RNA–Protein interactions for RNA: ENST00000485983.6

SRGAP3-207, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best)

Gene SRGAP3, Length 5,677 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-207ENST00000485983 PPP2R5CQ13362 524 aa11.76□□□□□ -0.53
SRGAP3-207ENST00000485983 MUM1L1Q5H9M0 696 aa11.76□□□□□ -0.53
SRGAP3-207ENST00000485983 ARHGEF16Q5VV41 709 aa11.76□□□□□ -0.53
SRGAP3-207ENST00000485983 CCDC24Q8N4L8 307 aa11.76□□□□□ -0.53
SRGAP3-207ENST00000485983 CSGALNACT2Q8N6G5 542 aa11.76□□□□□ -0.53
SRGAP3-207ENST00000485983 MED10Q9BTT4 135 aa11.76□□□□□ -0.53
SRGAP3-207ENST00000485983 IFNKQ9P0W0 207 aa11.76□□□□□ -0.53
SRGAP3-207ENST00000485983 IBTKQ9P2D0 1353 aaPredicted RBP11.76□□□□□ -0.53
SRGAP3-207ENST00000485983 AKR1B15C9JRZ8 316 aaPredicted RBP11.75□□□□□ -0.53
SRGAP3-207ENST00000485983 GPAA1O43292 621 aa11.75□□□□□ -0.53
SRGAP3-207ENST00000485983 TTC38Q5R3I4 469 aa11.75□□□□□ -0.53
SRGAP3-207ENST00000485983 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.75□□□□□ -0.53
SRGAP3-207ENST00000485983 ATF7P17544 494 aaPredicted RBP11.75□□□□□ -0.53
SRGAP3-207ENST00000485983 TNNI1P19237 187 aa11.75□□□□□ -0.53
SRGAP3-207ENST00000485983 SATB1Q01826 763 aa11.75□□□□□ -0.53
SRGAP3-207ENST00000485983 PLCB4Q15147 1175 aa11.75□□□□□ -0.53
SRGAP3-207ENST00000485983 CALCRLQ16602 461 aa11.75□□□□□ -0.53
SRGAP3-207ENST00000485983 CNKSR1Q969H4 720 aa11.75□□□□□ -0.53
SRGAP3-207ENST00000485983 ASXL2Q76L83 1435 aa11.75□□□□□ -0.53
SRGAP3-207ENST00000485983 RPS8P62241 208 aaKnown RBP11.75□□□□□ -0.53
SRGAP3-207ENST00000485983 USTQ9Y2C2 406 aa11.75□□□□□ -0.53
SRGAP3-207ENST00000485983 MAP3K19Q56UN5 1328 aa11.75□□□□□ -0.53
SRGAP3-207ENST00000485983 ARHGEF10O15013 1369 aa11.75□□□□□ -0.53
SRGAP3-207ENST00000485983 CIB2O75838 187 aa11.75□□□□□ -0.53
SRGAP3-207ENST00000485983 GCNT3O95395 438 aa11.75□□□□□ -0.53
SRGAP3-207ENST00000485983 A1BGP04217 495 aa11.75□□□□□ -0.53
SRGAP3-207ENST00000485983 MNAT1P51948 309 aa11.75□□□□□ -0.53
SRGAP3-207ENST00000485983 MAP7Q14244 749 aa11.75□□□□□ -0.53
SRGAP3-207ENST00000485983 MCTP2Q6DN12 878 aa11.75□□□□□ -0.53
SRGAP3-207ENST00000485983 C2CD5Q86YS7 1000 aa11.75□□□□□ -0.53
SRGAP3-207ENST00000485983 MRPL44Q9H9J2 332 aaKnown RBP11.75□□□□□ -0.53
SRGAP3-207ENST00000485983 CTTNBP2NLQ9P2B4 639 aa11.75□□□□□ -0.53
SRGAP3-207ENST00000485983 GTF3C6Q969F1 213 aa11.75□□□□□ -0.53
SRGAP3-207ENST00000485983 EPSTI1Q96J88 318 aa11.75□□□□□ -0.53
SRGAP3-207ENST00000485983 SPDYE16A6NNV3 312 aaPredicted RBP11.74□□□□□ -0.53
SRGAP3-207ENST00000485983 GAS7O60861 476 aa11.74□□□□□ -0.53
SRGAP3-207ENST00000485983 VAMP4O75379 141 aa11.74□□□□□ -0.53
SRGAP3-207ENST00000485983 HOXB7P09629 217 aa11.74□□□□□ -0.53
SRGAP3-207ENST00000485983 SPDYE2Q495Y8 402 aa11.74□□□□□ -0.53
SRGAP3-207ENST00000485983 CASC4Q6P4E1 433 aa11.74□□□□□ -0.53
SRGAP3-207ENST00000485983 MIER3Q7Z3K6 550 aa11.74□□□□□ -0.53
SRGAP3-207ENST00000485983 TESPA1A2RU30 521 aaPredicted RBP11.74□□□□□ -0.53
SRGAP3-207ENST00000485983 MFSD14BQ5SR56 506 aa11.74□□□□□ -0.53
SRGAP3-207ENST00000485983 INTS8Q75QN2 995 aaKnown RBP11.74□□□□□ -0.53
SRGAP3-207ENST00000485983 DNAJC10Q8IXB1 793 aa11.74□□□□□ -0.53
SRGAP3-207ENST00000485983 SPATA5Q8NB90 893 aa11.74□□□□□ -0.53
SRGAP3-207ENST00000485983 TRERF1Q96PN7 1200 aa11.74□□□□□ -0.53
SRGAP3-207ENST00000485983 RAB3IPQ96QF0 476 aaPredicted RBP11.74□□□□□ -0.53
SRGAP3-207ENST00000485983 GOLGA6CA6NDK9 693 aa11.74□□□□□ -0.53
SRGAP3-207ENST00000485983 GOLGA6BA6NDN3 693 aa11.74□□□□□ -0.53
SRGAP3-207ENST00000485983 GOLGA6DP0CG33 693 aa11.74□□□□□ -0.53
SRGAP3-207ENST00000485983 TMOD1P28289 359 aa11.74□□□□□ -0.53
SRGAP3-207ENST00000485983 UTP14CQ5TAP6 766 aaKnown RBP11.74□□□□□ -0.53
SRGAP3-207ENST00000485983 FYB2Q5VWT5 728 aa11.74□□□□□ -0.53
SRGAP3-207ENST00000485983 ANKRD35Q8N283 1001 aa11.74□□□□□ -0.53
SRGAP3-207ENST00000485983 SLC52A2Q9HAB3 445 aa11.74□□□□□ -0.53
SRGAP3-207ENST00000485983 GOLGA6AQ9NYA3 693 aa11.74□□□□□ -0.53
SRGAP3-207ENST00000485983 SLAIN2Q9P270 581 aa11.74□□□□□ -0.53
SRGAP3-207ENST00000485983 NUP58Q9BVL2 599 aa11.74□□□□□ -0.53
SRGAP3-207ENST00000485983 CAPN9O14815 690 aa11.73□□□□□ -0.53
SRGAP3-207ENST00000485983 CCNA1P78396 465 aa11.73□□□□□ -0.53
SRGAP3-207ENST00000485983 KRT222Q8N1A0 295 aa11.73□□□□□ -0.53
SRGAP3-207ENST00000485983 DBNDD2Q9BQY9 259 aa11.73□□□□□ -0.53
SRGAP3-207ENST00000485983 ZNF518AQ6AHZ1 1483 aa11.73□□□□□ -0.53
SRGAP3-207ENST00000485983 ESYT2A0FGR8 921 aa11.73□□□□□ -0.53
SRGAP3-207ENST00000485983 ALAS1P13196 640 aa11.73□□□□□ -0.53
SRGAP3-207ENST00000485983 ATP2B4P23634 1241 aa11.73□□□□□ -0.53
SRGAP3-207ENST00000485983 CHMLP26374 656 aa11.73□□□□□ -0.53
SRGAP3-207ENST00000485983 TFAP4Q01664 338 aa11.73□□□□□ -0.53
SRGAP3-207ENST00000485983 SLC9C1Q4G0N8 1177 aa11.73□□□□□ -0.53
SRGAP3-207ENST00000485983 SND1Q7KZF4 910 aaKnown RBP eCLIP11.73□□□□□ -0.53
SRGAP3-207ENST00000485983 SDCCAG8Q86SQ7 713 aaPredicted RBP11.73□□□□□ -0.53
SRGAP3-207ENST00000485983 DIS3L2Q8IYB7 885 aaKnown RBP11.73□□□□□ -0.53
SRGAP3-207ENST00000485983 PPFIBP2Q8ND30 876 aa11.73□□□□□ -0.53
SRGAP3-207ENST00000485983 VPS16Q9H269 839 aa11.73□□□□□ -0.53
SRGAP3-207ENST00000485983 CLSTN2Q9H4D0 955 aa11.73□□□□□ -0.53
SRGAP3-207ENST00000485983 ZNF277Q9NRM2 450 aaPredicted RBP11.73□□□□□ -0.53
SRGAP3-207ENST00000485983 MRPL11Q9Y3B7 192 aaKnown RBP11.73□□□□□ -0.53
SRGAP3-207ENST00000485983 ZMYM3Q14202 1370 aa11.73□□□□□ -0.53
SRGAP3-207ENST00000485983 TPH2Q8IWU9 490 aa11.73□□□□□ -0.53
SRGAP3-207ENST00000485983 ABI1Q8IZP0 508 aa11.73□□□□□ -0.53
SRGAP3-207ENST00000485983 RSPH14Q9UHP6 348 aa11.73□□□□□ -0.53
SRGAP3-207ENST00000485983 UTP11Q9Y3A2 253 aaKnown RBP11.73□□□□□ -0.53
SRGAP3-207ENST00000485983 ZEB2O60315 1214 aa11.73□□□□□ -0.53
SRGAP3-207ENST00000485983 ANO1Q5XXA6 986 aa11.73□□□□□ -0.53
SRGAP3-207ENST00000485983 NCAPG2Q86XI2 1143 aa11.73□□□□□ -0.53
SRGAP3-207ENST00000485983 MCF2L2Q86YR7 1114 aa11.73□□□□□ -0.53
SRGAP3-207ENST00000485983 REXO1Q8N1G1 1221 aaKnown RBP11.73□□□□□ -0.53
SRGAP3-207ENST00000485983 ZNF594Q96JF6 807 aaPredicted RBP11.73□□□□□ -0.53
SRGAP3-207ENST00000485983 NT5C3AQ9H0P0 336 aa11.73□□□□□ -0.53
SRGAP3-207ENST00000485983 ATP8A2Q9NTI2 1148 aa11.73□□□□□ -0.53
SRGAP3-207ENST00000485983 KCNH3Q9ULD8 1083 aa11.73□□□□□ -0.53
SRGAP3-207ENST00000485983 A0A1B0GVL5 298 aa11.73□□□□□ -0.53
SRGAP3-207ENST00000485983 MRRFQ96E11 262 aaKnown RBP11.73□□□□□ -0.53
SRGAP3-207ENST00000485983 ST7Q9NRC1 585 aa11.73□□□□□ -0.53
SRGAP3-207ENST00000485983 PCDHB15Q9Y5E8 787 aa11.73□□□□□ -0.53
SRGAP3-207ENST00000485983 H0YCG3 227 aa11.72□□□□□ -0.53
SRGAP3-207ENST00000485983 RPS6KB1P23443 525 aa11.72□□□□□ -0.53
SRGAP3-207ENST00000485983 NOLC1Q14978 699 aaKnown RBP eCLIP11.72□□□□□ -0.53
SRGAP3-207ENST00000485983 STMN2Q93045 179 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms