RNA–Protein interactions for RNA: ENST00000488774.1

PTPRD-212, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 3

Gene PTPRD, Length 420 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-212ENST00000488774 BAG3O95817 575 aa7.86□□□□□ -1.15
PTPRD-212ENST00000488774 CAP2P40123 477 aa7.86□□□□□ -1.15
PTPRD-212ENST00000488774 ECE1P42892 770 aa7.86□□□□□ -1.15
PTPRD-212ENST00000488774 USP5P45974 858 aa7.86□□□□□ -1.15
PTPRD-212ENST00000488774 TREML2Q5T2D2 321 aa7.86□□□□□ -1.15
PTPRD-212ENST00000488774 TTC22Q5TAA0 569 aa7.86□□□□□ -1.15
PTPRD-212ENST00000488774 C12orf60Q5U649 245 aa7.86□□□□□ -1.15
PTPRD-212ENST00000488774 TATDN1Q6P1N9 297 aa7.86□□□□□ -1.15
PTPRD-212ENST00000488774 RASGRP2Q7LDG7 609 aa7.86□□□□□ -1.15
PTPRD-212ENST00000488774 IFNL1Q8IU54 200 aa7.86□□□□□ -1.15
PTPRD-212ENST00000488774 SCYL3Q8IZE3 742 aa7.86□□□□□ -1.15
PTPRD-212ENST00000488774 ACER1Q8TDN7 264 aa7.86□□□□□ -1.15
PTPRD-212ENST00000488774 CCDC102AQ96A19 550 aa7.86□□□□□ -1.15
PTPRD-212ENST00000488774 MCM9Q9NXL9 1143 aa7.86□□□□□ -1.15
PTPRD-212ENST00000488774 KCNH4Q9UQ05 1017 aa7.86□□□□□ -1.15
PTPRD-212ENST00000488774 BAZ2BQ9UIF8 2168 aaKnown RBP7.86□□□□□ -1.15
PTPRD-212ENST00000488774 MCM3APO60318 1980 aa7.85□□□□□ -1.15
PTPRD-212ENST00000488774 CCL15-CCL14A0A0B4J2E2 113 aa7.85□□□□□ -1.15
PTPRD-212ENST00000488774 ECM2O94769 699 aaPredicted RBP7.85□□□□□ -1.15
PTPRD-212ENST00000488774 GH2P01242 217 aa7.85□□□□□ -1.15
PTPRD-212ENST00000488774 AKR1B1P15121 316 aa7.85□□□□□ -1.15
PTPRD-212ENST00000488774 CTDSPL2Q05D32 466 aa7.85□□□□□ -1.15
PTPRD-212ENST00000488774 CRHR2Q13324 411 aa7.85□□□□□ -1.15
PTPRD-212ENST00000488774 PPIL2Q13356 520 aa7.85□□□□□ -1.15
PTPRD-212ENST00000488774 CCL15Q16663 113 aa7.85□□□□□ -1.15
PTPRD-212ENST00000488774 ERO1BQ86YB8 467 aa7.85□□□□□ -1.15
PTPRD-212ENST00000488774 RILPL2Q969X0 211 aa7.85□□□□□ -1.15
PTPRD-212ENST00000488774 CRNKL1Q9BZJ0 848 aaKnown RBP7.85□□□□□ -1.15
PTPRD-212ENST00000488774 ARHGAP39Q9C0H5 1083 aa7.85□□□□□ -1.15
PTPRD-212ENST00000488774 PI4KBQ9UBF8 816 aa7.85□□□□□ -1.15
PTPRD-212ENST00000488774 ZBTB21Q9ULJ3 1066 aa7.85□□□□□ -1.15
PTPRD-212ENST00000488774 ZHX2Q9Y6X8 837 aa7.85□□□□□ -1.15
PTPRD-212ENST00000488774 PLXNA1Q9UIW2 1896 aa7.85□□□□□ -1.15
PTPRD-212ENST00000488774 TRIM75PA6NK02 468 aa7.84□□□□□ -1.15
PTPRD-212ENST00000488774 TRIM6-TRIM34B2RNG4 842 aa7.84□□□□□ -1.15
PTPRD-212ENST00000488774 ERC2O15083 957 aa7.84□□□□□ -1.15
PTPRD-212ENST00000488774 CTNND1O60716 968 aaKnown RBP7.84□□□□□ -1.15
PTPRD-212ENST00000488774 PRDM1O75626 825 aa7.84□□□□□ -1.15
PTPRD-212ENST00000488774 ZBTB48P10074 688 aaPredicted RBP7.84□□□□□ -1.15
PTPRD-212ENST00000488774 PLCG2P16885 1265 aa7.84□□□□□ -1.15
PTPRD-212ENST00000488774 CDK8P49336 464 aa7.84□□□□□ -1.15
PTPRD-212ENST00000488774 SPP2Q13103 211 aa7.84□□□□□ -1.15
PTPRD-212ENST00000488774 SEPT2Q15019 361 aa7.84□□□□□ -1.15
PTPRD-212ENST00000488774 DCAF15Q66K64 600 aa7.84□□□□□ -1.15
PTPRD-212ENST00000488774 IFNL3Q8IZI9 196 aa7.84□□□□□ -1.15
PTPRD-212ENST00000488774 AIDAQ96BJ3 306 aa7.84□□□□□ -1.15
PTPRD-212ENST00000488774 EVI5LQ96CN4 794 aa7.84□□□□□ -1.15
PTPRD-212ENST00000488774 GPATCH3Q96I76 525 aa7.84□□□□□ -1.15
PTPRD-212ENST00000488774 EMILIN3Q9NT22 766 aa7.84□□□□□ -1.15
PTPRD-212ENST00000488774 CSADQ9Y600 493 aa7.84□□□□□ -1.15
PTPRD-212ENST00000488774 ROBO3Q96MS0 1386 aa7.84□□□□□ -1.16
PTPRD-212ENST00000488774 FRMPD3Q5JV73 1810 aa7.83□□□□□ -1.16
PTPRD-212ENST00000488774 A0A0G2JLL6 359 aaPredicted RBP7.83□□□□□ -1.16
PTPRD-212ENST00000488774 NMT2O60551 498 aa7.83□□□□□ -1.16
PTPRD-212ENST00000488774 CYP2C8P10632 490 aa7.83□□□□□ -1.16
PTPRD-212ENST00000488774 HSPD1P10809 573 aaKnown RBP7.83□□□□□ -1.16
PTPRD-212ENST00000488774 RASA1P20936 1047 aa7.83□□□□□ -1.16
PTPRD-212ENST00000488774 HMGCS2P54868 508 aa7.83□□□□□ -1.16
PTPRD-212ENST00000488774 MAP2K1Q02750 393 aaPredicted RBP7.83□□□□□ -1.16
PTPRD-212ENST00000488774 PTH1RQ03431 593 aa7.83□□□□□ -1.16
PTPRD-212ENST00000488774 PPATQ06203 517 aa7.83□□□□□ -1.16
PTPRD-212ENST00000488774 CWC27Q6UX04 472 aaKnown RBP7.83□□□□□ -1.16
PTPRD-212ENST00000488774 C16orf86Q6ZW13 317 aa7.83□□□□□ -1.16
PTPRD-212ENST00000488774 PRRT2Q7Z6L0 340 aaPredicted RBP7.83□□□□□ -1.16
PTPRD-212ENST00000488774 TBC1D10CQ8IV04 446 aa7.83□□□□□ -1.16
PTPRD-212ENST00000488774 ZNF296Q8WUU4 475 aaPredicted RBP7.83□□□□□ -1.16
PTPRD-212ENST00000488774 NOL10Q9BSC4 688 aaKnown RBP7.83□□□□□ -1.16
PTPRD-212ENST00000488774 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.83□□□□□ -1.16
PTPRD-212ENST00000488774 EHD4Q9H223 541 aa7.83□□□□□ -1.16
PTPRD-212ENST00000488774 DHX36Q9H2U1 1008 aaKnown RBP7.83□□□□□ -1.16
PTPRD-212ENST00000488774 SERPINB13Q9UIV8 391 aa7.83□□□□□ -1.16
PTPRD-212ENST00000488774 MANSC4A6NHS7 340 aaPredicted RBP7.82□□□□□ -1.16
PTPRD-212ENST00000488774 UNCXA6NJT0 531 aa7.82□□□□□ -1.16
PTPRD-212ENST00000488774 MINDY4BA8MYZ0 360 aa7.82□□□□□ -1.16
PTPRD-212ENST00000488774 PATL2C9JE40 543 aaKnown RBP7.82□□□□□ -1.16
PTPRD-212ENST00000488774 FGAP02671 866 aa7.82□□□□□ -1.16
PTPRD-212ENST00000488774 POLR3DP05423 398 aaPredicted RBP7.82□□□□□ -1.16
PTPRD-212ENST00000488774 CHMLP26374 656 aa7.82□□□□□ -1.16
PTPRD-212ENST00000488774 DSG3P32926 999 aa7.82□□□□□ -1.16
PTPRD-212ENST00000488774 CTCFP49711 727 aaPredicted RBP7.82□□□□□ -1.16
PTPRD-212ENST00000488774 HAND2P61296 217 aa7.82□□□□□ -1.16
PTPRD-212ENST00000488774 MTMR2Q13614 643 aa7.82□□□□□ -1.16
PTPRD-212ENST00000488774 ZYXQ15942 572 aaKnown RBP7.82□□□□□ -1.16
PTPRD-212ENST00000488774 SBK1Q52WX2 424 aa7.82□□□□□ -1.16
PTPRD-212ENST00000488774 FAM47AQ5JRC9 791 aa7.82□□□□□ -1.16
PTPRD-212ENST00000488774 FOXP4Q8IVH2 680 aaPredicted RBP7.82□□□□□ -1.16
PTPRD-212ENST00000488774 CHMP4CQ96CF2 233 aa7.82□□□□□ -1.16
PTPRD-212ENST00000488774 ATP8A2Q9NTI2 1148 aa7.82□□□□□ -1.16
PTPRD-212ENST00000488774 HERC5Q9UII4 1024 aaKnown RBP7.82□□□□□ -1.16
PTPRD-212ENST00000488774 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.82□□□□□ -1.16
PTPRD-212ENST00000488774 KIAA0100Q14667 2235 aaKnown RBP7.82□□□□□ -1.16
PTPRD-212ENST00000488774 CCDC171Q6TFL3 1326 aa7.81□□□□□ -1.16
PTPRD-212ENST00000488774 IGKV6D-41A0A0C4DH26 115 aa7.81□□□□□ -1.16
PTPRD-212ENST00000488774 GPR25O00155 361 aa7.81□□□□□ -1.16
PTPRD-212ENST00000488774 PDHXO00330 501 aa7.81□□□□□ -1.16
PTPRD-212ENST00000488774 IGSF3O75054 1194 aa7.81□□□□□ -1.16
PTPRD-212ENST00000488774 ZFYP08048 801 aaPredicted RBP7.81□□□□□ -1.16
PTPRD-212ENST00000488774 SNAPC2Q13487 334 aa7.81□□□□□ -1.16
PTPRD-212ENST00000488774 CERKLQ49MI3 558 aaPredicted RBP7.81□□□□□ -1.16
PTPRD-212ENST00000488774 MCMDC2Q4G0Z9 681 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms