RNA–Protein interactions for RNA: ENST00000478245.1

TCTN3-205, Transcript of tectonic family member 3, humanhuman

TSL 2

Gene TCTN3, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCTN3-205ENST00000478245 UTYO14607 1347 aa11.72□□□□□ -0.53
TCTN3-205ENST00000478245 KBTBD13C9JR72 458 aa11.72□□□□□ -0.53
TCTN3-205ENST00000478245 EYA2O00167 538 aa11.72□□□□□ -0.53
TCTN3-205ENST00000478245 SEMA3EO15041 775 aa11.72□□□□□ -0.53
TCTN3-205ENST00000478245 MYCNP04198 464 aaPredicted RBP11.72□□□□□ -0.53
TCTN3-205ENST00000478245 HOXA7P31268 230 aaPredicted RBP11.72□□□□□ -0.53
TCTN3-205ENST00000478245 HOXD11P31277 338 aaPredicted RBP11.72□□□□□ -0.53
TCTN3-205ENST00000478245 ATP2B2Q01814 1243 aa11.72□□□□□ -0.53
TCTN3-205ENST00000478245 MAP2K5Q13163 448 aa11.72□□□□□ -0.53
TCTN3-205ENST00000478245 GRIN2CQ14957 1233 aa11.72□□□□□ -0.53
TCTN3-205ENST00000478245 GJC2Q5T442 439 aaPredicted RBP11.72□□□□□ -0.53
TCTN3-205ENST00000478245 WDR78Q5VTH9 848 aa11.72□□□□□ -0.53
TCTN3-205ENST00000478245 SLC39A5Q6ZMH5 540 aa11.72□□□□□ -0.53
TCTN3-205ENST00000478245 ARRDC4Q8NCT1 418 aa11.72□□□□□ -0.53
TCTN3-205ENST00000478245 ADAMTS19Q8TE59 1207 aa11.72□□□□□ -0.53
TCTN3-205ENST00000478245 ATXN2LQ8WWM7 1075 aaKnown RBP11.72□□□□□ -0.53
TCTN3-205ENST00000478245 RBPJLQ9UBG7 517 aa11.72□□□□□ -0.53
TCTN3-205ENST00000478245 ABCF2Q9UG63 623 aa11.72□□□□□ -0.53
TCTN3-205ENST00000478245 BACE1P56817 501 aa11.71□□□□□ -0.53
TCTN3-205ENST00000478245 ATP2B3Q16720 1220 aa11.71□□□□□ -0.53
TCTN3-205ENST00000478245 Q3C1V9 767 aa11.71□□□□□ -0.53
TCTN3-205ENST00000478245 NCBP3Q53F19 620 aaKnown RBP11.71□□□□□ -0.53
TCTN3-205ENST00000478245 SPTY2D1Q68D10 685 aaPredicted RBP11.71□□□□□ -0.53
TCTN3-205ENST00000478245 GTF3C2Q8WUA4 911 aaPredicted RBP11.71□□□□□ -0.53
TCTN3-205ENST00000478245 ASB2Q96Q27 587 aa11.71□□□□□ -0.53
TCTN3-205ENST00000478245 GAS2L1Q99501 681 aaPredicted RBP11.71□□□□□ -0.53
TCTN3-205ENST00000478245 THEGQ9P2T0 379 aa11.71□□□□□ -0.53
TCTN3-205ENST00000478245 NDUFB9Q9Y6M9 179 aa11.71□□□□□ -0.53
TCTN3-205ENST00000478245 PLXNA1Q9UIW2 1896 aa11.7□□□□□ -0.54
TCTN3-205ENST00000478245 C19orf81C9J6K1 198 aa11.7□□□□□ -0.54
TCTN3-205ENST00000478245 PHKA1P46020 1223 aa11.7□□□□□ -0.54
TCTN3-205ENST00000478245 TRIM60Q495X7 471 aa11.7□□□□□ -0.54
TCTN3-205ENST00000478245 FAM163AQ96GL9 167 aaPredicted RBP11.7□□□□□ -0.54
TCTN3-205ENST00000478245 UHRF1Q96T88 793 aaPredicted RBP11.7□□□□□ -0.54
TCTN3-205ENST00000478245 WDR18Q9BV38 432 aa11.7□□□□□ -0.54
TCTN3-205ENST00000478245 ZNF576Q9H609 170 aa11.7□□□□□ -0.54
TCTN3-205ENST00000478245 PDLIM7Q9NR12 457 aa11.7□□□□□ -0.54
TCTN3-205ENST00000478245 FLRT1Q9NZU1 646 aa11.7□□□□□ -0.54
TCTN3-205ENST00000478245 IVNS1ABPQ9Y6Y0 642 aa11.7□□□□□ -0.54
TCTN3-205ENST00000478245 SMCHD1A6NHR9 2005 aa11.7□□□□□ -0.54
TCTN3-205ENST00000478245 CDK5RAP2Q96SN8 1893 aa11.7□□□□□ -0.54
TCTN3-205ENST00000478245 MROH7-TTC4A0A0A0MT08 1334 aa11.69□□□□□ -0.54
TCTN3-205ENST00000478245 ASNSP08243 561 aa11.69□□□□□ -0.54
TCTN3-205ENST00000478245 DNAJB2P25686 324 aa11.69□□□□□ -0.54
TCTN3-205ENST00000478245 CYP2C19P33261 490 aa11.69□□□□□ -0.54
TCTN3-205ENST00000478245 CCNA1P78396 465 aa11.69□□□□□ -0.54
TCTN3-205ENST00000478245 MRPS5P82675 430 aaKnown RBP11.69□□□□□ -0.54
TCTN3-205ENST00000478245 RRP1BQ14684 758 aaKnown RBP11.69□□□□□ -0.54
TCTN3-205ENST00000478245 SH3RF1Q7Z6J0 888 aa11.69□□□□□ -0.54
TCTN3-205ENST00000478245 C1QTNF1Q9BXJ1 281 aa11.69□□□□□ -0.54
TCTN3-205ENST00000478245 CEP126Q9P2H0 1117 aa11.69□□□□□ -0.54
TCTN3-205ENST00000478245 MUC6Q6W4X9 2439 aa11.68□□□□□ -0.54
TCTN3-205ENST00000478245 GPR75-ASB3A0A0A6YYF3 556 aa11.68□□□□□ -0.54
TCTN3-205ENST00000478245 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.68□□□□□ -0.54
TCTN3-205ENST00000478245 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.68□□□□□ -0.54
TCTN3-205ENST00000478245 TRIM43BA6NCK2 446 aa11.68□□□□□ -0.54
TCTN3-205ENST00000478245 SLC15A5A6NIM6 579 aa11.68□□□□□ -0.54
TCTN3-205ENST00000478245 USP17L10C9JJH3 530 aa11.68□□□□□ -0.54
TCTN3-205ENST00000478245 NPM3O75607 178 aaKnown RBP11.68□□□□□ -0.54
TCTN3-205ENST00000478245 RHBDL3P58872 404 aa11.68□□□□□ -0.54
TCTN3-205ENST00000478245 FERMT2Q96AC1 680 aa11.68□□□□□ -0.54
TCTN3-205ENST00000478245 TRIM43Q96BQ3 446 aaPredicted RBP11.68□□□□□ -0.54
TCTN3-205ENST00000478245 SIL1Q9H173 461 aa11.68□□□□□ -0.54
TCTN3-205ENST00000478245 PRKRIP1Q9H875 184 aaPredicted RBP11.68□□□□□ -0.54
TCTN3-205ENST00000478245 HERC5Q9UII4 1024 aaKnown RBP11.68□□□□□ -0.54
TCTN3-205ENST00000478245 CHD9Q3L8U1 2897 aa11.67□□□□□ -0.54
TCTN3-205ENST00000478245 LDHCP07864 332 aa11.67□□□□□ -0.54
TCTN3-205ENST00000478245 ADCYAP1R1P41586 468 aa11.67□□□□□ -0.54
TCTN3-205ENST00000478245 MECOMQ03112 1051 aa11.67□□□□□ -0.54
TCTN3-205ENST00000478245 TLE2Q04725 743 aa11.67□□□□□ -0.54
TCTN3-205ENST00000478245 ANO1Q5XXA6 986 aa11.67□□□□□ -0.54
TCTN3-205ENST00000478245 CCDC102BQ68D86 513 aa11.67□□□□□ -0.54
TCTN3-205ENST00000478245 ERICH6Q7L0X2 663 aa11.67□□□□□ -0.54
TCTN3-205ENST00000478245 ATG9AQ7Z3C6 839 aa11.67□□□□□ -0.54
TCTN3-205ENST00000478245 TIFAQ96CG3 184 aa11.67□□□□□ -0.54
TCTN3-205ENST00000478245 TRIM34Q9BYJ4 488 aa11.67□□□□□ -0.54
TCTN3-205ENST00000478245 RABGAP1Q9Y3P9 1069 aa11.67□□□□□ -0.54
TCTN3-205ENST00000478245 HCN4Q9Y3Q4 1203 aa11.67□□□□□ -0.54
TCTN3-205ENST00000478245 TACC3Q9Y6A5 838 aa11.67□□□□□ -0.54
TCTN3-205ENST00000478245 MAP4K4O95819 1239 aaPredicted RBP11.66□□□□□ -0.54
TCTN3-205ENST00000478245 RAG1P15918 1043 aa11.66□□□□□ -0.54
TCTN3-205ENST00000478245 PTPREP23469 700 aa11.66□□□□□ -0.54
TCTN3-205ENST00000478245 EPHB4P54760 987 aa11.66□□□□□ -0.54
TCTN3-205ENST00000478245 GSTO1P78417 241 aa11.66□□□□□ -0.54
TCTN3-205ENST00000478245 FPGSQ05932 587 aa11.66□□□□□ -0.54
TCTN3-205ENST00000478245 RASGRF1Q13972 1273 aa11.66□□□□□ -0.54
TCTN3-205ENST00000478245 SNX17Q15036 470 aa11.66□□□□□ -0.54
TCTN3-205ENST00000478245 CCDC85BQ15834 202 aaPredicted RBP11.66□□□□□ -0.54
TCTN3-205ENST00000478245 AKNAD1Q5T1N1 836 aa11.66□□□□□ -0.54
TCTN3-205ENST00000478245 POTEEQ6S8J3 1075 aa11.66□□□□□ -0.54
TCTN3-205ENST00000478245 TRPV1Q8NER1 839 aa11.66□□□□□ -0.54
TCTN3-205ENST00000478245 NPLOC4Q8TAT6 608 aa11.66□□□□□ -0.54
TCTN3-205ENST00000478245 PI4KBQ9UBF8 816 aa11.66□□□□□ -0.54
TCTN3-205ENST00000478245 SALL2Q9Y467 1007 aaPredicted RBP11.66□□□□□ -0.54
TCTN3-205ENST00000478245 ZNFX1Q9P2E3 1918 aaKnown RBP11.66□□□□□ -0.54
TCTN3-205ENST00000478245 SIPA1L1O43166 1804 aa11.65□□□□□ -0.54
TCTN3-205ENST00000478245 CLTBP09497 229 aa11.65□□□□□ -0.54
TCTN3-205ENST00000478245 HOXC6P09630 235 aa11.65□□□□□ -0.54
TCTN3-205ENST00000478245 CYBAP13498 195 aa11.65□□□□□ -0.54
TCTN3-205ENST00000478245 ADORA1P30542 326 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms