RNA–Protein interactions for RNA: ENST00000488946.1

RPL13A-212, Transcript of ribosomal protein L13a, humanhuman

TSL 2

Gene RPL13A, Length 2,312 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL13A-212ENST00000488946 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.39■□□□□ 0.21
RPL13A-212ENST00000488946 KLRG2A4D1S0 409 aaPredicted RBP16.38■□□□□ 0.21
RPL13A-212ENST00000488946 RIOK3O14730 519 aaKnown RBP16.38■□□□□ 0.21
RPL13A-212ENST00000488946 HOXA10P31260 410 aaPredicted RBP16.38■□□□□ 0.21
RPL13A-212ENST00000488946 CEBPZQ03701 1054 aaKnown RBP16.38■□□□□ 0.21
RPL13A-212ENST00000488946 WDR66Q8TBY9 1149 aa16.38■□□□□ 0.21
RPL13A-212ENST00000488946 PHKBQ93100 1093 aa16.38■□□□□ 0.21
RPL13A-212ENST00000488946 UBAC1Q9BSL1 405 aa16.38■□□□□ 0.21
RPL13A-212ENST00000488946 ATP8A2Q9NTI2 1148 aa16.38■□□□□ 0.21
RPL13A-212ENST00000488946 GJB4Q9NTQ9 266 aa16.38■□□□□ 0.21
RPL13A-212ENST00000488946 POLRMTO00411 1230 aaKnown RBP16.37■□□□□ 0.21
RPL13A-212ENST00000488946 RTN1Q16799 776 aa16.37■□□□□ 0.21
RPL13A-212ENST00000488946 KRT40Q6A162 431 aa16.37■□□□□ 0.21
RPL13A-212ENST00000488946 ZNF804AQ7Z570 1209 aa16.37■□□□□ 0.21
RPL13A-212ENST00000488946 CCDC144CPQ8IYA2 1237 aa16.37■□□□□ 0.21
RPL13A-212ENST00000488946 FAM200AQ8TCP9 573 aa16.37■□□□□ 0.21
RPL13A-212ENST00000488946 RBM17Q96I25 401 aaKnown RBP16.37■□□□□ 0.21
RPL13A-212ENST00000488946 AIFM3Q96NN9 605 aa16.37■□□□□ 0.21
RPL13A-212ENST00000488946 TRIM34Q9BYJ4 488 aa16.37■□□□□ 0.21
RPL13A-212ENST00000488946 DCP1AQ9NPI6 582 aaPredicted RBP16.37■□□□□ 0.21
RPL13A-212ENST00000488946 TNKSO95271 1327 aa16.37■□□□□ 0.21
RPL13A-212ENST00000488946 NAV1Q8NEY1 1877 aa16.37■□□□□ 0.21
RPL13A-212ENST00000488946 SMIM22K7EJ46 135 aa16.37■□□□□ 0.21
RPL13A-212ENST00000488946 ORC4O43929 436 aa16.37■□□□□ 0.21
RPL13A-212ENST00000488946 GPSM2P81274 684 aa16.37■□□□□ 0.21
RPL13A-212ENST00000488946 SBK1Q52WX2 424 aa16.37■□□□□ 0.21
RPL13A-212ENST00000488946 ZNF654Q8IZM8 581 aa16.37■□□□□ 0.21
RPL13A-212ENST00000488946 NLGN1Q8N2Q7 840 aa16.37■□□□□ 0.21
RPL13A-212ENST00000488946 LINC00301Q8NCQ3 95 aa16.37■□□□□ 0.21
RPL13A-212ENST00000488946 ZKSCAN3Q9BRR0 538 aa16.37■□□□□ 0.21
RPL13A-212ENST00000488946 A0A1W2PQ27 194 aa16.36■□□□□ 0.21
RPL13A-212ENST00000488946 A0A1W2PQ64 194 aa16.36■□□□□ 0.21
RPL13A-212ENST00000488946 A0A1W2PQD8 194 aa16.36■□□□□ 0.21
RPL13A-212ENST00000488946 SSRP1Q08945 709 aaKnown RBP16.36■□□□□ 0.21
RPL13A-212ENST00000488946 KCNG4Q8TDN1 519 aa16.36■□□□□ 0.21
RPL13A-212ENST00000488946 WASF1Q92558 559 aa16.36■□□□□ 0.21
RPL13A-212ENST00000488946 TSPYL1Q9H0U9 437 aa16.36■□□□□ 0.21
RPL13A-212ENST00000488946 YY1AP1Q9H869 796 aa16.36■□□□□ 0.21
RPL13A-212ENST00000488946 AATFQ9NY61 560 aaKnown RBP eCLIP16.36■□□□□ 0.211e-37■■□□□ 13.1
RPL13A-212ENST00000488946 ARPP21Q9UBL0 812 aaPredicted RBP16.36■□□□□ 0.21
RPL13A-212ENST00000488946 DDX60LQ5H9U9 1706 aaKnown RBP16.36■□□□□ 0.21
RPL13A-212ENST00000488946 CYP2D7A0A087X1C5 515 aa16.36■□□□□ 0.21
RPL13A-212ENST00000488946 CCDC196A0A1B0GTZ2 297 aa16.36■□□□□ 0.21
RPL13A-212ENST00000488946 ATP2B4P23634 1241 aa16.36■□□□□ 0.21
RPL13A-212ENST00000488946 POLD1P28340 1107 aa16.36■□□□□ 0.21
RPL13A-212ENST00000488946 TYRO3Q06418 890 aa16.36■□□□□ 0.21
RPL13A-212ENST00000488946 PPP2R5BQ15173 497 aa16.36■□□□□ 0.21
RPL13A-212ENST00000488946 MSL1Q68DK7 614 aa16.36■□□□□ 0.21
RPL13A-212ENST00000488946 NBPF11Q86T75 865 aa16.36■□□□□ 0.21
RPL13A-212ENST00000488946 DZIP1Q86YF9 867 aaKnown RBP16.36■□□□□ 0.21
RPL13A-212ENST00000488946 CCAR1Q8IX12 1150 aaKnown RBP16.36■□□□□ 0.21
RPL13A-212ENST00000488946 ENGASEQ8NFI3 743 aa16.36■□□□□ 0.21
RPL13A-212ENST00000488946 GOLPH3LQ9H4A5 285 aa16.36■□□□□ 0.21
RPL13A-212ENST00000488946 MRVI1Q9Y6F6 885 aa16.36■□□□□ 0.21
RPL13A-212ENST00000488946 CTIFO43310 598 aaKnown RBP16.35■□□□□ 0.21
RPL13A-212ENST00000488946 CAMK4Q16566 473 aa16.35■□□□□ 0.21
RPL13A-212ENST00000488946 CRAMP1Q96RY5 1269 aa16.35■□□□□ 0.21
RPL13A-212ENST00000488946 ZSCAN10Q96SZ4 725 aaPredicted RBP16.35■□□□□ 0.21
RPL13A-212ENST00000488946 MYH6P13533 1939 aa16.35■□□□□ 0.21
RPL13A-212ENST00000488946 CDK5RAP2Q96SN8 1893 aa16.35■□□□□ 0.21
RPL13A-212ENST00000488946 USP17L12C9JPN9 530 aa16.35■□□□□ 0.21
RPL13A-212ENST00000488946 USP17L21D6R901 530 aa16.35■□□□□ 0.21
RPL13A-212ENST00000488946 BBOX1O75936 387 aa16.35■□□□□ 0.21
RPL13A-212ENST00000488946 FAM160A1Q05DH4 1040 aa16.35■□□□□ 0.21
RPL13A-212ENST00000488946 SNW1Q13573 536 aaKnown RBP16.35■□□□□ 0.21
RPL13A-212ENST00000488946 ADALQ6DHV7 355 aa16.35■□□□□ 0.21
RPL13A-212ENST00000488946 ENAHQ8N8S7 591 aaPredicted RBP16.35■□□□□ 0.21
RPL13A-212ENST00000488946 SLC26A6Q9BXS9 759 aa16.35■□□□□ 0.21
RPL13A-212ENST00000488946 PCDHA7Q9UN72 937 aa16.35■□□□□ 0.21
RPL13A-212ENST00000488946 CLIC4Q9Y696 253 aa16.35■□□□□ 0.21
RPL13A-212ENST00000488946 ROBO3Q96MS0 1386 aa16.34■□□□□ 0.21
RPL13A-212ENST00000488946 POLR3DP05423 398 aaPredicted RBP16.34■□□□□ 0.21
RPL13A-212ENST00000488946 LDHBP07195 334 aaKnown RBP16.34■□□□□ 0.21
RPL13A-212ENST00000488946 PTGS1P23219 599 aa16.34■□□□□ 0.21
RPL13A-212ENST00000488946 ME1P48163 572 aa16.34■□□□□ 0.21
RPL13A-212ENST00000488946 PSEN1P49768 467 aa16.34■□□□□ 0.21
RPL13A-212ENST00000488946 NT5C2P49902 561 aa16.34■□□□□ 0.21
RPL13A-212ENST00000488946 ANO1Q5XXA6 986 aa16.34■□□□□ 0.21
RPL13A-212ENST00000488946 CCDC73Q6ZRK6 1079 aa16.34■□□□□ 0.21
RPL13A-212ENST00000488946 STK11IPQ8N1F8 1099 aa16.34■□□□□ 0.21
RPL13A-212ENST00000488946 FANCBQ8NB91 859 aa16.34■□□□□ 0.21
RPL13A-212ENST00000488946 CALCOCO1Q9P1Z2 691 aa16.34■□□□□ 0.21
RPL13A-212ENST00000488946 CTAGE5O15320 804 aa16.34■□□□□ 0.21
RPL13A-212ENST00000488946 IL1R1P14778 569 aa16.34■□□□□ 0.21
RPL13A-212ENST00000488946 PTGER2P43116 358 aa16.34■□□□□ 0.21
RPL13A-212ENST00000488946 GSTO1P78417 241 aa16.34■□□□□ 0.21
RPL13A-212ENST00000488946 STK38Q15208 465 aa16.34■□□□□ 0.21
RPL13A-212ENST00000488946 TMC4Q7Z404 712 aa16.34■□□□□ 0.21
RPL13A-212ENST00000488946 TRIM22Q8IYM9 498 aa16.34■□□□□ 0.21
RPL13A-212ENST00000488946 MRPS27Q92552 414 aaKnown RBP16.34■□□□□ 0.21
RPL13A-212ENST00000488946 MKRN1Q9UHC7 482 aaKnown RBP16.34■□□□□ 0.21
RPL13A-212ENST00000488946 UFL1O94874 794 aa16.33■□□□□ 0.2
RPL13A-212ENST00000488946 TRIM29Q14134 588 aa16.33■□□□□ 0.2
RPL13A-212ENST00000488946 LUZP1Q86V48 1076 aa16.33■□□□□ 0.2
RPL13A-212ENST00000488946 CKAP2LQ8IYA6 745 aa16.33■□□□□ 0.2
RPL13A-212ENST00000488946 CRACR2BQ8N4Y2 399 aaPredicted RBP16.33■□□□□ 0.2
RPL13A-212ENST00000488946 GEMIN8Q9NWZ8 242 aaKnown RBP16.33■□□□□ 0.2
RPL13A-212ENST00000488946 GGA1Q9UJY5 639 aa16.33■□□□□ 0.2
RPL13A-212ENST00000488946 JAG2Q9Y219 1238 aa16.33■□□□□ 0.2
RPL13A-212ENST00000488946 SPTLC2O15270 562 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms