RNA–Protein interactions for RNA: ENST00000488131.1

CDC42BPA-213, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-213ENST00000488131 ANKRD26Q9UPS8 1709 aa5.55□□□□□ -1.52
CDC42BPA-213ENST00000488131 GPR25O00155 361 aa5.55□□□□□ -1.52
CDC42BPA-213ENST00000488131 U2SURPO15042 1029 aaKnown RBP5.55□□□□□ -1.52
CDC42BPA-213ENST00000488131 GPR182O15218 404 aa5.55□□□□□ -1.52
CDC42BPA-213ENST00000488131 OIP5O43482 229 aa5.55□□□□□ -1.52
CDC42BPA-213ENST00000488131 CAVIN2O95810 425 aa5.55□□□□□ -1.52
CDC42BPA-213ENST00000488131 TSPY4P0CV99 314 aa5.55□□□□□ -1.52
CDC42BPA-213ENST00000488131 TSPY10P0CW01 314 aa5.55□□□□□ -1.52
CDC42BPA-213ENST00000488131 ZSCAN22P10073 491 aaPredicted RBP5.55□□□□□ -1.52
CDC42BPA-213ENST00000488131 ZAP70P43403 619 aa5.55□□□□□ -1.52
CDC42BPA-213ENST00000488131 PTPN14Q15678 1187 aa5.55□□□□□ -1.52
CDC42BPA-213ENST00000488131 MCTP2Q6DN12 878 aa5.55□□□□□ -1.52
CDC42BPA-213ENST00000488131 ALKBH2Q6NS38 261 aa5.55□□□□□ -1.52
CDC42BPA-213ENST00000488131 TTC21BQ7Z4L5 1316 aa5.55□□□□□ -1.52
CDC42BPA-213ENST00000488131 FILIP1Q7Z7B0 1213 aa5.55□□□□□ -1.52
CDC42BPA-213ENST00000488131 TREML1Q86YW5 311 aa5.55□□□□□ -1.52
CDC42BPA-213ENST00000488131 ZSCAN29Q8IWY8 852 aaPredicted RBP5.55□□□□□ -1.52
CDC42BPA-213ENST00000488131 ABTB2Q8N961 1025 aa5.55□□□□□ -1.52
CDC42BPA-213ENST00000488131 ARHGEF40Q8TER5 1519 aa5.55□□□□□ -1.52
CDC42BPA-213ENST00000488131 HSH2DQ96JZ2 352 aa5.55□□□□□ -1.52
CDC42BPA-213ENST00000488131 CFAP53Q96M91 514 aa5.55□□□□□ -1.52
CDC42BPA-213ENST00000488131 YTHDC2Q9H6S0 1430 aaKnown RBP5.55□□□□□ -1.52
CDC42BPA-213ENST00000488131 ATP6V1DQ9Y5K8 247 aa5.55□□□□□ -1.52
CDC42BPA-213ENST00000488131 MRVI1Q9Y6F6 885 aa5.55□□□□□ -1.52
CDC42BPA-213ENST00000488131 NRXN1Q9ULB1 1477 aa5.54□□□□□ -1.52
CDC42BPA-213ENST00000488131 PLCH2O75038 1416 aa5.54□□□□□ -1.52
CDC42BPA-213ENST00000488131 ADGRL3Q9HAR2 1447 aa5.54□□□□□ -1.52
CDC42BPA-213ENST00000488131 OPLAHO14841 1288 aa5.54□□□□□ -1.52
CDC42BPA-213ENST00000488131 NDUFB5O43674 189 aa5.54□□□□□ -1.52
CDC42BPA-213ENST00000488131 PDGFAP04085 211 aa5.54□□□□□ -1.52
CDC42BPA-213ENST00000488131 HSP90B1P14625 803 aaKnown RBP5.54□□□□□ -1.52
CDC42BPA-213ENST00000488131 SDSP20132 328 aa5.54□□□□□ -1.52
CDC42BPA-213ENST00000488131 ACTN2P35609 894 aa5.54□□□□□ -1.52
CDC42BPA-213ENST00000488131 NEK4P51957 841 aa5.54□□□□□ -1.52
CDC42BPA-213ENST00000488131 ST5P78524 1137 aa5.54□□□□□ -1.52
CDC42BPA-213ENST00000488131 GIMAP6Q6P9H5 292 aa5.54□□□□□ -1.52
CDC42BPA-213ENST00000488131 REXO1L1PQ8IX06 675 aa5.54□□□□□ -1.52
CDC42BPA-213ENST00000488131 MSL3Q8N5Y2 521 aaKnown RBP5.54□□□□□ -1.52
CDC42BPA-213ENST00000488131 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.54□□□□□ -1.52
CDC42BPA-213ENST00000488131 PPM1EQ8WY54 764 aa5.54□□□□□ -1.52
CDC42BPA-213ENST00000488131 EDEM1Q92611 657 aa5.54□□□□□ -1.52
CDC42BPA-213ENST00000488131 MRRFQ96E11 262 aaKnown RBP5.54□□□□□ -1.52
CDC42BPA-213ENST00000488131 MRFAP1L1Q96HT8 127 aa5.54□□□□□ -1.52
CDC42BPA-213ENST00000488131 SUSD3Q96L08 255 aa5.54□□□□□ -1.52
CDC42BPA-213ENST00000488131 PLEKHF1Q96S99 279 aa5.54□□□□□ -1.52
CDC42BPA-213ENST00000488131 NUCKS1Q9H1E3 243 aaKnown RBP5.54□□□□□ -1.52
CDC42BPA-213ENST00000488131 TMX1Q9H3N1 280 aa5.54□□□□□ -1.52
CDC42BPA-213ENST00000488131 DEF6Q9H4E7 631 aa5.54□□□□□ -1.52
CDC42BPA-213ENST00000488131 CXorf56Q9H5V9 222 aa5.54□□□□□ -1.52
CDC42BPA-213ENST00000488131 RNF19AQ9NV58 838 aa5.54□□□□□ -1.52
CDC42BPA-213ENST00000488131 ZDHHC3Q9NYG2 299 aa5.54□□□□□ -1.52
CDC42BPA-213ENST00000488131 CNPY2Q9Y2B0 182 aa5.54□□□□□ -1.52
CDC42BPA-213ENST00000488131 VWDEQ8N2E2 1590 aa5.54□□□□□ -1.52
CDC42BPA-213ENST00000488131 CDK12Q9NYV4 1490 aaPredicted RBP5.54□□□□□ -1.52
CDC42BPA-213ENST00000488131 MSH6P52701 1360 aa5.54□□□□□ -1.52
CDC42BPA-213ENST00000488131 USP27XA6NNY8 438 aa5.54□□□□□ -1.52
CDC42BPA-213ENST00000488131 MICAL2O94851 1124 aa5.54□□□□□ -1.52
CDC42BPA-213ENST00000488131 F11P03951 625 aa5.54□□□□□ -1.52
CDC42BPA-213ENST00000488131 CCZ1BP86790 482 aa5.54□□□□□ -1.52
CDC42BPA-213ENST00000488131 CCZ1P86791 482 aaPredicted RBP5.54□□□□□ -1.52
CDC42BPA-213ENST00000488131 DNM1Q05193 864 aaKnown RBP5.54□□□□□ -1.52
CDC42BPA-213ENST00000488131 TYRO3Q06418 890 aa5.54□□□□□ -1.52
CDC42BPA-213ENST00000488131 FMR1Q06787 632 aaKnown RBP eCLIP5.54□□□□□ -1.521e-7■□□□□ 9
CDC42BPA-213ENST00000488131 TRDNQ13061 729 aa5.54□□□□□ -1.52
CDC42BPA-213ENST00000488131 MAP3K11Q16584 847 aa5.54□□□□□ -1.52
CDC42BPA-213ENST00000488131 HSP90AB3PQ58FF7 597 aa5.54□□□□□ -1.52
CDC42BPA-213ENST00000488131 TMCO3Q6UWJ1 677 aa5.54□□□□□ -1.52
CDC42BPA-213ENST00000488131 MMS22LQ6ZRQ5 1243 aa5.54□□□□□ -1.52
CDC42BPA-213ENST00000488131 LRRC8AQ8IWT6 810 aa5.54□□□□□ -1.52
CDC42BPA-213ENST00000488131 GJD3Q8N144 294 aa5.54□□□□□ -1.52
CDC42BPA-213ENST00000488131 CCAR2Q8N163 923 aaKnown RBP5.54□□□□□ -1.52
CDC42BPA-213ENST00000488131 RHPN1Q8TCX5 695 aa5.54□□□□□ -1.52
CDC42BPA-213ENST00000488131 CITED4Q96RK1 184 aa5.54□□□□□ -1.52
CDC42BPA-213ENST00000488131 ZIC5Q96T25 663 aa5.54□□□□□ -1.52
CDC42BPA-213ENST00000488131 SETDB2Q96T68 719 aa5.54□□□□□ -1.52
CDC42BPA-213ENST00000488131 TACO1Q9BSH4 297 aaKnown RBP5.54□□□□□ -1.52
CDC42BPA-213ENST00000488131 SRRTQ9BXP5 876 aaKnown RBP5.54□□□□□ -1.52
CDC42BPA-213ENST00000488131 OXCT2Q9BYC2 517 aaPredicted RBP5.54□□□□□ -1.52
CDC42BPA-213ENST00000488131 GGNBP2Q9H3C7 697 aa5.54□□□□□ -1.52
CDC42BPA-213ENST00000488131 ZSCAN16Q9H4T2 348 aaPredicted RBP5.54□□□□□ -1.52
CDC42BPA-213ENST00000488131 TIMMDC1Q9NPL8 285 aa5.54□□□□□ -1.52
CDC42BPA-213ENST00000488131 RAI14Q9P0K7 980 aa5.54□□□□□ -1.52
CDC42BPA-213ENST00000488131 ORC3Q9UBD5 711 aaPredicted RBP5.54□□□□□ -1.52
CDC42BPA-213ENST00000488131 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.54□□□□□ -1.52
CDC42BPA-213ENST00000488131 GDF2Q9UK05 429 aaPredicted RBP5.54□□□□□ -1.52
CDC42BPA-213ENST00000488131 EXOC6BQ9Y2D4 811 aa5.54□□□□□ -1.52
CDC42BPA-213ENST00000488131 USP20Q9Y2K6 914 aa5.54□□□□□ -1.52
CDC42BPA-213ENST00000488131 CHD2O14647 1828 aaKnown RBP5.53□□□□□ -1.52
CDC42BPA-213ENST00000488131 QRICH2Q9H0J4 1663 aa5.53□□□□□ -1.52
CDC42BPA-213ENST00000488131 DEPDC5O75140 1603 aa5.53□□□□□ -1.52
CDC42BPA-213ENST00000488131 A6NHS1 94 aa5.53□□□□□ -1.52
CDC42BPA-213ENST00000488131 TBC1D8O95759 1140 aa5.53□□□□□ -1.52
CDC42BPA-213ENST00000488131 F13A1P00488 732 aa5.53□□□□□ -1.52
CDC42BPA-213ENST00000488131 TPM1P09493 284 aa5.53□□□□□ -1.52
CDC42BPA-213ENST00000488131 MCCP23508 829 aa5.53□□□□□ -1.52
CDC42BPA-213ENST00000488131 MSX1P28360 303 aa5.53□□□□□ -1.52
CDC42BPA-213ENST00000488131 MZF1P28698 734 aaPredicted RBP5.53□□□□□ -1.52
CDC42BPA-213ENST00000488131 GRNP28799 593 aaKnown RBP5.53□□□□□ -1.52
CDC42BPA-213ENST00000488131 OAS2P29728 719 aaKnown RBP5.53□□□□□ -1.52
CDC42BPA-213ENST00000488131 TMPOP42166 694 aaKnown RBP5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms