIF4B	Q2VIQ3	1234 aa		5.59	□□□□□ -1.51
GCFC2-210	ENST00000492826	CARS2	Q9HA77	564 aa	Known RBP	5.59	□□□□□ -1.51
GCFC2-210	ENST00000492826	TMEM238L	A0A1B0GVL6	79 aa		5.58	□□□□□ -1.52
GCFC2-210	ENST00000492826	MINDY4B	A8MYZ0	360 aa		5.58	□□□□□ -1.52
GCFC2-210	ENST00000492826	RNGTT	O60942	597 aa	Known RBP	5.58	□□□□□ -1.52
GCFC2-210	ENST00000492826	SYN1	P17600	705 aa		5.58	□□□□□ -1.52
GCFC2-210	ENST00000492826	RACK1	P63244	317 aa	Known RBP	5.58	□□□□□ -1.52
GCFC2-210	ENST00000492826	AP3B2	Q13367	1082 aa		5.58	□□□□□ -1.52
GCFC2-210	ENST00000492826	SKOR2	Q2VWA4	1001 aa	Predicted RBP	5.58	□□□□□ -1.52
GCFC2-210	ENST00000492826	TPTE2	Q6XPS3	522 aa		5.58	□□□□□ -1.52
GCFC2-210	ENST00000492826	DDX54	Q8TDD1	881 aa	Known RBP	5.58	□□□□□ -1.52
GCFC2-210	ENST00000492826	ISL2	Q96A47	359 aa		5.58	□□□□□ -1.52
GCFC2-210	ENST00000492826	ZCCHC4	Q9H5U6	513 aa		5.58	□□□□□ -1.52
GCFC2-210	ENST00000492826	COPRS	Q9NQ92	184 aa		5.58	□□□□□ -1.52
GCFC2-210	ENST00000492826	DDX41	Q9UJV9	622 aa	Known RBP	5.58	□□□□□ -1.52
GCFC2-210	ENST00000492826	SLFN14	P0C7P3	912 aa		5.57	□□□□□ -1.52
GCFC2-210	ENST00000492826	SRF	P11831	508 aa		5.57	□□□□□ -1.52
GCFC2-210	ENST00000492826	BMP7	P18075	431 aa		5.57	□□□□□ -1.52
GCFC2-210	ENST00000492826	ITPKA	P23677	461 aa		5.57	□□□□□ -1.52
GCFC2-210	ENST00000492826	ST13	P50502	369 aa	Known RBP	5.57	□□□□□ -1.52

Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms