RNA–Protein interactions for RNA: ENST00000485399.5

NECAB3-211, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 2

Gene NECAB3, Length 1,373 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-211ENST00000485399 RABEP1Q15276 862 aa25.77■■□□□ 1.72
NECAB3-211ENST00000485399 C16orf86Q6ZW13 317 aa25.77■■□□□ 1.72
NECAB3-211ENST00000485399 RALYLQ86SE5 291 aaKnown RBP25.77■■□□□ 1.72
NECAB3-211ENST00000485399 STK11IPQ8N1F8 1099 aa25.77■■□□□ 1.72
NECAB3-211ENST00000485399 DYNLL2Q96FJ2 89 aa25.77■■□□□ 1.72
NECAB3-211ENST00000485399 GBA2Q9HCG7 927 aaPredicted RBP25.77■■□□□ 1.72
NECAB3-211ENST00000485399 SWAP70Q9UH65 585 aa25.77■■□□□ 1.72
NECAB3-211ENST00000485399 GABPAQ06546 454 aa25.76■■□□□ 1.71
NECAB3-211ENST00000485399 CRACR2BQ8N4Y2 399 aaPredicted RBP25.76■■□□□ 1.71
NECAB3-211ENST00000485399 IL27Q8NEV9 243 aa25.76■■□□□ 1.71
NECAB3-211ENST00000485399 TRIM34Q9BYJ4 488 aa25.76■■□□□ 1.71
NECAB3-211ENST00000485399 TOMM22Q9NS69 142 aa25.76■■□□□ 1.71
NECAB3-211ENST00000485399 DDX52Q9Y2R4 599 aaKnown RBP eCLIP25.76■■□□□ 1.712e-6■■□□□ 12.1
NECAB3-211ENST00000485399 SIPA1L1O43166 1804 aa25.75■■□□□ 1.71
NECAB3-211ENST00000485399 ORC4O43929 436 aa25.75■■□□□ 1.71
NECAB3-211ENST00000485399 CASTP20810 708 aaKnown RBP25.75■■□□□ 1.71
NECAB3-211ENST00000485399 CDK8P49336 464 aa25.75■■□□□ 1.71
NECAB3-211ENST00000485399 BLOC1S2Q6QNY1 142 aa25.75■■□□□ 1.71
NECAB3-211ENST00000485399 METTL16Q86W50 562 aaKnown RBP25.75■■□□□ 1.71
NECAB3-211ENST00000485399 SULF1Q8IWU6 871 aa25.75■■□□□ 1.71
NECAB3-211ENST00000485399 MKNK2Q9HBH9 465 aa25.75■■□□□ 1.71
NECAB3-211ENST00000485399 ZSWIM6Q9HCJ5 1215 aa25.75■■□□□ 1.71
NECAB3-211ENST00000485399 INCENPQ9NQS7 918 aa25.75■■□□□ 1.71
NECAB3-211ENST00000485399 SCAF8Q9UPN6 1271 aaKnown RBP25.75■■□□□ 1.71
NECAB3-211ENST00000485399 TACC3Q9Y6A5 838 aa25.75■■□□□ 1.71
NECAB3-211ENST00000485399 NEDD4P46934 1319 aa25.74■■□□□ 1.71
NECAB3-211ENST00000485399 RGMBQ6NW40 437 aa25.74■■□□□ 1.71
NECAB3-211ENST00000485399 HOOK2Q96ED9 719 aa25.74■■□□□ 1.71
NECAB3-211ENST00000485399 TEPSINQ96N21 525 aa25.74■■□□□ 1.71
NECAB3-211ENST00000485399 HERC5Q9UII4 1024 aaKnown RBP25.74■■□□□ 1.71
NECAB3-211ENST00000485399 CYP46A1Q9Y6A2 500 aa25.74■■□□□ 1.71
NECAB3-211ENST00000485399 RRP12Q5JTH9 1297 aaKnown RBP25.73■■□□□ 1.71
NECAB3-211ENST00000485399 ESR2Q92731 530 aa25.73■■□□□ 1.71
NECAB3-211ENST00000485399 B4E1Z4 1266 aa25.72■■□□□ 1.71
NECAB3-211ENST00000485399 RUFY3Q7L099 469 aa25.72■■□□□ 1.71
NECAB3-211ENST00000485399 ZNF444Q8N0Y2 327 aaPredicted RBP25.72■■□□□ 1.71
NECAB3-211ENST00000485399 C2orf69Q8N8R5 385 aa25.72■■□□□ 1.71
NECAB3-211ENST00000485399 MYH8P13535 1937 aa25.72■■□□□ 1.71
NECAB3-211ENST00000485399 TBC1D12O60347 775 aa25.71■■□□□ 1.71
NECAB3-211ENST00000485399 PRDM1O75626 825 aa25.71■■□□□ 1.71
NECAB3-211ENST00000485399 MCM5P33992 734 aa25.71■■□□□ 1.71
NECAB3-211ENST00000485399 DHX32Q7L7V1 743 aaKnown RBP25.71■■□□□ 1.71
NECAB3-211ENST00000485399 MB21D2Q8IYB1 491 aaPredicted RBP25.71■■□□□ 1.71
NECAB3-211ENST00000485399 SLC44A5Q8NCS7 719 aa25.71■■□□□ 1.71
NECAB3-211ENST00000485399 XPO5Q9HAV4 1204 aaKnown RBP eCLIP25.71■■□□□ 1.711e-8■□□□□ 10.8
NECAB3-211ENST00000485399 RPS6KB1P23443 525 aa25.7■■□□□ 1.71
NECAB3-211ENST00000485399 NEK4P51957 841 aa25.7■■□□□ 1.71
NECAB3-211ENST00000485399 CDCA5Q96FF9 252 aa25.7■■□□□ 1.71
NECAB3-211ENST00000485399 UPF3BQ9BZI7 483 aaKnown RBP25.7■■□□□ 1.71
NECAB3-211ENST00000485399 RANBP6O60518 1105 aaKnown RBP25.69■■□□□ 1.7
NECAB3-211ENST00000485399 KDM4AO75164 1064 aa25.69■■□□□ 1.7
NECAB3-211ENST00000485399 RASA1P20936 1047 aa25.69■■□□□ 1.7
NECAB3-211ENST00000485399 MAP3K10Q02779 954 aa25.69■■□□□ 1.7
NECAB3-211ENST00000485399 SUPT20HL1Q3ZLR7 823 aa25.69■■□□□ 1.7
NECAB3-211ENST00000485399 CDAN1Q8IWY9 1227 aa25.69■■□□□ 1.7
NECAB3-211ENST00000485399 WDR19Q8NEZ3 1342 aa25.69■■□□□ 1.7
NECAB3-211ENST00000485399 CPA1P15085 419 aa25.69■■□□□ 1.7
NECAB3-211ENST00000485399 SHMT1P34896 483 aa25.69■■□□□ 1.7
NECAB3-211ENST00000485399 NBPF12Q5TAG4 269 aaPredicted RBP25.69■■□□□ 1.7
NECAB3-211ENST00000485399 DCAF15Q66K64 600 aa25.69■■□□□ 1.7
NECAB3-211ENST00000485399 TATDN1Q6P1N9 297 aa25.69■■□□□ 1.7
NECAB3-211ENST00000485399 CCDC102AQ96A19 550 aa25.69■■□□□ 1.7
NECAB3-211ENST00000485399 DNAJC18Q9H819 358 aa25.69■■□□□ 1.7
NECAB3-211ENST00000485399 ZSWIM5Q9P217 1185 aa25.69■■□□□ 1.7
NECAB3-211ENST00000485399 TSPY2A6NKD2 308 aa25.68■■□□□ 1.7
NECAB3-211ENST00000485399 EXOSC10Q01780 885 aaKnown RBP25.68■■□□□ 1.7
NECAB3-211ENST00000485399 CCDC17Q96LX7 622 aa25.68■■□□□ 1.7
NECAB3-211ENST00000485399 MCOLN1Q9GZU1 580 aa25.68■■□□□ 1.7
NECAB3-211ENST00000485399 PDRG1Q9NUG6 133 aa25.68■■□□□ 1.7
NECAB3-211ENST00000485399 PRC1O43663 620 aa25.67■■□□□ 1.7
NECAB3-211ENST00000485399 ST18O60284 1047 aa25.67■■□□□ 1.7
NECAB3-211ENST00000485399 SLC10A3P09131 477 aa25.67■■□□□ 1.7
NECAB3-211ENST00000485399 ZNF157P51786 506 aaPredicted RBP25.67■■□□□ 1.7
NECAB3-211ENST00000485399 KIF23Q02241 960 aaPredicted RBP25.67■■□□□ 1.7
NECAB3-211ENST00000485399 CYB5R4Q7L1T6 521 aa25.67■■□□□ 1.7
NECAB3-211ENST00000485399 MTA3Q9BTC8 594 aa25.67■■□□□ 1.7
NECAB3-211ENST00000485399 RBM19Q9Y4C8 960 aaKnown RBP25.67■■□□□ 1.7
NECAB3-211ENST00000485399 PAPPA2Q9BXP8 1791 aa25.66■■□□□ 1.7
NECAB3-211ENST00000485399 CCDC85CA6NKD9 419 aa25.66■■□□□ 1.7
NECAB3-211ENST00000485399 FAM196BA6NMK8 535 aa25.66■■□□□ 1.7
NECAB3-211ENST00000485399 TSPY3P0CV98 308 aa25.66■■□□□ 1.7
NECAB3-211ENST00000485399 TSPY8P0CW00 308 aa25.66■■□□□ 1.7
NECAB3-211ENST00000485399 TFAP4Q01664 338 aa25.66■■□□□ 1.7
NECAB3-211ENST00000485399 CERKLQ49MI3 558 aaPredicted RBP25.66■■□□□ 1.7
NECAB3-211ENST00000485399 FAM47AQ5JRC9 791 aa25.66■■□□□ 1.7
NECAB3-211ENST00000485399 PRAMEF18Q5VWM3 479 aa25.66■■□□□ 1.7
NECAB3-211ENST00000485399 MIGA2Q7L4E1 593 aa25.66■■□□□ 1.7
NECAB3-211ENST00000485399 IQCA1Q86XH1 822 aa25.66■■□□□ 1.7
NECAB3-211ENST00000485399 ALDH8A1Q9H2A2 487 aaPredicted RBP25.66■■□□□ 1.7
NECAB3-211ENST00000485399 SLURP2P0DP57 97 aa25.65■■□□□ 1.7
NECAB3-211ENST00000485399 ANTXR2P58335 489 aa25.65■■□□□ 1.7
NECAB3-211ENST00000485399 COL9A3Q14050 684 aaPredicted RBP25.65■■□□□ 1.7
NECAB3-211ENST00000485399 SART3Q15020 963 aaKnown RBP25.65■■□□□ 1.7
NECAB3-211ENST00000485399 TMEM87BQ96K49 555 aa25.65■■□□□ 1.7
NECAB3-211ENST00000485399 TTC14Q96N46 770 aa25.65■■□□□ 1.7
NECAB3-211ENST00000485399 TNRC18O15417 2968 aaPredicted RBP25.64■■□□□ 1.7
NECAB3-211ENST00000485399 CCDC178Q5BJE1 867 aa25.64■■□□□ 1.69
NECAB3-211ENST00000485399 CHST3Q7LGC8 479 aa25.64■■□□□ 1.69
NECAB3-211ENST00000485399 NEDD1Q8NHV4 660 aa25.64■■□□□ 1.69
NECAB3-211ENST00000485399 NKX2-3Q8TAU0 364 aa25.64■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms