RNA–Protein interactions for RNA: ENST00000487647.5

FGFR1-222, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 1 (best)

Gene FGFR1, Length 1,608 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-222ENST00000487647 NTRK3Q16288 839 aa17.16■□□□□ 0.34
FGFR1-222ENST00000487647 FAM47AQ5JRC9 791 aa17.16■□□□□ 0.34
FGFR1-222ENST00000487647 CDC37L1Q7L3B6 337 aa17.16■□□□□ 0.34
FGFR1-222ENST00000487647 GMLQ99445 158 aa17.16■□□□□ 0.34
FGFR1-222ENST00000487647 EHD4Q9H223 541 aa17.16■□□□□ 0.34
FGFR1-222ENST00000487647 LMBRD1Q9NUN5 540 aa17.16■□□□□ 0.34
FGFR1-222ENST00000487647 NAV1Q8NEY1 1877 aa17.16■□□□□ 0.34
FGFR1-222ENST00000487647 RASA1P20936 1047 aa17.15■□□□□ 0.34
FGFR1-222ENST00000487647 GABPAQ06546 454 aa17.15■□□□□ 0.34
FGFR1-222ENST00000487647 PICALMQ13492 652 aa17.15■□□□□ 0.34
FGFR1-222ENST00000487647 TRIM22Q8IYM9 498 aa17.15■□□□□ 0.34
FGFR1-222ENST00000487647 OGFOD1Q8N543 542 aa17.15■□□□□ 0.34
FGFR1-222ENST00000487647 TMEM87AQ8NBN3 555 aa17.15■□□□□ 0.34
FGFR1-222ENST00000487647 NEDD1Q8NHV4 660 aa17.15■□□□□ 0.34
FGFR1-222ENST00000487647 MAP3K14Q99558 947 aa17.15■□□□□ 0.34
FGFR1-222ENST00000487647 SPON1Q9HCB6 807 aa17.15■□□□□ 0.34
FGFR1-222ENST00000487647 SCN9AQ15858 1988 aa17.15■□□□□ 0.34
FGFR1-222ENST00000487647 PSMD14O00487 310 aa17.14■□□□□ 0.33
FGFR1-222ENST00000487647 SSRP1Q08945 709 aaKnown RBP17.14■□□□□ 0.33
FGFR1-222ENST00000487647 TROAPQ12815 778 aa17.14■□□□□ 0.33
FGFR1-222ENST00000487647 CFAP100Q494V2 611 aa17.14■□□□□ 0.33
FGFR1-222ENST00000487647 C8orf76Q96K31 380 aa17.14■□□□□ 0.33
FGFR1-222ENST00000487647 DDX4Q9NQI0 724 aaKnown RBP17.14■□□□□ 0.33
FGFR1-222ENST00000487647 SERPINB13Q9UIV8 391 aa17.14■□□□□ 0.33
FGFR1-222ENST00000487647 DDX60LQ5H9U9 1706 aaKnown RBP17.14■□□□□ 0.33
FGFR1-222ENST00000487647 ENTPD3O75355 529 aa17.14■□□□□ 0.33
FGFR1-222ENST00000487647 RAD17O75943 681 aa17.14■□□□□ 0.33
FGFR1-222ENST00000487647 FMNL1O95466 1100 aaPredicted RBP17.14■□□□□ 0.33
FGFR1-222ENST00000487647 RXRAP19793 462 aa17.14■□□□□ 0.33
FGFR1-222ENST00000487647 TNIP1Q15025 636 aa17.14■□□□□ 0.33
FGFR1-222ENST00000487647 RAB11FIP4Q86YS3 637 aa17.14■□□□□ 0.33
FGFR1-222ENST00000487647 KLHL34Q8N239 644 aa17.14■□□□□ 0.33
FGFR1-222ENST00000487647 FBXO18Q8NFZ0 1043 aa17.14■□□□□ 0.33
FGFR1-222ENST00000487647 NUP133Q8WUM0 1156 aa17.14■□□□□ 0.33
FGFR1-222ENST00000487647 MYL10Q9BUA6 226 aa17.14■□□□□ 0.33
FGFR1-222ENST00000487647 BCS1LQ9Y276 419 aa17.14■□□□□ 0.33
FGFR1-222ENST00000487647 PRPF40AO75400 957 aaKnown RBP17.13■□□□□ 0.33
FGFR1-222ENST00000487647 KRT85P78386 507 aa17.13■□□□□ 0.33
FGFR1-222ENST00000487647 KLHL40Q2TBA0 621 aa17.13■□□□□ 0.33
FGFR1-222ENST00000487647 SLC4A8Q2Y0W8 1093 aa17.13■□□□□ 0.33
FGFR1-222ENST00000487647 PPP4R3BQ5MIZ7 849 aa17.13■□□□□ 0.33
FGFR1-222ENST00000487647 ATL3Q6DD88 541 aa17.13■□□□□ 0.33
FGFR1-222ENST00000487647 RCSD1Q6JBY9 416 aa17.13■□□□□ 0.33
FGFR1-222ENST00000487647 MTMR14Q8NCE2 650 aa17.13■□□□□ 0.33
FGFR1-222ENST00000487647 KAT14Q9H8E8 782 aa17.13■□□□□ 0.33
FGFR1-222ENST00000487647 IL17RBQ9NRM6 502 aa17.13■□□□□ 0.33
FGFR1-222ENST00000487647 ZNF646O15015 1829 aaPredicted RBP17.12■□□□□ 0.33
FGFR1-222ENST00000487647 NFKBIEO00221 500 aa17.12■□□□□ 0.33
FGFR1-222ENST00000487647 DTNBO60941 627 aa17.12■□□□□ 0.33
FGFR1-222ENST00000487647 KIF5BP33176 963 aa17.12■□□□□ 0.33
FGFR1-222ENST00000487647 RESTQ13127 1097 aa17.12■□□□□ 0.33
FGFR1-222ENST00000487647 CIAPIN1Q6FI81 312 aa17.12■□□□□ 0.33
FGFR1-222ENST00000487647 FOXP4Q8IVH2 680 aaPredicted RBP17.12■□□□□ 0.33
FGFR1-222ENST00000487647 CCDC144CPQ8IYA2 1237 aa17.12■□□□□ 0.33
FGFR1-222ENST00000487647 CRACR2BQ8N4Y2 399 aaPredicted RBP17.12■□□□□ 0.33
FGFR1-222ENST00000487647 CTCFLQ8NI51 663 aaPredicted RBP17.12■□□□□ 0.33
FGFR1-222ENST00000487647 TMOD2Q9NZR1 351 aa17.12■□□□□ 0.33
FGFR1-222ENST00000487647 PLIN4Q96Q06 1357 aa17.12■□□□□ 0.33
FGFR1-222ENST00000487647 FOCADQ5VW36 1801 aa17.12■□□□□ 0.33
FGFR1-222ENST00000487647 NMT2O60551 498 aa17.11■□□□□ 0.33
FGFR1-222ENST00000487647 DEXIO95424 95 aa17.11■□□□□ 0.33
FGFR1-222ENST00000487647 MBD3O95983 291 aa17.11■□□□□ 0.33
FGFR1-222ENST00000487647 NCLP19338 710 aaKnown RBP17.11■□□□□ 0.33
FGFR1-222ENST00000487647 NOVP48745 357 aa17.11■□□□□ 0.33
FGFR1-222ENST00000487647 CXCL9Q07325 125 aa17.11■□□□□ 0.33
FGFR1-222ENST00000487647 NFIAQ12857 509 aa17.11■□□□□ 0.33
FGFR1-222ENST00000487647 DLGAP5Q15398 846 aa17.11■□□□□ 0.33
FGFR1-222ENST00000487647 SLC44A5Q8NCS7 719 aa17.11■□□□□ 0.33
FGFR1-222ENST00000487647 ALG1Q9BT22 464 aa17.11■□□□□ 0.33
FGFR1-222ENST00000487647 RNF26Q9BY78 433 aaPredicted RBP17.11■□□□□ 0.33
FGFR1-222ENST00000487647 SCAND2PQ9GZW5 306 aaPredicted RBP17.11■□□□□ 0.33
FGFR1-222ENST00000487647 PI4KBQ9UBF8 816 aa17.11■□□□□ 0.33
FGFR1-222ENST00000487647 DDX49Q9Y6V7 483 aaKnown RBP17.11■□□□□ 0.33
FGFR1-222ENST00000487647 COL2A1P02458 1487 aaPredicted RBP17.11■□□□□ 0.33
FGFR1-222ENST00000487647 BRCA1P38398 1863 aaKnown RBP17.11■□□□□ 0.33
FGFR1-222ENST00000487647 PSME4Q14997 1843 aa17.11■□□□□ 0.33
FGFR1-222ENST00000487647 CDK5RAP2Q96SN8 1893 aa17.11■□□□□ 0.33
FGFR1-222ENST00000487647 SPDYE2BA6NHP3 402 aa17.1■□□□□ 0.33
FGFR1-222ENST00000487647 SPDYE6P0CI01 402 aa17.1■□□□□ 0.33
FGFR1-222ENST00000487647 RPS12P25398 132 aaKnown RBP17.1■□□□□ 0.33
FGFR1-222ENST00000487647 GNAQP50148 359 aa17.1■□□□□ 0.33
FGFR1-222ENST00000487647 DNM1Q05193 864 aaKnown RBP17.1■□□□□ 0.33
FGFR1-222ENST00000487647 FERMT3Q86UX7 667 aa17.1■□□□□ 0.33
FGFR1-222ENST00000487647 CCDC17Q96LX7 622 aa17.1■□□□□ 0.33
FGFR1-222ENST00000487647 CFAP45Q9UL16 551 aa17.1■□□□□ 0.33
FGFR1-222ENST00000487647 COL4A5P29400 1685 aa17.1■□□□□ 0.33
FGFR1-222ENST00000487647 AKAP17AQ02040 695 aaKnown RBP17.1■□□□□ 0.33
FGFR1-222ENST00000487647 TRIM29Q14134 588 aa17.1■□□□□ 0.33
FGFR1-222ENST00000487647 FKBP1CQ5VVH2 108 aa17.1■□□□□ 0.33
FGFR1-222ENST00000487647 NBPF11Q86T75 865 aa17.1■□□□□ 0.33
FGFR1-222ENST00000487647 PHKBQ93100 1093 aa17.1■□□□□ 0.33
FGFR1-222ENST00000487647 PRMT6Q96LA8 375 aaPredicted RBP17.1■□□□□ 0.33
FGFR1-222ENST00000487647 SLC26A6Q9BXS9 759 aa17.1■□□□□ 0.33
FGFR1-222ENST00000487647 RBM27Q9P2N5 1060 aaKnown RBP17.1■□□□□ 0.33
FGFR1-222ENST00000487647 FAM198AQ9UFP1 575 aa17.1■□□□□ 0.33
FGFR1-222ENST00000487647 ATRNL1Q5VV63 1379 aa17.09■□□□□ 0.33
FGFR1-222ENST00000487647 FER1L6Q2WGJ9 1857 aa17.09■□□□□ 0.33
FGFR1-222ENST00000487647 PRPF3O43395 683 aaKnown RBP17.09■□□□□ 0.33
FGFR1-222ENST00000487647 BRAPQ7Z569 592 aa17.09■□□□□ 0.33
FGFR1-222ENST00000487647 USP48Q86UV5 1035 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms