RNA–Protein interactions for RNA: ENST00000488571.1

SNU13-208, Transcript of small nuclear ribonucleoprotein 13, human

TSL 5

Gene SNU13, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNU13-208	ENST00000488571	CAP2	P40123	477 aa		14.02	□□□□□ -0.17
SNU13-208	ENST00000488571	HMGCS2	P54868	508 aa		14.02	□□□□□ -0.17
SNU13-208	ENST00000488571	ZNF280C	Q8ND82	737 aa		14.02	□□□□□ -0.17
SNU13-208	ENST00000488571	DIS3L	Q8TF46	1054 aa	Known RBP	14.02	□□□□□ -0.17
SNU13-208	ENST00000488571	ARHGAP45	Q92619	1136 aa		14.02	□□□□□ -0.17
SNU13-208	ENST00000488571	PAWR	Q96IZ0	340 aa	Known RBP	14.02	□□□□□ -0.17
SNU13-208	ENST00000488571	NEUROD6	Q96NK8	337 aa		14.02	□□□□□ -0.17
SNU13-208	ENST00000488571	GJD2	Q9UKL4	321 aa		14.02	□□□□□ -0.17
SNU13-208	ENST00000488571	PNMA3	Q9UL41	463 aa		14.02	□□□□□ -0.17
SNU13-208	ENST00000488571	TAOK2	Q9UL54	1235 aa		14.02	□□□□□ -0.17
SNU13-208	ENST00000488571	MAST2	Q6P0Q8	1798 aa		14.01	□□□□□ -0.17
SNU13-208	ENST00000488571	SOX1	O00570	391 aa	Predicted RBP	14.01	□□□□□ -0.17
SNU13-208	ENST00000488571	LDHC	P07864	332 aa		14.01	□□□□□ -0.17
SNU13-208	ENST00000488571	GNAI3	P08754	354 aa		14.01	□□□□□ -0.17
SNU13-208	ENST00000488571	MCAM	P43121	646 aa		14.01	□□□□□ -0.17
SNU13-208	ENST00000488571	GCLC	P48506	637 aa	Predicted RBP	14.01	□□□□□ -0.17
SNU13-208	ENST00000488571	PSEN1	P49768	467 aa		14.01	□□□□□ -0.17
SNU13-208	ENST00000488571	GSTO1	P78417	241 aa		14.01	□□□□□ -0.17
SNU13-208	ENST00000488571	SH3D19	Q5HYK7	790 aa		14.01	□□□□□ -0.17
SNU13-208	ENST00000488571	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	14.01	□□□□□ -0.17
SNU13-208	ENST00000488571	ASCC2	Q9H1I8	757 aa	Predicted RBP	14.01	□□□□□ -0.17
SNU13-208	ENST00000488571	FOCAD	Q5VW36	1801 aa		14.01	□□□□□ -0.17
SNU13-208	ENST00000488571	PNMA6E	A0A0J9YXQ4	647 aa		14	□□□□□ -0.17
SNU13-208	ENST00000488571		A0A1W2PPC1	479 aa		14	□□□□□ -0.17
SNU13-208	ENST00000488571	USP17L5	A8MUK1	530 aa		14	□□□□□ -0.17
SNU13-208	ENST00000488571	HMGCR	P04035	888 aa		14	□□□□□ -0.17
SNU13-208	ENST00000488571	TRIM32	Q13049	653 aa		14	□□□□□ -0.17
SNU13-208	ENST00000488571	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	14	□□□□□ -0.17
SNU13-208	ENST00000488571	TBC1D2	Q9BYX2	928 aa		14	□□□□□ -0.17
SNU13-208	ENST00000488571	RAI14	Q9P0K7	980 aa		14	□□□□□ -0.17
SNU13-208	ENST00000488571	TNN	Q9UQP3	1299 aa		14	□□□□□ -0.17
SNU13-208	ENST00000488571	MYO5A	Q9Y4I1	1855 aa	Known RBP	13.99	□□□□□ -0.17
SNU13-208	ENST00000488571	DDX60L	Q5H9U9	1706 aa	Known RBP	13.99	□□□□□ -0.17
SNU13-208	ENST00000488571	JAG1	P78504	1218 aa		13.99	□□□□□ -0.17
SNU13-208	ENST00000488571	GORAB	Q5T7V8	394 aa		13.99	□□□□□ -0.17
SNU13-208	ENST00000488571	TEX11	Q8IYF3	940 aa		13.99	□□□□□ -0.17
SNU13-208	ENST00000488571	DNAJC18	Q9H819	358 aa		13.99	□□□□□ -0.17
SNU13-208	ENST00000488571	MORF4L1	Q9UBU8	362 aa		13.99	□□□□□ -0.17
SNU13-208	ENST00000488571	STAP2	Q9UGK3	403 aa		13.99	□□□□□ -0.17
SNU13-208	ENST00000488571	HERC5	Q9UII4	1024 aa	Known RBP	13.99	□□□□□ -0.17
SNU13-208	ENST00000488571	POTEM	A6NI47	508 aa		13.98	□□□□□ -0.17
SNU13-208	ENST00000488571	PEX10	O60683	326 aa		13.98	□□□□□ -0.17
SNU13-208	ENST00000488571	TRIM27	P14373	513 aa		13.98	□□□□□ -0.17
SNU13-208	ENST00000488571	PABPC4	Q13310	644 aa	Known RBP eCLIP	13.98	□□□□□ -0.17	3e-7	■□□□□ 9.5
SNU13-208	ENST00000488571	SHROOM1	Q2M3G4	852 aa	Predicted RBP	13.98	□□□□□ -0.17
SNU13-208	ENST00000488571	NECAB2	Q7Z6G3	386 aa		13.98	□□□□□ -0.17
SNU13-208	ENST00000488571	ADGRA1	Q86SQ6	560 aa		13.98	□□□□□ -0.17
SNU13-208	ENST00000488571	ANKLE1	Q8NAG6	615 aa		13.98	□□□□□ -0.17
SNU13-208	ENST00000488571	LRCH3	Q96II8	777 aa		13.98	□□□□□ -0.17
SNU13-208	ENST00000488571	WDR18	Q9BV38	432 aa		13.98	□□□□□ -0.17
SNU13-208	ENST00000488571	RTN4	Q9NQC3	1192 aa	Known RBP	13.98	□□□□□ -0.17
SNU13-208	ENST00000488571	COL6A3	P12111	3177 aa		13.97	□□□□□ -0.17
SNU13-208	ENST00000488571	RPTOR	Q8N122	1335 aa		13.97	□□□□□ -0.17
SNU13-208	ENST00000488571	BACE1	P56817	501 aa		13.97	□□□□□ -0.17
SNU13-208	ENST00000488571	MTMR2	Q13614	643 aa		13.97	□□□□□ -0.17
SNU13-208	ENST00000488571	TRIB2	Q92519	343 aa		13.97	□□□□□ -0.17
SNU13-208	ENST00000488571	GDF15	Q99988	308 aa		13.97	□□□□□ -0.17
SNU13-208	ENST00000488571	AS3MT	Q9HBK9	375 aa		13.97	□□□□□ -0.17
SNU13-208	ENST00000488571	TXNRD2	Q9NNW7	524 aa		13.97	□□□□□ -0.17
SNU13-208	ENST00000488571	AATF	Q9NY61	560 aa	Known RBP eCLIP	13.97	□□□□□ -0.17
SNU13-208	ENST00000488571	LRP2BP	Q9P2M1	347 aa		13.97	□□□□□ -0.17
SNU13-208	ENST00000488571	PI4KB	Q9UBF8	816 aa		13.97	□□□□□ -0.17
SNU13-208	ENST00000488571	GNAI2	P04899	355 aa		13.96	□□□□□ -0.17
SNU13-208	ENST00000488571	UQCRFS1P1	P0C7P4	283 aa		13.96	□□□□□ -0.17
SNU13-208	ENST00000488571	HOXA7	P31268	230 aa	Predicted RBP	13.96	□□□□□ -0.17
SNU13-208	ENST00000488571	G3BP1	Q13283	466 aa	Known RBP eCLIP	13.96	□□□□□ -0.17
SNU13-208	ENST00000488571	MAP3K21	Q5TCX8	1036 aa		13.96	□□□□□ -0.17
SNU13-208	ENST00000488571	METTL16	Q86W50	562 aa	Known RBP	13.96	□□□□□ -0.17
SNU13-208	ENST00000488571	P2RX7	Q99572	595 aa	Known RBP	13.96	□□□□□ -0.17
SNU13-208	ENST00000488571	DHX36	Q9H2U1	1008 aa	Known RBP	13.96	□□□□□ -0.17
SNU13-208	ENST00000488571	HMX1	Q9NP08	348 aa	Predicted RBP	13.96	□□□□□ -0.17
SNU13-208	ENST00000488571	SNRK	Q9NRH2	765 aa		13.96	□□□□□ -0.17
SNU13-208	ENST00000488571	FLT1	P17948	1338 aa		13.95	□□□□□ -0.18
SNU13-208	ENST00000488571	ASNS	P08243	561 aa		13.95	□□□□□ -0.18
SNU13-208	ENST00000488571	BMP8B	P34820	402 aa		13.95	□□□□□ -0.18
SNU13-208	ENST00000488571	PPP4C	P60510	307 aa		13.95	□□□□□ -0.18
SNU13-208	ENST00000488571	IRX3	P78415	501 aa	Predicted RBP	13.95	□□□□□ -0.18
SNU13-208	ENST00000488571	PDAP1	Q13442	181 aa	Known RBP	13.95	□□□□□ -0.18
SNU13-208	ENST00000488571	NAA16	Q6N069	864 aa	Predicted RBP	13.95	□□□□□ -0.18
SNU13-208	ENST00000488571	POTEG	Q6S5H5	508 aa		13.95	□□□□□ -0.18
SNU13-208	ENST00000488571	POTEE	Q6S8J3	1075 aa		13.95	□□□□□ -0.18
SNU13-208	ENST00000488571	ATF7IP	Q6VMQ6	1270 aa		13.95	□□□□□ -0.18
SNU13-208	ENST00000488571	MAPKAPK5	Q8IW41	473 aa		13.95	□□□□□ -0.18
SNU13-208	ENST00000488571	C7orf61	Q8IZ16	206 aa		13.95	□□□□□ -0.18
SNU13-208	ENST00000488571	TGFBRAP1	Q8WUH2	860 aa		13.95	□□□□□ -0.18
SNU13-208	ENST00000488571	OGDHL	Q9ULD0	1010 aa		13.95	□□□□□ -0.18
SNU13-208	ENST00000488571	PALD1	Q9ULE6	856 aa		13.95	□□□□□ -0.18
SNU13-208	ENST00000488571	ZMYND8	Q9ULU4	1186 aa	Predicted RBP	13.95	□□□□□ -0.18
SNU13-208	ENST00000488571	BAG3	O95817	575 aa		13.94	□□□□□ -0.18
SNU13-208	ENST00000488571	CYP2E1	P05181	493 aa	Predicted RBP	13.94	□□□□□ -0.18
SNU13-208	ENST00000488571	CYP2B6	P20813	491 aa		13.94	□□□□□ -0.18
SNU13-208	ENST00000488571	HERVK_113	P62684	666 aa		13.94	□□□□□ -0.18
SNU13-208	ENST00000488571	TNNI3K	Q59H18	835 aa		13.94	□□□□□ -0.18
SNU13-208	ENST00000488571	USP6NL	Q92738	828 aa		13.94	□□□□□ -0.18
SNU13-208	ENST00000488571	DBNDD2	Q9BQY9	259 aa		13.94	□□□□□ -0.18
SNU13-208	ENST00000488571	NBPF3	Q9H094	633 aa		13.94	□□□□□ -0.18
SNU13-208	ENST00000488571	GPR108	Q9NPR9	543 aa		13.94	□□□□□ -0.18
SNU13-208	ENST00000488571	RBPJL	Q9UBG7	517 aa		13.94	□□□□□ -0.18
SNU13-208	ENST00000488571	FPGT-TNNI3K	V9GXZ4	949 aa		13.94	□□□□□ -0.18
SNU13-208	ENST00000488571	PFAS	O15067	1338 aa		13.93	□□□□□ -0.18

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