RNA–Protein interactions for RNA: ENST00000490471.1

CDCP1-203, Transcript of CUB domain containing protein 1, humanhuman

TSL 4

Gene CDCP1, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-203ENST00000490471 AMOTL1Q8IY63 956 aa13.78□□□□□ -0.2
CDCP1-203ENST00000490471 CWC22Q9HCG8 908 aaKnown RBP13.78□□□□□ -0.2
CDCP1-203ENST00000490471 TAOK2Q9UL54 1235 aa13.78□□□□□ -0.2
CDCP1-203ENST00000490471 ADGRA2Q96PE1 1338 aa13.78□□□□□ -0.2
CDCP1-203ENST00000490471 FLT1P17948 1338 aa13.77□□□□□ -0.21
CDCP1-203ENST00000490471 USP14P54578 494 aa13.77□□□□□ -0.21
CDCP1-203ENST00000490471 HMGCS2P54868 508 aa13.77□□□□□ -0.21
CDCP1-203ENST00000490471 BACE1P56817 501 aa13.77□□□□□ -0.21
CDCP1-203ENST00000490471 PRKCZQ05513 592 aa13.77□□□□□ -0.21
CDCP1-203ENST00000490471 MAST2Q6P0Q8 1798 aa13.77□□□□□ -0.21
CDCP1-203ENST00000490471 TRMT44Q8IYL2 757 aaKnown RBP13.77□□□□□ -0.21
CDCP1-203ENST00000490471 ANKRD13CQ8N6S4 541 aa13.77□□□□□ -0.21
CDCP1-203ENST00000490471 ZNF579Q8NAF0 562 aaKnown RBP13.77□□□□□ -0.21
CDCP1-203ENST00000490471 DDRGK1Q96HY6 314 aa13.77□□□□□ -0.21
CDCP1-203ENST00000490471 DBNLQ9UJU6 430 aaKnown RBP13.77□□□□□ -0.21
CDCP1-203ENST00000490471 GLRX3O76003 335 aaKnown RBP13.76□□□□□ -0.21
CDCP1-203ENST00000490471 CCL5P13501 91 aa13.76□□□□□ -0.21
CDCP1-203ENST00000490471 GJA8P48165 433 aa13.76□□□□□ -0.21
CDCP1-203ENST00000490471 FLT3LGP49771 235 aa13.76□□□□□ -0.21
CDCP1-203ENST00000490471 USP17L2Q6R6M4 530 aa13.76□□□□□ -0.21
CDCP1-203ENST00000490471 MAGEB6Q8N7X4 407 aa13.76□□□□□ -0.21
CDCP1-203ENST00000490471 RHPN1Q8TCX5 695 aa13.76□□□□□ -0.21
CDCP1-203ENST00000490471 ZNF384Q8TF68 577 aa13.76□□□□□ -0.21
CDCP1-203ENST00000490471 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.76□□□□□ -0.21
CDCP1-203ENST00000490471 DPF3Q92784 378 aa13.76□□□□□ -0.21
CDCP1-203ENST00000490471 EAF2Q96CJ1 260 aaPredicted RBP13.76□□□□□ -0.21
CDCP1-203ENST00000490471 CRNKL1Q9BZJ0 848 aaKnown RBP13.76□□□□□ -0.21
CDCP1-203ENST00000490471 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.76□□□□□ -0.21
CDCP1-203ENST00000490471 NR2E3Q9Y5X4 410 aa13.76□□□□□ -0.21
CDCP1-203ENST00000490471 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.76□□□□□ -0.21
CDCP1-203ENST00000490471 FAM196BA6NMK8 535 aa13.75□□□□□ -0.21
CDCP1-203ENST00000490471 POLR3DP05423 398 aaPredicted RBP13.75□□□□□ -0.21
CDCP1-203ENST00000490471 HOXA7P31268 230 aaPredicted RBP13.75□□□□□ -0.21
CDCP1-203ENST00000490471 PDE3AQ14432 1141 aa13.75□□□□□ -0.21
CDCP1-203ENST00000490471 METTL16Q86W50 562 aaKnown RBP13.75□□□□□ -0.21
CDCP1-203ENST00000490471 FEZ1Q99689 392 aa13.75□□□□□ -0.21
CDCP1-203ENST00000490471 SERPINB13Q9UIV8 391 aa13.75□□□□□ -0.21
CDCP1-203ENST00000490471 PALD1Q9ULE6 856 aa13.75□□□□□ -0.21
CDCP1-203ENST00000490471 EXOC6BQ9Y2D4 811 aa13.75□□□□□ -0.21
CDCP1-203ENST00000490471 MGAMO43451 1857 aa13.74□□□□□ -0.21
CDCP1-203ENST00000490471 MAGEB6P1A0A0J9YX57 407 aa13.74□□□□□ -0.21
CDCP1-203ENST00000490471 TFRCP02786 760 aaKnown RBP13.74□□□□□ -0.21
CDCP1-203ENST00000490471 RLBP1P12271 317 aa13.74□□□□□ -0.21
CDCP1-203ENST00000490471 CCNA1P78396 465 aa13.74□□□□□ -0.21
CDCP1-203ENST00000490471 ZSCAN25Q6NSZ9 544 aa13.74□□□□□ -0.21
CDCP1-203ENST00000490471 GPRC5AQ8NFJ5 357 aa13.74□□□□□ -0.21
CDCP1-203ENST00000490471 PANK1Q8TE04 598 aa13.74□□□□□ -0.21
CDCP1-203ENST00000490471 ASCC2Q9H1I8 757 aaPredicted RBP13.74□□□□□ -0.21
CDCP1-203ENST00000490471 EHD4Q9H223 541 aa13.74□□□□□ -0.21
CDCP1-203ENST00000490471 PIH1D3Q9NQM4 214 aaKnown RBP13.74□□□□□ -0.21
CDCP1-203ENST00000490471 SAP30BPQ9UHR5 308 aaKnown RBP13.74□□□□□ -0.21
CDCP1-203ENST00000490471 ATAD5Q96QE3 1844 aa13.74□□□□□ -0.21
CDCP1-203ENST00000490471 SGPL1O95470 568 aa13.73□□□□□ -0.21
CDCP1-203ENST00000490471 MAPK4P31152 587 aa13.73□□□□□ -0.21
CDCP1-203ENST00000490471 CAP1Q01518 475 aa13.73□□□□□ -0.21
CDCP1-203ENST00000490471 MTMR2Q13614 643 aa13.73□□□□□ -0.21
CDCP1-203ENST00000490471 CERKLQ49MI3 558 aaPredicted RBP13.73□□□□□ -0.21
CDCP1-203ENST00000490471 TREML2Q5T2D2 321 aa13.73□□□□□ -0.21
CDCP1-203ENST00000490471 SLC9C2Q5TAH2 1124 aa13.73□□□□□ -0.21
CDCP1-203ENST00000490471 MIGA1Q8NAN2 632 aa13.73□□□□□ -0.21
CDCP1-203ENST00000490471 SOCS4Q8WXH5 440 aa13.73□□□□□ -0.21
CDCP1-203ENST00000490471 NUDT12Q9BQG2 462 aa13.73□□□□□ -0.21
CDCP1-203ENST00000490471 RCAN3Q9UKA8 241 aa13.73□□□□□ -0.21
CDCP1-203ENST00000490471 ZBTB21Q9ULJ3 1066 aa13.73□□□□□ -0.21
CDCP1-203ENST00000490471 PDE4DIPQ5VU43 2346 aa13.73□□□□□ -0.21
CDCP1-203ENST00000490471 PHIPQ8WWQ0 1821 aa13.72□□□□□ -0.21
CDCP1-203ENST00000490471 CTGFP29279 349 aa13.72□□□□□ -0.21
CDCP1-203ENST00000490471 DYNLL1P63167 89 aaKnown RBP13.72□□□□□ -0.21
CDCP1-203ENST00000490471 MTFR1Q15390 333 aa13.72□□□□□ -0.21
CDCP1-203ENST00000490471 ABCB5Q2M3G0 1257 aa13.72□□□□□ -0.21
CDCP1-203ENST00000490471 U2AF1L4Q8WU68 220 aaKnown RBP13.72□□□□□ -0.21
CDCP1-203ENST00000490471 HMX1Q9NP08 348 aaPredicted RBP13.72□□□□□ -0.21
CDCP1-203ENST00000490471 IL1RAPL2Q9NP60 686 aa13.72□□□□□ -0.21
CDCP1-203ENST00000490471 MORF4L1Q9UBU8 362 aa13.72□□□□□ -0.21
CDCP1-203ENST00000490471 GABRQQ9UN88 632 aa13.72□□□□□ -0.21
CDCP1-203ENST00000490471 PTPRFP10586 1907 aa13.72□□□□□ -0.21
CDCP1-203ENST00000490471 USP17L15C9J2P7 530 aa13.71□□□□□ -0.21
CDCP1-203ENST00000490471 USP17L13C9JLJ4 530 aa13.71□□□□□ -0.21
CDCP1-203ENST00000490471 USP17L11C9JVI0 530 aa13.71□□□□□ -0.21
CDCP1-203ENST00000490471 USP17L18D6R9N7 530 aa13.71□□□□□ -0.21
CDCP1-203ENST00000490471 USP17L22D6RA61 530 aa13.71□□□□□ -0.21
CDCP1-203ENST00000490471 USP17L17D6RBQ6 530 aa13.71□□□□□ -0.21
CDCP1-203ENST00000490471 USP17L19D6RCP7 530 aa13.71□□□□□ -0.21
CDCP1-203ENST00000490471 USP17L20D6RJB6 530 aa13.71□□□□□ -0.21
CDCP1-203ENST00000490471 APBB1O00213 710 aa13.71□□□□□ -0.21
CDCP1-203ENST00000490471 GDF11O95390 407 aa13.71□□□□□ -0.21
CDCP1-203ENST00000490471 HMGCRP04035 888 aa13.71□□□□□ -0.21
CDCP1-203ENST00000490471 INHAP05111 366 aa13.71□□□□□ -0.21
CDCP1-203ENST00000490471 USP17L24Q0WX57 530 aa13.71□□□□□ -0.21
CDCP1-203ENST00000490471 RAB3GAP1Q15042 981 aa13.71□□□□□ -0.21
CDCP1-203ENST00000490471 LRRFIP1Q32MZ4 808 aaKnown RBP13.71□□□□□ -0.21
CDCP1-203ENST00000490471 CCDC84Q86UT8 332 aaPredicted RBP13.71□□□□□ -0.21
CDCP1-203ENST00000490471 GPATCH3Q96I76 525 aa13.71□□□□□ -0.21
CDCP1-203ENST00000490471 DNAJC2Q99543 621 aaKnown RBP13.71□□□□□ -0.21
CDCP1-203ENST00000490471 SH2D4AQ9H788 454 aa13.71□□□□□ -0.21
CDCP1-203ENST00000490471 TLR7Q9NYK1 1049 aaKnown RBP13.71□□□□□ -0.21
CDCP1-203ENST00000490471 SWAP70Q9UH65 585 aa13.71□□□□□ -0.21
CDCP1-203ENST00000490471 COG6Q9Y2V7 657 aa13.71□□□□□ -0.21
CDCP1-203ENST00000490471 FARP2O94887 1054 aaPredicted RBP13.7□□□□□ -0.22
CDCP1-203ENST00000490471 GH2P01242 217 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms