RNA–Protein interactions for RNA: ENST00000479994.1

HCLS1-206, Transcript of hematopoietic cell-specific Lyn substrate 1, human

TSL 3

Gene HCLS1, Length 450 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HCLS1-206	ENST00000479994	FKBP1B	P68106	108 aa		13.67	□□□□□ -0.22
HCLS1-206	ENST00000479994	TRDN	Q13061	729 aa		13.67	□□□□□ -0.22
HCLS1-206	ENST00000479994	MKRN3	Q13064	507 aa	Known RBP	13.67	□□□□□ -0.22
HCLS1-206	ENST00000479994	NECTIN1	Q15223	517 aa		13.67	□□□□□ -0.22
HCLS1-206	ENST00000479994	SLC4A8	Q2Y0W8	1093 aa		13.67	□□□□□ -0.22
HCLS1-206	ENST00000479994	TSGA10IP	Q3SY00	556 aa		13.67	□□□□□ -0.22
HCLS1-206	ENST00000479994	RBM26	Q5T8P6	1007 aa	Known RBP	13.67	□□□□□ -0.22
HCLS1-206	ENST00000479994	GPR153	Q6NV75	609 aa		13.67	□□□□□ -0.22
HCLS1-206	ENST00000479994	SULF1	Q8IWU6	871 aa		13.67	□□□□□ -0.22
HCLS1-206	ENST00000479994	TGFBRAP1	Q8WUH2	860 aa		13.67	□□□□□ -0.22
HCLS1-206	ENST00000479994	FAM151A	Q8WW52	585 aa		13.67	□□□□□ -0.22
HCLS1-206	ENST00000479994	MTMR10	Q9NXD2	777 aa		13.67	□□□□□ -0.22
HCLS1-206	ENST00000479994	MCM9	Q9NXL9	1143 aa		13.67	□□□□□ -0.22
HCLS1-206	ENST00000479994	ZNF70	Q9UC06	446 aa	Predicted RBP	13.67	□□□□□ -0.22
HCLS1-206	ENST00000479994	ATRNL1	Q5VV63	1379 aa		13.67	□□□□□ -0.22
HCLS1-206	ENST00000479994	UBE2Q2L	H0YL09	131 aa		13.66	□□□□□ -0.22
HCLS1-206	ENST00000479994	WDHD1	O75717	1129 aa	Predicted RBP	13.66	□□□□□ -0.22
HCLS1-206	ENST00000479994	PDE4B	Q07343	736 aa		13.66	□□□□□ -0.22
HCLS1-206	ENST00000479994	SREBF2	Q12772	1141 aa		13.66	□□□□□ -0.22
HCLS1-206	ENST00000479994	KCNB2	Q92953	911 aa		13.66	□□□□□ -0.22
HCLS1-206	ENST00000479994	TRIM34	Q9BYJ4	488 aa		13.66	□□□□□ -0.22
HCLS1-206	ENST00000479994	OSBPL5	Q9H0X9	879 aa	Predicted RBP	13.66	□□□□□ -0.22
HCLS1-206	ENST00000479994	EHD4	Q9H223	541 aa		13.66	□□□□□ -0.22
HCLS1-206	ENST00000479994	TDRD3	Q9H7E2	651 aa	Known RBP	13.66	□□□□□ -0.22
HCLS1-206	ENST00000479994	SWAP70	Q9UH65	585 aa		13.66	□□□□□ -0.22
HCLS1-206	ENST00000479994	ROBO3	Q96MS0	1386 aa		13.66	□□□□□ -0.22
HCLS1-206	ENST00000479994	ASTN2	O75129	1339 aa	Predicted RBP	13.65	□□□□□ -0.22
HCLS1-206	ENST00000479994	CHGB	P05060	677 aa		13.65	□□□□□ -0.22
HCLS1-206	ENST00000479994	HOXD11	P31277	338 aa	Predicted RBP	13.65	□□□□□ -0.22
HCLS1-206	ENST00000479994	PTH1R	Q03431	593 aa		13.65	□□□□□ -0.22
HCLS1-206	ENST00000479994	SLFNL1	Q499Z3	407 aa		13.65	□□□□□ -0.22
HCLS1-206	ENST00000479994	PPP4R3B	Q5MIZ7	849 aa		13.65	□□□□□ -0.22
HCLS1-206	ENST00000479994	CREB3L3	Q68CJ9	461 aa		13.65	□□□□□ -0.22
HCLS1-206	ENST00000479994	FOXP4	Q8IVH2	680 aa	Predicted RBP	13.65	□□□□□ -0.22
HCLS1-206	ENST00000479994	CD99L2	Q8TCZ2	262 aa		13.65	□□□□□ -0.22
HCLS1-206	ENST00000479994	SDR42E1	Q8WUS8	393 aa		13.65	□□□□□ -0.22
HCLS1-206	ENST00000479994	IL17RA	Q96F46	866 aa		13.65	□□□□□ -0.22
HCLS1-206	ENST00000479994	TBC1D32	Q96NH3	1257 aa		13.65	□□□□□ -0.22
HCLS1-206	ENST00000479994	TM6SF1	Q9BZW5	370 aa		13.65	□□□□□ -0.22
HCLS1-206	ENST00000479994	KRT23	Q9C075	422 aa		13.65	□□□□□ -0.22
HCLS1-206	ENST00000479994	GGA3	Q9NZ52	723 aa		13.65	□□□□□ -0.22
HCLS1-206	ENST00000479994	PI4KB	Q9UBF8	816 aa		13.65	□□□□□ -0.22
HCLS1-206	ENST00000479994	CAP1	Q01518	475 aa		13.64	□□□□□ -0.23
HCLS1-206	ENST00000479994	PPARA	Q07869	468 aa		13.64	□□□□□ -0.23
HCLS1-206	ENST00000479994	C12orf60	Q5U649	245 aa		13.64	□□□□□ -0.23
HCLS1-206	ENST00000479994	VPS53	Q5VIR6	699 aa		13.64	□□□□□ -0.23
HCLS1-206	ENST00000479994	MAPKAPK5	Q8IW41	473 aa		13.64	□□□□□ -0.23
HCLS1-206	ENST00000479994	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	13.64	□□□□□ -0.23
HCLS1-206	ENST00000479994	FAM122A	Q96E09	287 aa		13.64	□□□□□ -0.23
HCLS1-206	ENST00000479994	ERO1A	Q96HE7	468 aa		13.64	□□□□□ -0.23
HCLS1-206	ENST00000479994	MTA3	Q9BTC8	594 aa		13.64	□□□□□ -0.23
HCLS1-206	ENST00000479994	IL25	Q9H293	177 aa		13.64	□□□□□ -0.23
HCLS1-206	ENST00000479994	EFCC1	Q9HA90	598 aa		13.64	□□□□□ -0.23
HCLS1-206	ENST00000479994	VEZT	Q9HBM0	779 aa		13.64	□□□□□ -0.23
HCLS1-206	ENST00000479994	HERC5	Q9UII4	1024 aa	Known RBP	13.64	□□□□□ -0.23
HCLS1-206	ENST00000479994	USP17L12	C9JPN9	530 aa		13.63	□□□□□ -0.23
HCLS1-206	ENST00000479994	USP17L21	D6R901	530 aa		13.63	□□□□□ -0.23
HCLS1-206	ENST00000479994	SLC27A2	O14975	620 aa		13.63	□□□□□ -0.23
HCLS1-206	ENST00000479994	PRKAB2	O43741	272 aa		13.63	□□□□□ -0.23
HCLS1-206	ENST00000479994	SEC24B	O95487	1268 aa		13.63	□□□□□ -0.23
HCLS1-206	ENST00000479994	MYC	P01106	439 aa	Predicted RBP	13.63	□□□□□ -0.23
HCLS1-206	ENST00000479994	PICALM	Q13492	652 aa		13.63	□□□□□ -0.23
HCLS1-206	ENST00000479994	NBPF9	Q3BBW0	867 aa		13.63	□□□□□ -0.23
HCLS1-206	ENST00000479994	SUPT20HL1	Q3ZLR7	823 aa		13.63	□□□□□ -0.23
HCLS1-206	ENST00000479994	CCDC178	Q5BJE1	867 aa		13.63	□□□□□ -0.23
HCLS1-206	ENST00000479994	CTR9	Q6PD62	1173 aa		13.63	□□□□□ -0.23
HCLS1-206	ENST00000479994	MFSD6	Q6ZSS7	791 aa		13.63	□□□□□ -0.23
HCLS1-206	ENST00000479994	RALYL	Q86SE5	291 aa	Known RBP	13.63	□□□□□ -0.23
HCLS1-206	ENST00000479994	STAG1	Q8WVM7	1258 aa		13.63	□□□□□ -0.23
HCLS1-206	ENST00000479994	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	13.63	□□□□□ -0.23
HCLS1-206	ENST00000479994	SERPINB13	Q9UIV8	391 aa		13.63	□□□□□ -0.23
HCLS1-206	ENST00000479994	WDR19	Q8NEZ3	1342 aa		13.63	□□□□□ -0.23
HCLS1-206	ENST00000479994	EYS	Q5T1H1	3165 aa		13.63	□□□□□ -0.23
HCLS1-206	ENST00000479994	MINDY4B	A8MYZ0	360 aa		13.62	□□□□□ -0.23
HCLS1-206	ENST00000479994	FOXP2	O15409	715 aa		13.62	□□□□□ -0.23
HCLS1-206	ENST00000479994	TBC1D12	O60347	775 aa		13.62	□□□□□ -0.23
HCLS1-206	ENST00000479994	ALDH1A1	P00352	501 aa		13.62	□□□□□ -0.23
HCLS1-206	ENST00000479994	AKNAD1	Q5T1N1	836 aa		13.62	□□□□□ -0.23
HCLS1-206	ENST00000479994	DCAF15	Q66K64	600 aa		13.62	□□□□□ -0.23
HCLS1-206	ENST00000479994	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	13.62	□□□□□ -0.23
HCLS1-206	ENST00000479994	NCOA7	Q8NI08	942 aa		13.62	□□□□□ -0.23
HCLS1-206	ENST00000479994	GINM1	Q9NU53	330 aa		13.62	□□□□□ -0.23
HCLS1-206	ENST00000479994	FAM198A	Q9UFP1	575 aa		13.62	□□□□□ -0.23
HCLS1-206	ENST00000479994	MUC3A	Q02505	3323 aa		13.62	□□□□□ -0.23
HCLS1-206	ENST00000479994	SIPA1L1	O43166	1804 aa		13.62	□□□□□ -0.23
HCLS1-206	ENST00000479994	ATAD5	Q96QE3	1844 aa		13.62	□□□□□ -0.23
HCLS1-206	ENST00000479994	CLRN2	A0PK11	232 aa		13.61	□□□□□ -0.23
HCLS1-206	ENST00000479994	TCP10L2	B9ZVM9	353 aa		13.61	□□□□□ -0.23
HCLS1-206	ENST00000479994	ORC4	O43929	436 aa		13.61	□□□□□ -0.23
HCLS1-206	ENST00000479994	CYP21A2	P08686	494 aa		13.61	□□□□□ -0.23
HCLS1-206	ENST00000479994	NF2	P35240	595 aa		13.61	□□□□□ -0.23
HCLS1-206	ENST00000479994	SART3	Q15020	963 aa	Known RBP	13.61	□□□□□ -0.23
HCLS1-206	ENST00000479994	RABEP1	Q15276	862 aa		13.61	□□□□□ -0.23
HCLS1-206	ENST00000479994	SLC9C1	Q4G0N8	1177 aa		13.61	□□□□□ -0.23
HCLS1-206	ENST00000479994	ANGEL2	Q5VTE6	544 aa	Known RBP	13.61	□□□□□ -0.23
HCLS1-206	ENST00000479994	NBPF11	Q86T75	865 aa		13.61	□□□□□ -0.23
HCLS1-206	ENST00000479994	METTL16	Q86W50	562 aa	Known RBP	13.61	□□□□□ -0.23
HCLS1-206	ENST00000479994	ESR2	Q92731	530 aa		13.61	□□□□□ -0.23
HCLS1-206	ENST00000479994	DEFB129	Q9H1M3	183 aa		13.61	□□□□□ -0.23
HCLS1-206	ENST00000479994	MKNK2	Q9HBH9	465 aa		13.61	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms