RNA–Protein interactions for RNA: ENST00000490099.5

TMEM39A-210, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-210ENST00000490099 BACE1P56817 501 aa11.82□□□□□ -0.52
TMEM39A-210ENST00000490099 SLC9C1Q4G0N8 1177 aa11.82□□□□□ -0.52
TMEM39A-210ENST00000490099 SLC9C2Q5TAH2 1124 aa11.82□□□□□ -0.52
TMEM39A-210ENST00000490099 GADL1Q6ZQY3 521 aa11.82□□□□□ -0.52
TMEM39A-210ENST00000490099 MIGA1Q8NAN2 632 aa11.82□□□□□ -0.52
TMEM39A-210ENST00000490099 HAUS7Q99871 368 aa11.82□□□□□ -0.52
TMEM39A-210ENST00000490099 RBBP6Q7Z6E9 1792 aaKnown RBP11.82□□□□□ -0.52
TMEM39A-210ENST00000490099 ZSWIM8A7E2V4 1837 aa11.81□□□□□ -0.52
TMEM39A-210ENST00000490099 EN2P19622 333 aaPredicted RBP11.81□□□□□ -0.52
TMEM39A-210ENST00000490099 GCLCP48506 637 aaPredicted RBP11.81□□□□□ -0.52
TMEM39A-210ENST00000490099 FCGRTP55899 365 aa11.81□□□□□ -0.52
TMEM39A-210ENST00000490099 GABPAQ06546 454 aa11.81□□□□□ -0.52
TMEM39A-210ENST00000490099 IRF5Q13568 498 aa11.81□□□□□ -0.52
TMEM39A-210ENST00000490099 SHROOM1Q2M3G4 852 aaPredicted RBP11.81□□□□□ -0.52
TMEM39A-210ENST00000490099 DCTPP1Q9H773 170 aa11.81□□□□□ -0.52
TMEM39A-210ENST00000490099 AS3MTQ9HBK9 375 aa11.81□□□□□ -0.52
TMEM39A-210ENST00000490099 SAP30BPQ9UHR5 308 aaKnown RBP11.81□□□□□ -0.52
TMEM39A-210ENST00000490099 TAOK2Q9UL54 1235 aa11.81□□□□□ -0.52
TMEM39A-210ENST00000490099 ZBTB21Q9ULJ3 1066 aa11.81□□□□□ -0.52
TMEM39A-210ENST00000490099 GOLIM4O00461 696 aa11.8□□□□□ -0.52
TMEM39A-210ENST00000490099 FMNL1O95466 1100 aaPredicted RBP11.8□□□□□ -0.52
TMEM39A-210ENST00000490099 HLA-DOAP06340 250 aa11.8□□□□□ -0.52
TMEM39A-210ENST00000490099 ADD2P35612 726 aa11.8□□□□□ -0.52
TMEM39A-210ENST00000490099 PLCD1P51178 756 aa11.8□□□□□ -0.52
TMEM39A-210ENST00000490099 HMGCS2P54868 508 aa11.8□□□□□ -0.52
TMEM39A-210ENST00000490099 FAM110CQ1W6H9 321 aa11.8□□□□□ -0.52
TMEM39A-210ENST00000490099 PRPF38BQ5VTL8 546 aaKnown RBP11.8□□□□□ -0.52
TMEM39A-210ENST00000490099 TTC6Q86TZ1 520 aa11.8□□□□□ -0.52
TMEM39A-210ENST00000490099 SH3TC2Q8TF17 1288 aa11.8□□□□□ -0.52
TMEM39A-210ENST00000490099 EDC3Q96F86 508 aaKnown RBP11.8□□□□□ -0.52
TMEM39A-210ENST00000490099 ASCC2Q9H1I8 757 aaPredicted RBP11.8□□□□□ -0.52
TMEM39A-210ENST00000490099 EMILIN3Q9NT22 766 aa11.8□□□□□ -0.52
TMEM39A-210ENST00000490099 MORF4L1Q9UBU8 362 aa11.8□□□□□ -0.52
TMEM39A-210ENST00000490099 SERPINB13Q9UIV8 391 aa11.8□□□□□ -0.52
TMEM39A-210ENST00000490099 PNMA3Q9UL41 463 aa11.8□□□□□ -0.52
TMEM39A-210ENST00000490099 ZNF532Q9HCE3 1301 aa11.8□□□□□ -0.52
TMEM39A-210ENST00000490099 LOC285556D6RIA3 1793 aa11.79□□□□□ -0.52
TMEM39A-210ENST00000490099 MAGEB6P1A0A0J9YX57 407 aa11.79□□□□□ -0.52
TMEM39A-210ENST00000490099 APBB1O00213 710 aa11.79□□□□□ -0.52
TMEM39A-210ENST00000490099 SLC34A2O95436 690 aa11.79□□□□□ -0.52
TMEM39A-210ENST00000490099 GRK4P32298 578 aa11.79□□□□□ -0.52
TMEM39A-210ENST00000490099 SHMT1P34896 483 aa11.79□□□□□ -0.52
TMEM39A-210ENST00000490099 USP5P45974 858 aa11.79□□□□□ -0.52
TMEM39A-210ENST00000490099 PRKCZQ05513 592 aa11.79□□□□□ -0.52
TMEM39A-210ENST00000490099 PABPC4Q13310 644 aaKnown RBP eCLIP11.79□□□□□ -0.52
TMEM39A-210ENST00000490099 MTMR2Q13614 643 aa11.79□□□□□ -0.52
TMEM39A-210ENST00000490099 POTEEQ6S8J3 1075 aa11.79□□□□□ -0.52
TMEM39A-210ENST00000490099 CRACR2BQ8N4Y2 399 aaPredicted RBP11.79□□□□□ -0.52
TMEM39A-210ENST00000490099 ANKRD13CQ8N6S4 541 aa11.79□□□□□ -0.52
TMEM39A-210ENST00000490099 PXYLP1Q8TE99 480 aa11.79□□□□□ -0.52
TMEM39A-210ENST00000490099 SMCR8Q8TEV9 937 aaPredicted RBP11.79□□□□□ -0.52
TMEM39A-210ENST00000490099 C12orf42Q96LP6 360 aa11.79□□□□□ -0.52
TMEM39A-210ENST00000490099 TMEM106CQ9BVX2 250 aa11.79□□□□□ -0.52
TMEM39A-210ENST00000490099 LRRCC1Q9C099 1032 aa11.79□□□□□ -0.52
TMEM39A-210ENST00000490099 BOLA2Q9H3K6 86 aa11.79□□□□□ -0.52
TMEM39A-210ENST00000490099 PAG1Q9NWQ8 432 aa11.79□□□□□ -0.52
TMEM39A-210ENST00000490099 GJD2Q9UKL4 321 aa11.79□□□□□ -0.52
TMEM39A-210ENST00000490099 GABRQQ9UN88 632 aa11.79□□□□□ -0.52
TMEM39A-210ENST00000490099 MYPNQ86TC9 1320 aa11.79□□□□□ -0.52
TMEM39A-210ENST00000490099 DOCK3Q8IZD9 2030 aa11.79□□□□□ -0.52
TMEM39A-210ENST00000490099 CENPFP49454 3210 aa11.79□□□□□ -0.52
TMEM39A-210ENST00000490099 USP17L10C9JJH3 530 aa11.78□□□□□ -0.52
TMEM39A-210ENST00000490099 GH2P01242 217 aa11.78□□□□□ -0.52
TMEM39A-210ENST00000490099 FLT3LGP49771 235 aa11.78□□□□□ -0.52
TMEM39A-210ENST00000490099 UBE3CQ15386 1083 aa11.78□□□□□ -0.52
TMEM39A-210ENST00000490099 UBE2Q1Q7Z7E8 422 aa11.78□□□□□ -0.52
TMEM39A-210ENST00000490099 CRNKL1Q9BZJ0 848 aaKnown RBP11.78□□□□□ -0.52
TMEM39A-210ENST00000490099 KIAA1683Q9H0B3 1180 aa11.78□□□□□ -0.52
TMEM39A-210ENST00000490099 DCP1AQ9NPI6 582 aaPredicted RBP11.78□□□□□ -0.52
TMEM39A-210ENST00000490099 ATAD5Q96QE3 1844 aa11.77□□□□□ -0.52
TMEM39A-210ENST00000490099 GDF11O95390 407 aa11.77□□□□□ -0.53
TMEM39A-210ENST00000490099 GJB1P08034 283 aa11.77□□□□□ -0.53
TMEM39A-210ENST00000490099 GUCY1A2P33402 732 aa11.77□□□□□ -0.53
TMEM39A-210ENST00000490099 MTFR1Q15390 333 aa11.77□□□□□ -0.53
TMEM39A-210ENST00000490099 CERKLQ49MI3 558 aaPredicted RBP11.77□□□□□ -0.53
TMEM39A-210ENST00000490099 LCORLQ8N3X6 602 aa11.77□□□□□ -0.53
TMEM39A-210ENST00000490099 SLAIN1Q8ND83 568 aa11.77□□□□□ -0.53
TMEM39A-210ENST00000490099 RAET1EQ8TD07 263 aa11.77□□□□□ -0.53
TMEM39A-210ENST00000490099 DNAJC2Q99543 621 aaKnown RBP11.77□□□□□ -0.53
TMEM39A-210ENST00000490099 P2RX7Q99572 595 aaKnown RBP11.77□□□□□ -0.53
TMEM39A-210ENST00000490099 ECHDC1Q9NTX5 307 aa11.77□□□□□ -0.53
TMEM39A-210ENST00000490099 RBPJLQ9UBG7 517 aa11.77□□□□□ -0.53
TMEM39A-210ENST00000490099 PCDHB15Q9Y5E8 787 aa11.77□□□□□ -0.53
TMEM39A-210ENST00000490099 MYH1P12882 1939 aa11.77□□□□□ -0.53
TMEM39A-210ENST00000490099 MGAMO43451 1857 aa11.76□□□□□ -0.53
TMEM39A-210ENST00000490099 TNPO2O14787 897 aaKnown RBP11.76□□□□□ -0.53
TMEM39A-210ENST00000490099 SMARCA5O60264 1052 aaPredicted RBP11.76□□□□□ -0.53
TMEM39A-210ENST00000490099 ADCY3O60266 1144 aa11.76□□□□□ -0.53
TMEM39A-210ENST00000490099 EVX2Q03828 476 aa11.76□□□□□ -0.53
TMEM39A-210ENST00000490099 SLFNL1Q499Z3 407 aa11.76□□□□□ -0.53
TMEM39A-210ENST00000490099 USP17L2Q6R6M4 530 aa11.76□□□□□ -0.53
TMEM39A-210ENST00000490099 SHISA4Q96DD7 197 aa11.76□□□□□ -0.53
TMEM39A-210ENST00000490099 TRIM34Q9BYJ4 488 aa11.76□□□□□ -0.53
TMEM39A-210ENST00000490099 ATP8A2Q9NTI2 1148 aa11.76□□□□□ -0.53
TMEM39A-210ENST00000490099 TMOD4Q9NZQ9 345 aa11.76□□□□□ -0.53
TMEM39A-210ENST00000490099 DDX60LQ5H9U9 1706 aaKnown RBP11.76□□□□□ -0.53
TMEM39A-210ENST00000490099 MKI67P46013 3256 aaKnown RBP11.75□□□□□ -0.53
TMEM39A-210ENST00000490099 PRKAB2O43741 272 aa11.75□□□□□ -0.53
TMEM39A-210ENST00000490099 ECM2O94769 699 aaPredicted RBP11.75□□□□□ -0.53
TMEM39A-210ENST00000490099 CHGBP05060 677 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms