RNA–Protein interactions for RNA: ENST00000492511.1

PDLIM1-204, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 453 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-204ENST00000492511 SERPINB13Q9UIV8 391 aa8.66□□□□□ -1.02
PDLIM1-204ENST00000492511 SLC4A4Q9Y6R1 1079 aa8.66□□□□□ -1.02
PDLIM1-204ENST00000492511 LAMB1P07942 1786 aa8.66□□□□□ -1.02
PDLIM1-204ENST00000492511 TRIM75PA6NK02 468 aa8.65□□□□□ -1.02
PDLIM1-204ENST00000492511 USP17L5A8MUK1 530 aa8.65□□□□□ -1.02
PDLIM1-204ENST00000492511 USP17L12C9JPN9 530 aa8.65□□□□□ -1.02
PDLIM1-204ENST00000492511 USP17L21D6R901 530 aa8.65□□□□□ -1.02
PDLIM1-204ENST00000492511 PDHXO00330 501 aa8.65□□□□□ -1.02
PDLIM1-204ENST00000492511 FOXP2O15409 715 aa8.65□□□□□ -1.02
PDLIM1-204ENST00000492511 GPAA1O43292 621 aa8.65□□□□□ -1.02
PDLIM1-204ENST00000492511 FKTNO75072 461 aa8.65□□□□□ -1.02
PDLIM1-204ENST00000492511 GH2P01242 217 aa8.65□□□□□ -1.02
PDLIM1-204ENST00000492511 SPP2Q13103 211 aa8.65□□□□□ -1.02
PDLIM1-204ENST00000492511 SLC44A5Q8NCS7 719 aa8.65□□□□□ -1.02
PDLIM1-204ENST00000492511 ZNF280CQ8ND82 737 aa8.65□□□□□ -1.02
PDLIM1-204ENST00000492511 EVI5LQ96CN4 794 aa8.65□□□□□ -1.02
PDLIM1-204ENST00000492511 FSD1Q9BTV5 496 aa8.65□□□□□ -1.02
PDLIM1-204ENST00000492511 WDR18Q9BV38 432 aa8.65□□□□□ -1.02
PDLIM1-204ENST00000492511 EPB41L4AQ9HCS5 686 aaPredicted RBP8.65□□□□□ -1.02
PDLIM1-204ENST00000492511 ZCCHC17Q9NP64 241 aaKnown RBP8.65□□□□□ -1.02
PDLIM1-204ENST00000492511 ZBTB47Q9UFB7 747 aaPredicted RBP8.65□□□□□ -1.02
PDLIM1-204ENST00000492511 ZBTB21Q9ULJ3 1066 aa8.65□□□□□ -1.02
PDLIM1-204ENST00000492511 CDK5RAP2Q96SN8 1893 aa8.64□□□□□ -1.03
PDLIM1-204ENST00000492511 FOCADQ5VW36 1801 aa8.64□□□□□ -1.03
PDLIM1-204ENST00000492511 ADGRA2Q96PE1 1338 aa8.64□□□□□ -1.03
PDLIM1-204ENST00000492511 DDX60LQ5H9U9 1706 aaKnown RBP8.64□□□□□ -1.03
PDLIM1-204ENST00000492511 PATL2C9JE40 543 aaKnown RBP8.64□□□□□ -1.03
PDLIM1-204ENST00000492511 TLR2O60603 784 aa8.64□□□□□ -1.03
PDLIM1-204ENST00000492511 ASNSP08243 561 aa8.64□□□□□ -1.03
PDLIM1-204ENST00000492511 TAF1CQ15572 869 aaPredicted RBP8.64□□□□□ -1.03
PDLIM1-204ENST00000492511 CERKLQ49MI3 558 aaPredicted RBP8.64□□□□□ -1.03
PDLIM1-204ENST00000492511 SBK1Q52WX2 424 aa8.64□□□□□ -1.03
PDLIM1-204ENST00000492511 SH3D19Q5HYK7 790 aa8.64□□□□□ -1.03
PDLIM1-204ENST00000492511 TREML2Q5T2D2 321 aa8.64□□□□□ -1.03
PDLIM1-204ENST00000492511 C17orf99Q6UX52 265 aa8.64□□□□□ -1.03
PDLIM1-204ENST00000492511 CCDC129Q6ZRS4 1044 aa8.64□□□□□ -1.03
PDLIM1-204ENST00000492511 FASTKD5Q7L8L6 764 aaKnown RBP8.64□□□□□ -1.03
PDLIM1-204ENST00000492511 TBC1D2Q9BYX2 928 aa8.64□□□□□ -1.03
PDLIM1-204ENST00000492511 ZFYVE28Q9HCC9 887 aa8.64□□□□□ -1.03
PDLIM1-204ENST00000492511 GINM1Q9NU53 330 aa8.64□□□□□ -1.03
PDLIM1-204ENST00000492511 CENPFP49454 3210 aa8.64□□□□□ -1.03
PDLIM1-204ENST00000492511 CYP2C8P10632 490 aa8.63□□□□□ -1.03
PDLIM1-204ENST00000492511 CTGFP29279 349 aa8.63□□□□□ -1.03
PDLIM1-204ENST00000492511 CDK8P49336 464 aa8.63□□□□□ -1.03
PDLIM1-204ENST00000492511 HMGCS2P54868 508 aa8.63□□□□□ -1.03
PDLIM1-204ENST00000492511 BACE1P56817 501 aa8.63□□□□□ -1.03
PDLIM1-204ENST00000492511 SP3Q02447 781 aa8.63□□□□□ -1.03
PDLIM1-204ENST00000492511 ABCB5Q2M3G0 1257 aa8.63□□□□□ -1.03
PDLIM1-204ENST00000492511 GIMAP6Q6P9H5 292 aa8.63□□□□□ -1.03
PDLIM1-204ENST00000492511 GADL1Q6ZQY3 521 aa8.63□□□□□ -1.03
PDLIM1-204ENST00000492511 C16orf86Q6ZW13 317 aa8.63□□□□□ -1.03
PDLIM1-204ENST00000492511 CTU1Q7Z7A3 348 aaKnown RBP8.63□□□□□ -1.03
PDLIM1-204ENST00000492511 SIAH1Q8IUQ4 282 aa8.63□□□□□ -1.03
PDLIM1-204ENST00000492511 IFNL3Q8IZI9 196 aa8.63□□□□□ -1.03
PDLIM1-204ENST00000492511 ACER1Q8TDN7 264 aa8.63□□□□□ -1.03
PDLIM1-204ENST00000492511 FAM227BQ96M60 508 aa8.63□□□□□ -1.03
PDLIM1-204ENST00000492511 TRIM34Q9BYJ4 488 aa8.63□□□□□ -1.03
PDLIM1-204ENST00000492511 EMILIN3Q9NT22 766 aa8.63□□□□□ -1.03
PDLIM1-204ENST00000492511 CPA4Q9UI42 421 aa8.63□□□□□ -1.03
PDLIM1-204ENST00000492511 AK9Q5TCS8 1911 aa8.62□□□□□ -1.03
PDLIM1-204ENST00000492511 PHIPQ8WWQ0 1821 aa8.62□□□□□ -1.03
PDLIM1-204ENST00000492511 A0A0D9SFI3 127 aa8.62□□□□□ -1.03
PDLIM1-204ENST00000492511 A0A1W2PRG0 241 aa8.62□□□□□ -1.03
PDLIM1-204ENST00000492511 TRIM6-TRIM34B2RNG4 842 aa8.62□□□□□ -1.03
PDLIM1-204ENST00000492511 USP17L10C9JJH3 530 aa8.62□□□□□ -1.03
PDLIM1-204ENST00000492511 BCRP11274 1271 aa8.62□□□□□ -1.03
PDLIM1-204ENST00000492511 AKR1B1P15121 316 aa8.62□□□□□ -1.03
PDLIM1-204ENST00000492511 GSPT1P15170 499 aaKnown RBP8.62□□□□□ -1.03
PDLIM1-204ENST00000492511 GNAT2P19087 354 aa8.62□□□□□ -1.03
PDLIM1-204ENST00000492511 MTMR2Q13614 643 aa8.62□□□□□ -1.03
PDLIM1-204ENST00000492511 SEPT2Q15019 361 aa8.62□□□□□ -1.03
PDLIM1-204ENST00000492511 LRRFIP1Q32MZ4 808 aaKnown RBP8.62□□□□□ -1.03
PDLIM1-204ENST00000492511 VPS53Q5VIR6 699 aa8.62□□□□□ -1.03
PDLIM1-204ENST00000492511 PRPF38BQ5VTL8 546 aaKnown RBP8.62□□□□□ -1.03
PDLIM1-204ENST00000492511 POTEEQ6S8J3 1075 aa8.62□□□□□ -1.03
PDLIM1-204ENST00000492511 PROCA1Q8NCQ7 364 aaPredicted RBP8.62□□□□□ -1.03
PDLIM1-204ENST00000492511 CD99L2Q8TCZ2 262 aa8.62□□□□□ -1.03
PDLIM1-204ENST00000492511 RILPL2Q969X0 211 aa8.62□□□□□ -1.03
PDLIM1-204ENST00000492511 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.62□□□□□ -1.03
PDLIM1-204ENST00000492511 ARHGAP39Q9C0H5 1083 aa8.62□□□□□ -1.03
PDLIM1-204ENST00000492511 AS3MTQ9HBK9 375 aa8.62□□□□□ -1.03
PDLIM1-204ENST00000492511 HELLSQ9NRZ9 838 aa8.62□□□□□ -1.03
PDLIM1-204ENST00000492511 SWAP70Q9UH65 585 aa8.62□□□□□ -1.03
PDLIM1-204ENST00000492511 AGTPBP1Q9UPW5 1226 aa8.62□□□□□ -1.03
PDLIM1-204ENST00000492511 SLC45A1Q9Y2W3 748 aa8.62□□□□□ -1.03
PDLIM1-204ENST00000492511 TACC3Q9Y6A5 838 aa8.62□□□□□ -1.03
PDLIM1-204ENST00000492511 DOCK1Q14185 1865 aa8.62□□□□□ -1.03
PDLIM1-204ENST00000492511 C19orf81C9J6K1 198 aa8.61□□□□□ -1.03
PDLIM1-204ENST00000492511 SDSP20132 328 aa8.61□□□□□ -1.03
PDLIM1-204ENST00000492511 SOX10P56693 466 aa8.61□□□□□ -1.03
PDLIM1-204ENST00000492511 NMIQ13287 307 aaPredicted RBP8.61□□□□□ -1.03
PDLIM1-204ENST00000492511 RAB3GAP1Q15042 981 aa8.61□□□□□ -1.03
PDLIM1-204ENST00000492511 PKN2Q16513 984 aaKnown RBP8.61□□□□□ -1.03
PDLIM1-204ENST00000492511 KIAA1755Q5JYT7 1200 aa8.61□□□□□ -1.03
PDLIM1-204ENST00000492511 OTOP1Q7RTM1 612 aa8.61□□□□□ -1.03
PDLIM1-204ENST00000492511 ZNF589Q86UQ0 364 aaPredicted RBP8.61□□□□□ -1.03
PDLIM1-204ENST00000492511 TICAM2Q86XR7 235 aa8.61□□□□□ -1.03
PDLIM1-204ENST00000492511 STK11IPQ8N1F8 1099 aa8.61□□□□□ -1.03
PDLIM1-204ENST00000492511 CABP5Q9NP86 173 aa8.61□□□□□ -1.03
PDLIM1-204ENST00000492511 ARPP21Q9UBL0 812 aaPredicted RBP8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms