RNA–Protein interactions for RNA: ENST00000490112.1

UBP1-211, Transcript of upstream binding protein 1, humanhuman

TSL 5

Gene UBP1, Length 633 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1-211ENST00000490112 ADCY3O60266 1144 aa13.14□□□□□ -0.31
UBP1-211ENST00000490112 BAG3O95817 575 aa13.14□□□□□ -0.31
UBP1-211ENST00000490112 GCLCP48506 637 aaPredicted RBP13.14□□□□□ -0.31
UBP1-211ENST00000490112 FXR1P51114 621 aaKnown RBP eCLIP13.14□□□□□ -0.31
UBP1-211ENST00000490112 TMEM92Q6UXU6 159 aa13.14□□□□□ -0.31
UBP1-211ENST00000490112 ATF7IPQ6VMQ6 1270 aa13.14□□□□□ -0.31
UBP1-211ENST00000490112 SHISA4Q96DD7 197 aa13.14□□□□□ -0.31
UBP1-211ENST00000490112 DHX36Q9H2U1 1008 aaKnown RBP13.14□□□□□ -0.31
UBP1-211ENST00000490112 LRP2BPQ9P2M1 347 aa13.14□□□□□ -0.31
UBP1-211ENST00000490112 HERC5Q9UII4 1024 aaKnown RBP13.14□□□□□ -0.31
UBP1-211ENST00000490112 NR2E3Q9Y5X4 410 aa13.14□□□□□ -0.31
UBP1-211ENST00000490112 RANBP2P49792 3224 aaKnown RBP13.14□□□□□ -0.31
UBP1-211ENST00000490112 PTPRFP10586 1907 aa13.13□□□□□ -0.31
UBP1-211ENST00000490112 FLT3LGP49771 235 aa13.13□□□□□ -0.31
UBP1-211ENST00000490112 FAM110CQ1W6H9 321 aa13.13□□□□□ -0.31
UBP1-211ENST00000490112 UBE2Q1Q7Z7E8 422 aa13.13□□□□□ -0.31
UBP1-211ENST00000490112 ZNF280CQ8ND82 737 aa13.13□□□□□ -0.31
UBP1-211ENST00000490112 U2AF1L4Q8WU68 220 aaKnown RBP13.13□□□□□ -0.31
UBP1-211ENST00000490112 AS3MTQ9HBK9 375 aa13.13□□□□□ -0.31
UBP1-211ENST00000490112 GPR108Q9NPR9 543 aa13.13□□□□□ -0.31
UBP1-211ENST00000490112 PHIPQ8WWQ0 1821 aa13.13□□□□□ -0.31
UBP1-211ENST00000490112 SGPL1O95470 568 aa13.12□□□□□ -0.31
UBP1-211ENST00000490112 TRIM27P14373 513 aa13.12□□□□□ -0.31
UBP1-211ENST00000490112 CAP2P40123 477 aa13.12□□□□□ -0.31
UBP1-211ENST00000490112 CCDC158Q5M9N0 1113 aa13.12□□□□□ -0.31
UBP1-211ENST00000490112 GPR153Q6NV75 609 aa13.12□□□□□ -0.31
UBP1-211ENST00000490112 TEX11Q8IYF3 940 aa13.12□□□□□ -0.31
UBP1-211ENST00000490112 ZNF384Q8TF68 577 aa13.12□□□□□ -0.31
UBP1-211ENST00000490112 FRAT1Q92837 279 aaPredicted RBP13.12□□□□□ -0.31
UBP1-211ENST00000490112 GINM1Q9NU53 330 aa13.12□□□□□ -0.31
UBP1-211ENST00000490112 PI4KBQ9UBF8 816 aa13.12□□□□□ -0.31
UBP1-211ENST00000490112 GABRQQ9UN88 632 aa13.12□□□□□ -0.31
UBP1-211ENST00000490112 USP17L5A8MUK1 530 aa13.11□□□□□ -0.31
UBP1-211ENST00000490112 FARP2O94887 1054 aaPredicted RBP13.11□□□□□ -0.31
UBP1-211ENST00000490112 INHAP05111 366 aa13.11□□□□□ -0.31
UBP1-211ENST00000490112 MCAMP43121 646 aa13.11□□□□□ -0.31
UBP1-211ENST00000490112 SPP2Q13103 211 aa13.11□□□□□ -0.31
UBP1-211ENST00000490112 NAA16Q6N069 864 aaPredicted RBP13.11□□□□□ -0.31
UBP1-211ENST00000490112 TBC1D9Q6ZT07 1266 aa13.11□□□□□ -0.31
UBP1-211ENST00000490112 ANKRD13CQ8N6S4 541 aa13.11□□□□□ -0.31
UBP1-211ENST00000490112 UNC93B1Q9H1C4 597 aa13.11□□□□□ -0.31
UBP1-211ENST00000490112 PNMA6EA0A0J9YXQ4 647 aa13.1□□□□□ -0.31
UBP1-211ENST00000490112 TFRCP02786 760 aaKnown RBP13.1□□□□□ -0.31
UBP1-211ENST00000490112 ASNSP08243 561 aa13.1□□□□□ -0.31
UBP1-211ENST00000490112 PPP4CP60510 307 aa13.1□□□□□ -0.31
UBP1-211ENST00000490112 SH3D19Q5HYK7 790 aa13.1□□□□□ -0.31
UBP1-211ENST00000490112 TTC39AQ5SRH9 613 aa13.1□□□□□ -0.31
UBP1-211ENST00000490112 TREML2Q5T2D2 321 aa13.1□□□□□ -0.31
UBP1-211ENST00000490112 PI16Q6UXB8 463 aa13.1□□□□□ -0.31
UBP1-211ENST00000490112 CERS3Q8IU89 383 aa13.1□□□□□ -0.31
UBP1-211ENST00000490112 FOXP4Q8IVH2 680 aaPredicted RBP13.1□□□□□ -0.31
UBP1-211ENST00000490112 WDR18Q9BV38 432 aa13.1□□□□□ -0.31
UBP1-211ENST00000490112 TRIM34Q9BYJ4 488 aa13.1□□□□□ -0.31
UBP1-211ENST00000490112 SZT2Q5T011 3432 aa13.1□□□□□ -0.31
UBP1-211ENST00000490112 ELNP15502 786 aa13.09□□□□□ -0.31
UBP1-211ENST00000490112 HMGCS2P54868 508 aa13.09□□□□□ -0.31
UBP1-211ENST00000490112 OS9Q13438 667 aaPredicted RBP13.09□□□□□ -0.31
UBP1-211ENST00000490112 ZKSCAN2Q63HK3 967 aa13.09□□□□□ -0.31
UBP1-211ENST00000490112 SH3RF3Q8TEJ3 882 aaPredicted RBP13.09□□□□□ -0.31
UBP1-211ENST00000490112 ZNF512BQ96KM6 892 aaPredicted RBP13.09□□□□□ -0.31
UBP1-211ENST00000490112 PAK6Q9NQU5 681 aaPredicted RBP13.09□□□□□ -0.31
UBP1-211ENST00000490112 TMOD4Q9NZQ9 345 aa13.09□□□□□ -0.31
UBP1-211ENST00000490112 LOC285556D6RIA3 1793 aa13.09□□□□□ -0.31
UBP1-211ENST00000490112 TRIOBPQ9H2D6 2365 aa13.08□□□□□ -0.32
UBP1-211ENST00000490112 FAM196BA6NMK8 535 aa13.08□□□□□ -0.32
UBP1-211ENST00000490112 C19orf81C9J6K1 198 aa13.08□□□□□ -0.32
UBP1-211ENST00000490112 BCAR3O75815 825 aa13.08□□□□□ -0.32
UBP1-211ENST00000490112 SLURP2P0DP57 97 aa13.08□□□□□ -0.32
UBP1-211ENST00000490112 TNNI3KQ59H18 835 aa13.08□□□□□ -0.32
UBP1-211ENST00000490112 TMED8Q6PL24 325 aaPredicted RBP13.08□□□□□ -0.32
UBP1-211ENST00000490112 METTL16Q86W50 562 aaKnown RBP13.08□□□□□ -0.32
UBP1-211ENST00000490112 CRACR2BQ8N4Y2 399 aaPredicted RBP13.08□□□□□ -0.32
UBP1-211ENST00000490112 ANKLE1Q8NAG6 615 aa13.08□□□□□ -0.32
UBP1-211ENST00000490112 SSH3Q8TE77 659 aa13.08□□□□□ -0.32
UBP1-211ENST00000490112 CLUAP1Q96AJ1 413 aa13.08□□□□□ -0.32
UBP1-211ENST00000490112 DEFB118Q96PH6 123 aa13.08□□□□□ -0.32
UBP1-211ENST00000490112 ASCC2Q9H1I8 757 aaPredicted RBP13.08□□□□□ -0.32
UBP1-211ENST00000490112 AATFQ9NY61 560 aaKnown RBP eCLIP13.08□□□□□ -0.32
UBP1-211ENST00000490112 TAOK2Q9UL54 1235 aa13.08□□□□□ -0.32
UBP1-211ENST00000490112 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.08□□□□□ -0.32
UBP1-211ENST00000490112 FPGT-TNNI3KV9GXZ4 949 aa13.08□□□□□ -0.32
UBP1-211ENST00000490112 ATAD5Q96QE3 1844 aa13.08□□□□□ -0.32
UBP1-211ENST00000490112 A0A1W2PPC1 479 aa13.07□□□□□ -0.32
UBP1-211ENST00000490112 EVI5O60447 810 aa13.07□□□□□ -0.32
UBP1-211ENST00000490112 HMGCRP04035 888 aa13.07□□□□□ -0.32
UBP1-211ENST00000490112 HOXA7P31268 230 aaPredicted RBP13.07□□□□□ -0.32
UBP1-211ENST00000490112 BACE1P56817 501 aa13.07□□□□□ -0.32
UBP1-211ENST00000490112 IRX3P78415 501 aaPredicted RBP13.07□□□□□ -0.32
UBP1-211ENST00000490112 ATP8B2P98198 1209 aa13.07□□□□□ -0.32
UBP1-211ENST00000490112 CCDC84Q86UT8 332 aaPredicted RBP13.07□□□□□ -0.32
UBP1-211ENST00000490112 GTF3C2Q8WUA4 911 aaPredicted RBP13.07□□□□□ -0.32
UBP1-211ENST00000490112 TGFBRAP1Q8WUH2 860 aa13.07□□□□□ -0.32
UBP1-211ENST00000490112 CRISPLD2Q9H0B8 497 aa13.07□□□□□ -0.32
UBP1-211ENST00000490112 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.07□□□□□ -0.32
UBP1-211ENST00000490112 MORF4L1Q9UBU8 362 aa13.07□□□□□ -0.32
UBP1-211ENST00000490112 MAST2Q6P0Q8 1798 aa13.07□□□□□ -0.32
UBP1-211ENST00000490112 ZBTB7BO15156 539 aaPredicted RBP13.06□□□□□ -0.32
UBP1-211ENST00000490112 SURF6O75683 361 aaKnown RBP13.06□□□□□ -0.32
UBP1-211ENST00000490112 CYP2E1P05181 493 aaPredicted RBP13.06□□□□□ -0.32
UBP1-211ENST00000490112 HLA-DOAP06340 250 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms