RNA–Protein interactions for RNA: ENST00000489485.5

CLDN11-209, Transcript of claudin 11, humanhuman

TSL 2

Gene CLDN11, Length 1,854 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-209ENST00000489485 RBM19Q9Y4C8 960 aaKnown RBP16.84■□□□□ 0.29
CLDN11-209ENST00000489485 PHF20L1A8MW92 1017 aa16.84■□□□□ 0.29
CLDN11-209ENST00000489485 B4E1Z4 1266 aa16.84■□□□□ 0.29
CLDN11-209ENST00000489485 FGRP09769 529 aa16.84■□□□□ 0.29
CLDN11-209ENST00000489485 RASA1P20936 1047 aa16.84■□□□□ 0.29
CLDN11-209ENST00000489485 INPP5BP32019 993 aa16.84■□□□□ 0.29
CLDN11-209ENST00000489485 RALYLQ86SE5 291 aaKnown RBP16.84■□□□□ 0.29
CLDN11-209ENST00000489485 ZKSCAN4Q969J2 545 aaPredicted RBP16.84■□□□□ 0.29
CLDN11-209ENST00000489485 KRT23Q9C075 422 aa16.84■□□□□ 0.29
CLDN11-209ENST00000489485 CNNM2Q9H8M5 875 aa16.84■□□□□ 0.29
CLDN11-209ENST00000489485 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.84■□□□□ 0.29
CLDN11-209ENST00000489485 TSPY2A6NKD2 308 aa16.83■□□□□ 0.28
CLDN11-209ENST00000489485 ORC4O43929 436 aa16.83■□□□□ 0.28
CLDN11-209ENST00000489485 KRT32Q14532 448 aa16.83■□□□□ 0.28
CLDN11-209ENST00000489485 RRP1BQ14684 758 aaKnown RBP16.83■□□□□ 0.28
CLDN11-209ENST00000489485 TSGA10IPQ3SY00 556 aa16.83■□□□□ 0.28
CLDN11-209ENST00000489485 FAM47AQ5JRC9 791 aa16.83■□□□□ 0.28
CLDN11-209ENST00000489485 NCOA7Q8NI08 942 aa16.83■□□□□ 0.28
CLDN11-209ENST00000489485 ESR2Q92731 530 aa16.83■□□□□ 0.28
CLDN11-209ENST00000489485 ANP32EQ9BTT0 268 aa16.83■□□□□ 0.28
CLDN11-209ENST00000489485 UBE2Q2LH0YL09 131 aa16.82■□□□□ 0.28
CLDN11-209ENST00000489485 CTNND1O60716 968 aaKnown RBP16.82■□□□□ 0.28
CLDN11-209ENST00000489485 KDM4AO75164 1064 aa16.82■□□□□ 0.28
CLDN11-209ENST00000489485 TSPY3P0CV98 308 aa16.82■□□□□ 0.28
CLDN11-209ENST00000489485 TSPY8P0CW00 308 aa16.82■□□□□ 0.28
CLDN11-209ENST00000489485 AKR1B1P15121 316 aa16.82■□□□□ 0.28
CLDN11-209ENST00000489485 CAP2P40123 477 aa16.82■□□□□ 0.28
CLDN11-209ENST00000489485 TFAP4Q01664 338 aa16.82■□□□□ 0.28
CLDN11-209ENST00000489485 ABCB5Q2M3G0 1257 aa16.82■□□□□ 0.28
CLDN11-209ENST00000489485 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.82■□□□□ 0.28
CLDN11-209ENST00000489485 JAKMIP1Q96N16 626 aaKnown RBP16.82■□□□□ 0.28
CLDN11-209ENST00000489485 CABP5Q9NP86 173 aa16.82■□□□□ 0.28
CLDN11-209ENST00000489485 ZNF112Q9UJU3 913 aa16.82■□□□□ 0.28
CLDN11-209ENST00000489485 ATAD5Q96QE3 1844 aa16.82■□□□□ 0.28
CLDN11-209ENST00000489485 OTOFQ9HC10 1997 aa16.82■□□□□ 0.28
CLDN11-209ENST00000489485 PAPPA2Q9BXP8 1791 aa16.82■□□□□ 0.28
CLDN11-209ENST00000489485 FKBP1BP68106 108 aa16.82■□□□□ 0.28
CLDN11-209ENST00000489485 MAP3K9P80192 1104 aa16.82■□□□□ 0.28
CLDN11-209ENST00000489485 SHROOM1Q2M3G4 852 aaPredicted RBP16.82■□□□□ 0.28
CLDN11-209ENST00000489485 CCDC17Q96LX7 622 aa16.82■□□□□ 0.28
CLDN11-209ENST00000489485 CSADQ9Y600 493 aa16.82■□□□□ 0.28
CLDN11-209ENST00000489485 GH2P01242 217 aa16.81■□□□□ 0.28
CLDN11-209ENST00000489485 COL9A3Q14050 684 aaPredicted RBP16.81■□□□□ 0.28
CLDN11-209ENST00000489485 RAB3GAP1Q15042 981 aa16.81■□□□□ 0.28
CLDN11-209ENST00000489485 MAP3K11Q16584 847 aa16.81■□□□□ 0.28
CLDN11-209ENST00000489485 ANKRD13AQ8IZ07 590 aa16.81■□□□□ 0.28
CLDN11-209ENST00000489485 NKX2-3Q8TAU0 364 aa16.81■□□□□ 0.28
CLDN11-209ENST00000489485 NEK1Q96PY6 1258 aa16.81■□□□□ 0.28
CLDN11-209ENST00000489485 UPF3BQ9BZI7 483 aaKnown RBP16.81■□□□□ 0.28
CLDN11-209ENST00000489485 ZSWIM5Q9P217 1185 aa16.81■□□□□ 0.28
CLDN11-209ENST00000489485 CASTP20810 708 aaKnown RBP16.8■□□□□ 0.28
CLDN11-209ENST00000489485 VGLL4Q14135 290 aa16.8■□□□□ 0.28
CLDN11-209ENST00000489485 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.8■□□□□ 0.28
CLDN11-209ENST00000489485 DOCK1Q14185 1865 aa16.8■□□□□ 0.28
CLDN11-209ENST00000489485 ASNSP08243 561 aa16.8■□□□□ 0.28
CLDN11-209ENST00000489485 CPA1P15085 419 aa16.8■□□□□ 0.28
CLDN11-209ENST00000489485 PSMA5P28066 241 aa16.8■□□□□ 0.28
CLDN11-209ENST00000489485 JAG1P78504 1218 aa16.8■□□□□ 0.28
CLDN11-209ENST00000489485 CHST3Q7LGC8 479 aa16.8■□□□□ 0.28
CLDN11-209ENST00000489485 SCYL3Q8IZE3 742 aa16.8■□□□□ 0.28
CLDN11-209ENST00000489485 IL17RAQ96F46 866 aa16.8■□□□□ 0.28
CLDN11-209ENST00000489485 CLMNQ96JQ2 1002 aa16.8■□□□□ 0.28
CLDN11-209ENST00000489485 ZKSCAN3Q9BRR0 538 aa16.8■□□□□ 0.28
CLDN11-209ENST00000489485 PICK1Q9NRD5 415 aa16.8■□□□□ 0.28
CLDN11-209ENST00000489485 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.8■□□□□ 0.28
CLDN11-209ENST00000489485 ZBTB21Q9ULJ3 1066 aa16.8■□□□□ 0.28
CLDN11-209ENST00000489485 TMEM88BA6NKF7 163 aa16.79■□□□□ 0.28
CLDN11-209ENST00000489485 HUNKP57058 714 aa16.79■□□□□ 0.28
CLDN11-209ENST00000489485 TMEM179Q6ZVK1 233 aa16.79■□□□□ 0.28
CLDN11-209ENST00000489485 IQCA1Q86XH1 822 aa16.79■□□□□ 0.28
CLDN11-209ENST00000489485 NMT2O60551 498 aa16.78■□□□□ 0.28
CLDN11-209ENST00000489485 MCM5P33992 734 aa16.78■□□□□ 0.28
CLDN11-209ENST00000489485 NEK4P51957 841 aa16.78■□□□□ 0.28
CLDN11-209ENST00000489485 SEPT2Q15019 361 aa16.78■□□□□ 0.28
CLDN11-209ENST00000489485 LDLRAD1Q5T700 205 aa16.78■□□□□ 0.28
CLDN11-209ENST00000489485 BLOC1S2Q6QNY1 142 aa16.78■□□□□ 0.28
CLDN11-209ENST00000489485 CYB5R4Q7L1T6 521 aa16.78■□□□□ 0.28
CLDN11-209ENST00000489485 MB21D2Q8IYB1 491 aaPredicted RBP16.78■□□□□ 0.28
CLDN11-209ENST00000489485 NEDD1Q8NHV4 660 aa16.78■□□□□ 0.28
CLDN11-209ENST00000489485 ELP3Q9H9T3 547 aa16.78■□□□□ 0.28
CLDN11-209ENST00000489485 ABT1Q9ULW3 272 aaKnown RBP16.78■□□□□ 0.28
CLDN11-209ENST00000489485 HMGB1P09429 215 aaKnown RBP16.78■□□□□ 0.28
CLDN11-209ENST00000489485 NT5C2P49902 561 aa16.78■□□□□ 0.28
CLDN11-209ENST00000489485 RABEP1Q15276 862 aa16.78■□□□□ 0.28
CLDN11-209ENST00000489485 SAPCD2Q86UD0 394 aa16.78■□□□□ 0.28
CLDN11-209ENST00000489485 CCDC84Q86UT8 332 aaPredicted RBP16.78■□□□□ 0.28
CLDN11-209ENST00000489485 UBAC1Q9BSL1 405 aa16.78■□□□□ 0.28
CLDN11-209ENST00000489485 TM6SF1Q9BZW5 370 aa16.78■□□□□ 0.28
CLDN11-209ENST00000489485 ZSWIM6Q9HCJ5 1215 aa16.78■□□□□ 0.28
CLDN11-209ENST00000489485 SNCAIPQ9Y6H5 919 aa16.78■□□□□ 0.28
CLDN11-209ENST00000489485 ATP2B2Q01814 1243 aa16.77■□□□□ 0.27
CLDN11-209ENST00000489485 NOL9Q5SY16 702 aaKnown RBP16.77■□□□□ 0.27
CLDN11-209ENST00000489485 RUFY3Q7L099 469 aa16.77■□□□□ 0.27
CLDN11-209ENST00000489485 CLEC10AQ8IUN9 316 aa16.77■□□□□ 0.27
CLDN11-209ENST00000489485 SLC10A4Q96EP9 437 aa16.77■□□□□ 0.27
CLDN11-209ENST00000489485 CEP95Q96GE4 821 aa16.77■□□□□ 0.27
CLDN11-209ENST00000489485 TCEANC2Q96MN5 208 aa16.77■□□□□ 0.27
CLDN11-209ENST00000489485 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.77■□□□□ 0.27
CLDN11-209ENST00000489485 IL17RBQ9NRM6 502 aa16.77■□□□□ 0.27
CLDN11-209ENST00000489485 STX8Q9UNK0 236 aa16.77■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms