RNA–Protein interactions for RNA: ENST00000479536.2

NF1-209, Transcript of neurofibromin 1, humanhuman

TSL 3

Gene NF1, Length 811 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-209ENST00000479536 KRTAP9-3Q9BYQ3 159 aa5.56□□□□□ -1.52
NF1-209ENST00000479536 GGT7Q9UJ14 662 aa5.56□□□□□ -1.52
NF1-209ENST00000479536 NFIBO00712 420 aa5.55□□□□□ -1.52
NF1-209ENST00000479536 SLFN14P0C7P3 912 aa5.55□□□□□ -1.52
NF1-209ENST00000479536 C1QTNF9P0C862 333 aa5.55□□□□□ -1.52
NF1-209ENST00000479536 ID3Q02535 119 aa5.55□□□□□ -1.52
NF1-209ENST00000479536 ZP2Q05996 745 aa5.55□□□□□ -1.52
NF1-209ENST00000479536 AP3B2Q13367 1082 aa5.55□□□□□ -1.52
NF1-209ENST00000479536 GRM2Q14416 872 aa5.55□□□□□ -1.52
NF1-209ENST00000479536 ZC3H12CQ9C0D7 883 aaKnown RBP5.55□□□□□ -1.52
NF1-209ENST00000479536 ZNF576Q9H609 170 aa5.55□□□□□ -1.52
NF1-209ENST00000479536 CTNND2Q9UQB3 1225 aa5.55□□□□□ -1.52
NF1-209ENST00000479536 INPP5FQ9Y2H2 1132 aa5.55□□□□□ -1.52
NF1-209ENST00000479536 HCLS1P14317 486 aaPredicted RBP5.54□□□□□ -1.52
NF1-209ENST00000479536 AFMP43652 599 aa5.54□□□□□ -1.52
NF1-209ENST00000479536 TTLL4Q14679 1199 aa5.54□□□□□ -1.52
NF1-209ENST00000479536 KIAA0319Q5VV43 1072 aa5.54□□□□□ -1.52
NF1-209ENST00000479536 TOP6BLQ8N6T0 577 aa5.54□□□□□ -1.52
NF1-209ENST00000479536 GMLQ99445 158 aa5.54□□□□□ -1.52
NF1-209ENST00000479536 KRTAP17-1Q9BYP8 105 aa5.54□□□□□ -1.52
NF1-209ENST00000479536 TNKS2Q9H2K2 1166 aa5.54□□□□□ -1.52
NF1-209ENST00000479536 CCDC86Q9H6F5 360 aaKnown RBP5.54□□□□□ -1.52
NF1-209ENST00000479536 DISC1Q9NRI5 854 aa5.54□□□□□ -1.52
NF1-209ENST00000479536 GLI1P08151 1106 aa5.53□□□□□ -1.52
NF1-209ENST00000479536 INHBBP09529 407 aa5.53□□□□□ -1.52
NF1-209ENST00000479536 ATP2B1P20020 1258 aa5.53□□□□□ -1.52
NF1-209ENST00000479536 GSTT1P30711 240 aa5.53□□□□□ -1.52
NF1-209ENST00000479536 DNAJA1P31689 397 aaKnown RBP5.53□□□□□ -1.52
NF1-209ENST00000479536 ERMP1Q7Z2K6 904 aa5.53□□□□□ -1.52
NF1-209ENST00000479536 ASB11Q8WXH4 323 aa5.53□□□□□ -1.52
NF1-209ENST00000479536 EHD4Q9H223 541 aa5.53□□□□□ -1.52
NF1-209ENST00000479536 PPP4R2Q9NY27 417 aa5.53□□□□□ -1.52
NF1-209ENST00000479536 RAPGEFL1Q9UHV5 662 aa5.53□□□□□ -1.52
NF1-209ENST00000479536 PCOLCE2Q9UKZ9 415 aa5.53□□□□□ -1.52
NF1-209ENST00000479536 TRAK1Q9UPV9 953 aa5.53□□□□□ -1.52
NF1-209ENST00000479536 SNX11Q9Y5W9 270 aa5.53□□□□□ -1.52
NF1-209ENST00000479536 NPIPB6E9PJ23 425 aa5.52□□□□□ -1.53
NF1-209ENST00000479536 ARID5AQ03989 594 aa5.52□□□□□ -1.53
NF1-209ENST00000479536 C3orf58Q8NDZ4 430 aa5.52□□□□□ -1.53
NF1-209ENST00000479536 DHX38Q92620 1227 aaKnown RBP5.52□□□□□ -1.53
NF1-209ENST00000479536 KIRREL1Q96J84 757 aa5.52□□□□□ -1.53
NF1-209ENST00000479536 DNAJC2Q99543 621 aaKnown RBP5.52□□□□□ -1.53
NF1-209ENST00000479536 SSU72Q9NP77 194 aaKnown RBP5.52□□□□□ -1.53
NF1-209ENST00000479536 COPRSQ9NQ92 184 aa5.52□□□□□ -1.53
NF1-209ENST00000479536 TTF2Q9UNY4 1162 aaKnown RBP5.52□□□□□ -1.53
NF1-209ENST00000479536 ZNF862O60290 1169 aa5.51□□□□□ -1.53
NF1-209ENST00000479536 KRT1P04264 644 aa5.51□□□□□ -1.53
NF1-209ENST00000479536 GTF2F1P35269 517 aaKnown RBP eCLIP5.51□□□□□ -1.53
NF1-209ENST00000479536 ZNF157P51786 506 aaPredicted RBP5.51□□□□□ -1.53
NF1-209ENST00000479536 TMEM67Q5HYA8 995 aa5.51□□□□□ -1.53
NF1-209ENST00000479536 FAM177A1Q8N128 213 aaPredicted RBP5.51□□□□□ -1.53
NF1-209ENST00000479536 ARMC5Q96C12 935 aa5.51□□□□□ -1.53
NF1-209ENST00000479536 HEXIM2Q96MH2 286 aaKnown RBP5.51□□□□□ -1.53
NF1-209ENST00000479536 DIRC2Q96SL1 478 aa5.51□□□□□ -1.53
NF1-209ENST00000479536 NOC4LQ9BVI4 516 aaKnown RBP5.51□□□□□ -1.53
NF1-209ENST00000479536 ITPKAP23677 461 aa5.5□□□□□ -1.53
NF1-209ENST00000479536 GJA8P48165 433 aa5.5□□□□□ -1.53
NF1-209ENST00000479536 FCGRTP55899 365 aa5.5□□□□□ -1.53
NF1-209ENST00000479536 CTSWP56202 376 aa5.5□□□□□ -1.53
NF1-209ENST00000479536 PAK2Q13177 524 aa5.5□□□□□ -1.53
NF1-209ENST00000479536 PRPF40BQ6NWY9 871 aaKnown RBP5.5□□□□□ -1.53
NF1-209ENST00000479536 CYFIP1Q7L576 1253 aa5.5□□□□□ -1.53
NF1-209ENST00000479536 DPH6Q7L8W6 267 aa5.5□□□□□ -1.53
NF1-209ENST00000479536 VPS37DQ86XT2 251 aa5.5□□□□□ -1.53
NF1-209ENST00000479536 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.5□□□□□ -1.53
NF1-209ENST00000479536 FBXO15Q8NCQ5 510 aaPredicted RBP5.5□□□□□ -1.53
NF1-209ENST00000479536 NSUN3Q9H649 340 aaKnown RBP5.5□□□□□ -1.53
NF1-209ENST00000479536 KBTBD4Q9NVX7 518 aa5.5□□□□□ -1.53
NF1-209ENST00000479536 NEFMP07197 916 aa5.49□□□□□ -1.53
NF1-209ENST00000479536 TMEM253P0C7T8 217 aa5.49□□□□□ -1.53
NF1-209ENST00000479536 XRCC5P13010 732 aaKnown RBP5.49□□□□□ -1.53
NF1-209ENST00000479536 HNRNPUQ00839 825 aaKnown RBP eCLIP5.49□□□□□ -1.53
NF1-209ENST00000479536 CCDC85BQ15834 202 aaPredicted RBP5.49□□□□□ -1.53
NF1-209ENST00000479536 KIF4BQ2VIQ3 1234 aa5.49□□□□□ -1.53
NF1-209ENST00000479536 AMIGO3Q86WK7 504 aa5.49□□□□□ -1.53
NF1-209ENST00000479536 SPACA3Q8IXA5 215 aa5.49□□□□□ -1.53
NF1-209ENST00000479536 ANKRD24Q8TF21 1146 aa5.49□□□□□ -1.53
NF1-209ENST00000479536 ISL2Q96A47 359 aa5.49□□□□□ -1.53
NF1-209ENST00000479536 RSRP1Q9BUV0 290 aa5.49□□□□□ -1.53
NF1-209ENST00000479536 ABCB6Q9NP58 842 aa5.49□□□□□ -1.53
NF1-209ENST00000479536 GTF2IRD1Q9UHL9 959 aa5.49□□□□□ -1.53
NF1-209ENST00000479536 PPM1HQ9ULR3 514 aa5.49□□□□□ -1.53
NF1-209ENST00000479536 PCDHGC5Q9Y5F6 944 aa5.49□□□□□ -1.53
NF1-209ENST00000479536 TMEM238LA0A1B0GVL6 79 aa5.48□□□□□ -1.53
NF1-209ENST00000479536 SMARCA5O60264 1052 aaPredicted RBP5.48□□□□□ -1.53
NF1-209ENST00000479536 FGRP09769 529 aa5.48□□□□□ -1.53
NF1-209ENST00000479536 ATF4P18848 351 aaPredicted RBP5.48□□□□□ -1.53
NF1-209ENST00000479536 PWP1Q13610 501 aa5.48□□□□□ -1.53
NF1-209ENST00000479536 CIAPIN1Q6FI81 312 aa5.48□□□□□ -1.53
NF1-209ENST00000479536 DTHD1Q6ZMT9 781 aa5.48□□□□□ -1.53
NF1-209ENST00000479536 GPRASP2Q96D09 838 aa5.48□□□□□ -1.53
NF1-209ENST00000479536 SPON2Q9BUD6 331 aa5.48□□□□□ -1.53
NF1-209ENST00000479536 LNPKQ9C0E8 428 aa5.48□□□□□ -1.53
NF1-209ENST00000479536 AKAP2Q9Y2D5 859 aa5.48□□□□□ -1.53
NF1-209ENST00000479536 FBXO24O75426 580 aa5.47□□□□□ -1.53
NF1-209ENST00000479536 GSTP1P09211 210 aaKnown RBP5.47□□□□□ -1.53
NF1-209ENST00000479536 RBL2Q08999 1139 aa5.47□□□□□ -1.53
NF1-209ENST00000479536 KCNA10Q16322 511 aa5.47□□□□□ -1.53
NF1-209ENST00000479536 NKPD1Q17RQ9 610 aa5.47□□□□□ -1.53
NF1-209ENST00000479536 ATG14Q6ZNE5 492 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms