RNA–Protein interactions for RNA: ENST00000481260.1

RAPGEF1-207, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 1,034 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-207ENST00000481260 GPATCH3Q96I76 525 aa13.77□□□□□ -0.21
RAPGEF1-207ENST00000481260 STRBPQ96SI9 672 aaKnown RBP13.77□□□□□ -0.21
RAPGEF1-207ENST00000481260 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.77□□□□□ -0.21
RAPGEF1-207ENST00000481260 ZFYVE28Q9HCC9 887 aa13.77□□□□□ -0.21
RAPGEF1-207ENST00000481260 ZBTB21Q9ULJ3 1066 aa13.77□□□□□ -0.21
RAPGEF1-207ENST00000481260 PTPRFP10586 1907 aa13.76□□□□□ -0.21
RAPGEF1-207ENST00000481260 RNF113AO15541 343 aaKnown RBP13.76□□□□□ -0.21
RAPGEF1-207ENST00000481260 POLR3DP05423 398 aaPredicted RBP13.76□□□□□ -0.21
RAPGEF1-207ENST00000481260 HLA-DOAP06340 250 aa13.76□□□□□ -0.21
RAPGEF1-207ENST00000481260 MTMR2Q13614 643 aa13.76□□□□□ -0.21
RAPGEF1-207ENST00000481260 TATDN1Q6P1N9 297 aa13.76□□□□□ -0.21
RAPGEF1-207ENST00000481260 CCDC129Q6ZRS4 1044 aa13.76□□□□□ -0.21
RAPGEF1-207ENST00000481260 OTOP1Q7RTM1 612 aa13.76□□□□□ -0.21
RAPGEF1-207ENST00000481260 STK11IPQ8N1F8 1099 aa13.76□□□□□ -0.21
RAPGEF1-207ENST00000481260 ZNF280CQ8ND82 737 aa13.76□□□□□ -0.21
RAPGEF1-207ENST00000481260 ACER1Q8TDN7 264 aa13.76□□□□□ -0.21
RAPGEF1-207ENST00000481260 EPB41L4AQ9HCS5 686 aaPredicted RBP13.76□□□□□ -0.21
RAPGEF1-207ENST00000481260 STAP2Q9UGK3 403 aa13.76□□□□□ -0.21
RAPGEF1-207ENST00000481260 SERPINB13Q9UIV8 391 aa13.76□□□□□ -0.21
RAPGEF1-207ENST00000481260 TRIM17Q9Y577 477 aa13.76□□□□□ -0.21
RAPGEF1-207ENST00000481260 SLC4A4Q9Y6R1 1079 aa13.76□□□□□ -0.21
RAPGEF1-207ENST00000481260 MYH7P12883 1935 aa13.76□□□□□ -0.21
RAPGEF1-207ENST00000481260 BAZ2AQ9UIF9 1905 aaKnown RBP13.75□□□□□ -0.21
RAPGEF1-207ENST00000481260 USP17L5A8MUK1 530 aa13.75□□□□□ -0.21
RAPGEF1-207ENST00000481260 GSG1L2A8MUP6 293 aa13.75□□□□□ -0.21
RAPGEF1-207ENST00000481260 USP17L12C9JPN9 530 aa13.75□□□□□ -0.21
RAPGEF1-207ENST00000481260 USP17L21D6R901 530 aa13.75□□□□□ -0.21
RAPGEF1-207ENST00000481260 TLR2O60603 784 aa13.75□□□□□ -0.21
RAPGEF1-207ENST00000481260 GLRX3O76003 335 aaKnown RBP13.75□□□□□ -0.21
RAPGEF1-207ENST00000481260 SP3Q02447 781 aa13.75□□□□□ -0.21
RAPGEF1-207ENST00000481260 C17orf99Q6UX52 265 aa13.75□□□□□ -0.21
RAPGEF1-207ENST00000481260 EHD4Q9H223 541 aa13.75□□□□□ -0.21
RAPGEF1-207ENST00000481260 HPS5Q9UPZ3 1129 aa13.75□□□□□ -0.21
RAPGEF1-207ENST00000481260 MKI67P46013 3256 aaKnown RBP13.75□□□□□ -0.21
RAPGEF1-207ENST00000481260 FOXP2O15409 715 aa13.74□□□□□ -0.21
RAPGEF1-207ENST00000481260 GPAA1O43292 621 aa13.74□□□□□ -0.21
RAPGEF1-207ENST00000481260 PDE4AP27815 886 aa13.74□□□□□ -0.21
RAPGEF1-207ENST00000481260 NUCB1Q02818 461 aa13.74□□□□□ -0.21
RAPGEF1-207ENST00000481260 CTR9Q6PD62 1173 aa13.74□□□□□ -0.21
RAPGEF1-207ENST00000481260 TMED8Q6PL24 325 aaPredicted RBP13.74□□□□□ -0.21
RAPGEF1-207ENST00000481260 POTEEQ6S8J3 1075 aa13.74□□□□□ -0.21
RAPGEF1-207ENST00000481260 CHD1LQ86WJ1 897 aa13.74□□□□□ -0.21
RAPGEF1-207ENST00000481260 APPBP2Q92624 585 aa13.74□□□□□ -0.21
RAPGEF1-207ENST00000481260 FSD1Q9BTV5 496 aa13.74□□□□□ -0.21
RAPGEF1-207ENST00000481260 TRIM34Q9BYJ4 488 aa13.74□□□□□ -0.21
RAPGEF1-207ENST00000481260 RWDD1Q9H446 243 aaPredicted RBP13.74□□□□□ -0.21
RAPGEF1-207ENST00000481260 ASNSP08243 561 aa13.73□□□□□ -0.21
RAPGEF1-207ENST00000481260 BCRP11274 1271 aa13.73□□□□□ -0.21
RAPGEF1-207ENST00000481260 AKR1B1P15121 316 aa13.73□□□□□ -0.21
RAPGEF1-207ENST00000481260 SEPT2Q15019 361 aa13.73□□□□□ -0.21
RAPGEF1-207ENST00000481260 RAB3GAP1Q15042 981 aa13.73□□□□□ -0.21
RAPGEF1-207ENST00000481260 ZYXQ15942 572 aaKnown RBP13.73□□□□□ -0.21
RAPGEF1-207ENST00000481260 CERKLQ49MI3 558 aaPredicted RBP13.73□□□□□ -0.21
RAPGEF1-207ENST00000481260 KIAA1755Q5JYT7 1200 aa13.73□□□□□ -0.21
RAPGEF1-207ENST00000481260 C12orf60Q5U649 245 aa13.73□□□□□ -0.21
RAPGEF1-207ENST00000481260 TTC6Q86TZ1 520 aa13.73□□□□□ -0.21
RAPGEF1-207ENST00000481260 CERS3Q8IU89 383 aa13.73□□□□□ -0.21
RAPGEF1-207ENST00000481260 PLEKHM2Q8IWE5 1019 aa13.73□□□□□ -0.21
RAPGEF1-207ENST00000481260 WDR18Q9BV38 432 aa13.73□□□□□ -0.21
RAPGEF1-207ENST00000481260 EMILIN3Q9NT22 766 aa13.73□□□□□ -0.21
RAPGEF1-207ENST00000481260 AGTPBP1Q9UPW5 1226 aa13.73□□□□□ -0.21
RAPGEF1-207ENST00000481260 TNRC18O15417 2968 aaPredicted RBP13.73□□□□□ -0.21
RAPGEF1-207ENST00000481260 A0A1W2PRG0 241 aa13.72□□□□□ -0.21
RAPGEF1-207ENST00000481260 ERC2O15083 957 aa13.72□□□□□ -0.21
RAPGEF1-207ENST00000481260 SOX10P56693 466 aa13.72□□□□□ -0.21
RAPGEF1-207ENST00000481260 BACE1P56817 501 aa13.72□□□□□ -0.21
RAPGEF1-207ENST00000481260 LACTBP83111 547 aaPredicted RBP13.72□□□□□ -0.21
RAPGEF1-207ENST00000481260 ABCB5Q2M3G0 1257 aa13.72□□□□□ -0.21
RAPGEF1-207ENST00000481260 ZMYM1Q5SVZ6 1142 aa13.72□□□□□ -0.21
RAPGEF1-207ENST00000481260 VPS53Q5VIR6 699 aa13.72□□□□□ -0.21
RAPGEF1-207ENST00000481260 ZSCAN25Q6NSZ9 544 aa13.72□□□□□ -0.21
RAPGEF1-207ENST00000481260 FASTKD5Q7L8L6 764 aaKnown RBP13.72□□□□□ -0.21
RAPGEF1-207ENST00000481260 SKAP1Q86WV1 359 aa13.72□□□□□ -0.21
RAPGEF1-207ENST00000481260 SIAH1Q8IUQ4 282 aa13.72□□□□□ -0.21
RAPGEF1-207ENST00000481260 TRIM47Q96LD4 638 aa13.72□□□□□ -0.21
RAPGEF1-207ENST00000481260 FAM227BQ96M60 508 aa13.72□□□□□ -0.21
RAPGEF1-207ENST00000481260 ZCCHC17Q9NP64 241 aaKnown RBP13.72□□□□□ -0.21
RAPGEF1-207ENST00000481260 ATP8A2Q9NTI2 1148 aa13.72□□□□□ -0.21
RAPGEF1-207ENST00000481260 LOC285556D6RIA3 1793 aa13.72□□□□□ -0.21
RAPGEF1-207ENST00000481260 CDK8P49336 464 aa13.71□□□□□ -0.21
RAPGEF1-207ENST00000481260 AAMPQ13685 434 aa13.71□□□□□ -0.21
RAPGEF1-207ENST00000481260 SH3D19Q5HYK7 790 aa13.71□□□□□ -0.21
RAPGEF1-207ENST00000481260 FBXO46Q6PJ61 603 aaPredicted RBP13.71□□□□□ -0.21
RAPGEF1-207ENST00000481260 ERO1AQ96HE7 468 aa13.71□□□□□ -0.21
RAPGEF1-207ENST00000481260 PARK7Q99497 189 aaKnown RBP13.71□□□□□ -0.21
RAPGEF1-207ENST00000481260 ASCC2Q9H1I8 757 aaPredicted RBP13.71□□□□□ -0.21
RAPGEF1-207ENST00000481260 EFCC1Q9HA90 598 aa13.71□□□□□ -0.21
RAPGEF1-207ENST00000481260 PTPN22Q9Y2R2 807 aa13.71□□□□□ -0.21
RAPGEF1-207ENST00000481260 TACC3Q9Y6A5 838 aa13.71□□□□□ -0.21
RAPGEF1-207ENST00000481260 PTCH2Q9Y6C5 1203 aa13.71□□□□□ -0.21
RAPGEF1-207ENST00000481260 A0A0D9SFI3 127 aa13.7□□□□□ -0.22
RAPGEF1-207ENST00000481260 MPHOSPH10O00566 681 aaKnown RBP13.7□□□□□ -0.22
RAPGEF1-207ENST00000481260 ANKRD13CQ8N6S4 541 aa13.7□□□□□ -0.22
RAPGEF1-207ENST00000481260 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.7□□□□□ -0.22
RAPGEF1-207ENST00000481260 INCENPQ9NQS7 918 aa13.7□□□□□ -0.22
RAPGEF1-207ENST00000481260 MINDY4BA8MYZ0 360 aa13.69□□□□□ -0.22
RAPGEF1-207ENST00000481260 USP17L10C9JJH3 530 aa13.69□□□□□ -0.22
RAPGEF1-207ENST00000481260 MYCP01106 439 aaPredicted RBP13.69□□□□□ -0.22
RAPGEF1-207ENST00000481260 PSMC4P43686 418 aa13.69□□□□□ -0.22
RAPGEF1-207ENST00000481260 C16orf86Q6ZW13 317 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms