RNA–Protein interactions for RNA: ENST00000487332.1

RNF220-215, Transcript of ring finger protein 220, humanhuman

TSL 3

Gene RNF220, Length 452 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-215ENST00000487332 PABPC4Q13310 644 aaKnown RBP eCLIP12.36□□□□□ -0.43
RNF220-215ENST00000487332 ANKRD45Q5TZF3 282 aa12.36□□□□□ -0.43
RNF220-215ENST00000487332 OTOP1Q7RTM1 612 aa12.36□□□□□ -0.43
RNF220-215ENST00000487332 AMOTL1Q8IY63 956 aa12.36□□□□□ -0.43
RNF220-215ENST00000487332 EXOC6Q8TAG9 804 aa12.36□□□□□ -0.43
RNF220-215ENST00000487332 SDR42E1Q8WUS8 393 aa12.36□□□□□ -0.43
RNF220-215ENST00000487332 DDRGK1Q96HY6 314 aa12.36□□□□□ -0.43
RNF220-215ENST00000487332 C12orf42Q96LP6 360 aa12.36□□□□□ -0.43
RNF220-215ENST00000487332 PUS7LQ9H0K6 701 aaKnown RBP12.36□□□□□ -0.43
RNF220-215ENST00000487332 MCM9Q9NXL9 1143 aa12.36□□□□□ -0.43
RNF220-215ENST00000487332 ARPP21Q9UBL0 812 aaPredicted RBP12.36□□□□□ -0.43
RNF220-215ENST00000487332 PNMA3Q9UL41 463 aa12.36□□□□□ -0.43
RNF220-215ENST00000487332 SUPT16HQ9Y5B9 1047 aaKnown RBP12.36□□□□□ -0.43
RNF220-215ENST00000487332 RNF113AO15541 343 aaKnown RBP12.35□□□□□ -0.43
RNF220-215ENST00000487332 POLR3DP05423 398 aaPredicted RBP12.35□□□□□ -0.43
RNF220-215ENST00000487332 BCRP11274 1271 aa12.35□□□□□ -0.43
RNF220-215ENST00000487332 PDE1AP54750 535 aa12.35□□□□□ -0.43
RNF220-215ENST00000487332 PRMT2P55345 433 aa12.35□□□□□ -0.43
RNF220-215ENST00000487332 BACE1P56817 501 aa12.35□□□□□ -0.43
RNF220-215ENST00000487332 LACTBP83111 547 aaPredicted RBP12.35□□□□□ -0.43
RNF220-215ENST00000487332 TSHZ3Q63HK5 1081 aa12.35□□□□□ -0.43
RNF220-215ENST00000487332 CD99L2Q8TCZ2 262 aa12.35□□□□□ -0.43
RNF220-215ENST00000487332 OTUD7AQ8TE49 926 aaPredicted RBP12.35□□□□□ -0.43
RNF220-215ENST00000487332 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.35□□□□□ -0.43
RNF220-215ENST00000487332 HPS5Q9UPZ3 1129 aa12.35□□□□□ -0.43
RNF220-215ENST00000487332 USP17L10C9JJH3 530 aa12.34□□□□□ -0.43
RNF220-215ENST00000487332 GDF11O95390 407 aa12.34□□□□□ -0.43
RNF220-215ENST00000487332 HOXA7P31268 230 aaPredicted RBP12.34□□□□□ -0.43
RNF220-215ENST00000487332 NUCB1Q02818 461 aa12.34□□□□□ -0.43
RNF220-215ENST00000487332 SPP2Q13103 211 aa12.34□□□□□ -0.43
RNF220-215ENST00000487332 KIF22Q14807 665 aa12.34□□□□□ -0.43
RNF220-215ENST00000487332 CERKLQ49MI3 558 aaPredicted RBP12.34□□□□□ -0.43
RNF220-215ENST00000487332 SBK1Q52WX2 424 aa12.34□□□□□ -0.43
RNF220-215ENST00000487332 C12orf60Q5U649 245 aa12.34□□□□□ -0.43
RNF220-215ENST00000487332 GADL1Q6ZQY3 521 aa12.34□□□□□ -0.43
RNF220-215ENST00000487332 CCDC84Q86UT8 332 aaPredicted RBP12.34□□□□□ -0.43
RNF220-215ENST00000487332 OSBP2Q969R2 916 aa12.34□□□□□ -0.43
RNF220-215ENST00000487332 STRBPQ96SI9 672 aaKnown RBP12.34□□□□□ -0.43
RNF220-215ENST00000487332 BCL11AQ9H165 835 aa12.34□□□□□ -0.43
RNF220-215ENST00000487332 OSBPL3Q9H4L5 887 aa12.34□□□□□ -0.43
RNF220-215ENST00000487332 EFCC1Q9HA90 598 aa12.34□□□□□ -0.43
RNF220-215ENST00000487332 TRIM17Q9Y577 477 aa12.34□□□□□ -0.43
RNF220-215ENST00000487332 GPAA1O43292 621 aa12.33□□□□□ -0.44
RNF220-215ENST00000487332 GH2P01242 217 aa12.33□□□□□ -0.44
RNF220-215ENST00000487332 CHGBP05060 677 aa12.33□□□□□ -0.44
RNF220-215ENST00000487332 USP14P54578 494 aa12.33□□□□□ -0.44
RNF220-215ENST00000487332 HMGCS2P54868 508 aa12.33□□□□□ -0.44
RNF220-215ENST00000487332 JAG1P78504 1218 aa12.33□□□□□ -0.44
RNF220-215ENST00000487332 MTMR2Q13614 643 aa12.33□□□□□ -0.44
RNF220-215ENST00000487332 FAM110CQ1W6H9 321 aa12.33□□□□□ -0.44
RNF220-215ENST00000487332 ABCB5Q2M3G0 1257 aa12.33□□□□□ -0.44
RNF220-215ENST00000487332 SLFNL1Q499Z3 407 aa12.33□□□□□ -0.44
RNF220-215ENST00000487332 C16orf86Q6ZW13 317 aa12.33□□□□□ -0.44
RNF220-215ENST00000487332 GTF3C2Q8WUA4 911 aaPredicted RBP12.33□□□□□ -0.44
RNF220-215ENST00000487332 EVI5LQ96CN4 794 aa12.33□□□□□ -0.44
RNF220-215ENST00000487332 CCDC17Q96LX7 622 aa12.33□□□□□ -0.44
RNF220-215ENST00000487332 KIAA1683Q9H0B3 1180 aa12.33□□□□□ -0.44
RNF220-215ENST00000487332 CABP5Q9NP86 173 aa12.33□□□□□ -0.44
RNF220-215ENST00000487332 PTPN22Q9Y2R2 807 aa12.33□□□□□ -0.44
RNF220-215ENST00000487332 SLC4A4Q9Y6R1 1079 aa12.33□□□□□ -0.44
RNF220-215ENST00000487332 PRKAB2O43741 272 aa12.32□□□□□ -0.44
RNF220-215ENST00000487332 IGHDP01880 384 aa12.32□□□□□ -0.44
RNF220-215ENST00000487332 OSBPP22059 807 aa12.32□□□□□ -0.44
RNF220-215ENST00000487332 GCLCP48506 637 aaPredicted RBP12.32□□□□□ -0.44
RNF220-215ENST00000487332 RGS19P49795 217 aa12.32□□□□□ -0.44
RNF220-215ENST00000487332 SLC4A8Q2Y0W8 1093 aa12.32□□□□□ -0.44
RNF220-215ENST00000487332 ZMYM1Q5SVZ6 1142 aa12.32□□□□□ -0.44
RNF220-215ENST00000487332 TREML2Q5T2D2 321 aa12.32□□□□□ -0.44
RNF220-215ENST00000487332 USP17L2Q6R6M4 530 aa12.32□□□□□ -0.44
RNF220-215ENST00000487332 TMEM179Q6ZVK1 233 aa12.32□□□□□ -0.44
RNF220-215ENST00000487332 CHD1LQ86WJ1 897 aa12.32□□□□□ -0.44
RNF220-215ENST00000487332 FSD1Q9BTV5 496 aa12.32□□□□□ -0.44
RNF220-215ENST00000487332 TMOD4Q9NZQ9 345 aa12.32□□□□□ -0.44
RNF220-215ENST00000487332 GREB1LQ9C091 1923 aaPredicted RBP12.31□□□□□ -0.44
RNF220-215ENST00000487332 RBBP6Q7Z6E9 1792 aaKnown RBP12.31□□□□□ -0.44
RNF220-215ENST00000487332 GSG1L2A8MUP6 293 aa12.31□□□□□ -0.44
RNF220-215ENST00000487332 USP17L12C9JPN9 530 aa12.31□□□□□ -0.44
RNF220-215ENST00000487332 USP17L21D6R901 530 aa12.31□□□□□ -0.44
RNF220-215ENST00000487332 CYP2C8P10632 490 aa12.31□□□□□ -0.44
RNF220-215ENST00000487332 GUCY1A2P33402 732 aa12.31□□□□□ -0.44
RNF220-215ENST00000487332 CAP1Q01518 475 aa12.31□□□□□ -0.44
RNF220-215ENST00000487332 SHROOM1Q2M3G4 852 aaPredicted RBP12.31□□□□□ -0.44
RNF220-215ENST00000487332 CTR9Q6PD62 1173 aa12.31□□□□□ -0.44
RNF220-215ENST00000487332 SMCR8Q8TEV9 937 aaPredicted RBP12.31□□□□□ -0.44
RNF220-215ENST00000487332 ARMC5Q96C12 935 aa12.31□□□□□ -0.44
RNF220-215ENST00000487332 LNPKQ9C0E8 428 aa12.31□□□□□ -0.44
RNF220-215ENST00000487332 EPB41L4AQ9HCS5 686 aaPredicted RBP12.31□□□□□ -0.44
RNF220-215ENST00000487332 MORF4L1Q9UBU8 362 aa12.31□□□□□ -0.44
RNF220-215ENST00000487332 CPA4Q9UI42 421 aa12.31□□□□□ -0.44
RNF220-215ENST00000487332 CCDC85CA6NKD9 419 aa12.3□□□□□ -0.44
RNF220-215ENST00000487332 M0R2C6 588 aa12.3□□□□□ -0.44
RNF220-215ENST00000487332 CAPN15O75808 1086 aa12.3□□□□□ -0.44
RNF220-215ENST00000487332 CYP2D6P10635 497 aa12.3□□□□□ -0.44
RNF220-215ENST00000487332 HOXD10P28358 340 aa12.3□□□□□ -0.44
RNF220-215ENST00000487332 FCGRTP55899 365 aa12.3□□□□□ -0.44
RNF220-215ENST00000487332 ASCC2Q9H1I8 757 aaPredicted RBP12.3□□□□□ -0.44
RNF220-215ENST00000487332 SH2D4AQ9H788 454 aa12.3□□□□□ -0.44
RNF220-215ENST00000487332 ZMYM6O95789 1325 aa12.3□□□□□ -0.44
RNF220-215ENST00000487332 PLIN4Q96Q06 1357 aa12.3□□□□□ -0.44
RNF220-215ENST00000487332 A0A0G2JMZ2 1700 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms