RNA–Protein interactions for RNA: ENST00000477893.1

ERCC8-205, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 2

Gene ERCC8, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-205ENST00000477893 ZNF512BQ96KM6 892 aaPredicted RBP10.09□□□□□ -0.79
ERCC8-205ENST00000477893 OSBPL5Q9H0X9 879 aaPredicted RBP10.09□□□□□ -0.79
ERCC8-205ENST00000477893 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.09□□□□□ -0.79
ERCC8-205ENST00000477893 FLT1P17948 1338 aa10.08□□□□□ -0.8
ERCC8-205ENST00000477893 TESPA1A2RU30 521 aaPredicted RBP10.08□□□□□ -0.8
ERCC8-205ENST00000477893 TRIM75PA6NK02 468 aa10.08□□□□□ -0.8
ERCC8-205ENST00000477893 BTBD19C9JJ37 291 aa10.08□□□□□ -0.8
ERCC8-205ENST00000477893 RAB11FIP3O75154 756 aa10.08□□□□□ -0.8
ERCC8-205ENST00000477893 SOX10P56693 466 aa10.08□□□□□ -0.8
ERCC8-205ENST00000477893 PPATQ06203 517 aa10.08□□□□□ -0.8
ERCC8-205ENST00000477893 SCYL3Q8IZE3 742 aa10.08□□□□□ -0.8
ERCC8-205ENST00000477893 TRIM34Q9BYJ4 488 aa10.08□□□□□ -0.8
ERCC8-205ENST00000477893 ZNF112Q9UJU3 913 aa10.08□□□□□ -0.8
ERCC8-205ENST00000477893 TRIM17Q9Y577 477 aa10.08□□□□□ -0.8
ERCC8-205ENST00000477893 ZHX2Q9Y6X8 837 aa10.08□□□□□ -0.8
ERCC8-205ENST00000477893 MYO5AQ9Y4I1 1855 aaKnown RBP10.08□□□□□ -0.8
ERCC8-205ENST00000477893 PHF20L1A8MW92 1017 aa10.07□□□□□ -0.8
ERCC8-205ENST00000477893 USP5P45974 858 aa10.07□□□□□ -0.8
ERCC8-205ENST00000477893 MAP3K12Q12852 859 aa10.07□□□□□ -0.8
ERCC8-205ENST00000477893 NOL9Q5SY16 702 aaKnown RBP10.07□□□□□ -0.8
ERCC8-205ENST00000477893 TSHZ3Q63HK5 1081 aa10.07□□□□□ -0.8
ERCC8-205ENST00000477893 GADL1Q6ZQY3 521 aa10.07□□□□□ -0.8
ERCC8-205ENST00000477893 CRACR2BQ8N4Y2 399 aaPredicted RBP10.07□□□□□ -0.8
ERCC8-205ENST00000477893 CRBNQ96SW2 442 aa10.07□□□□□ -0.8
ERCC8-205ENST00000477893 MFRPQ9BY79 579 aa10.07□□□□□ -0.8
ERCC8-205ENST00000477893 LRRCC1Q9C099 1032 aa10.07□□□□□ -0.8
ERCC8-205ENST00000477893 BOLA2Q9H3K6 86 aa10.07□□□□□ -0.8
ERCC8-205ENST00000477893 ZFYVE28Q9HCC9 887 aa10.07□□□□□ -0.8
ERCC8-205ENST00000477893 PALD1Q9ULE6 856 aa10.07□□□□□ -0.8
ERCC8-205ENST00000477893 HPS5Q9UPZ3 1129 aa10.07□□□□□ -0.8
ERCC8-205ENST00000477893 LAMB1P07942 1786 aa10.06□□□□□ -0.8
ERCC8-205ENST00000477893 PDHXO00330 501 aa10.06□□□□□ -0.8
ERCC8-205ENST00000477893 GDF11O95390 407 aa10.06□□□□□ -0.8
ERCC8-205ENST00000477893 PTPRAP18433 802 aa10.06□□□□□ -0.8
ERCC8-205ENST00000477893 SLFNL1Q499Z3 407 aa10.06□□□□□ -0.8
ERCC8-205ENST00000477893 SLC9C2Q5TAH2 1124 aa10.06□□□□□ -0.8
ERCC8-205ENST00000477893 TMC2Q8TDI7 906 aa10.06□□□□□ -0.8
ERCC8-205ENST00000477893 CFHR5Q9BXR6 569 aa10.06□□□□□ -0.8
ERCC8-205ENST00000477893 IRX2Q9BZI1 471 aaPredicted RBP10.06□□□□□ -0.8
ERCC8-205ENST00000477893 DOCK1Q14185 1865 aa10.05□□□□□ -0.8
ERCC8-205ENST00000477893 MAGEB6P1A0A0J9YX57 407 aa10.05□□□□□ -0.8
ERCC8-205ENST00000477893 CTNND1O60716 968 aaKnown RBP10.05□□□□□ -0.8
ERCC8-205ENST00000477893 MAP4K4O95819 1239 aaPredicted RBP10.05□□□□□ -0.8
ERCC8-205ENST00000477893 CHGBP05060 677 aa10.05□□□□□ -0.8
ERCC8-205ENST00000477893 PDE6AP16499 860 aa10.05□□□□□ -0.8
ERCC8-205ENST00000477893 PTPN5P54829 565 aa10.05□□□□□ -0.8
ERCC8-205ENST00000477893 PPP4CP60510 307 aa10.05□□□□□ -0.8
ERCC8-205ENST00000477893 CAP1Q01518 475 aa10.05□□□□□ -0.8
ERCC8-205ENST00000477893 SP3Q02447 781 aa10.05□□□□□ -0.8
ERCC8-205ENST00000477893 RRP1BQ14684 758 aaKnown RBP10.05□□□□□ -0.8
ERCC8-205ENST00000477893 TTF1Q15361 905 aaPredicted RBP10.05□□□□□ -0.8
ERCC8-205ENST00000477893 SHROOM1Q2M3G4 852 aaPredicted RBP10.05□□□□□ -0.8
ERCC8-205ENST00000477893 OTOP1Q7RTM1 612 aa10.05□□□□□ -0.8
ERCC8-205ENST00000477893 ERO1AQ96HE7 468 aa10.05□□□□□ -0.8
ERCC8-205ENST00000477893 ARHGAP39Q9C0H5 1083 aa10.05□□□□□ -0.8
ERCC8-205ENST00000477893 EFCC1Q9HA90 598 aa10.05□□□□□ -0.8
ERCC8-205ENST00000477893 PAG1Q9NWQ8 432 aa10.05□□□□□ -0.8
ERCC8-205ENST00000477893 CPA4Q9UI42 421 aa10.05□□□□□ -0.8
ERCC8-205ENST00000477893 KCNH4Q9UQ05 1017 aa10.05□□□□□ -0.8
ERCC8-205ENST00000477893 STK24Q9Y6E0 443 aa10.05□□□□□ -0.8
ERCC8-205ENST00000477893 ZNF532Q9HCE3 1301 aa10.05□□□□□ -0.8
ERCC8-205ENST00000477893 COL2A1P02458 1487 aaPredicted RBP10.04□□□□□ -0.8
ERCC8-205ENST00000477893 HLA-DOAP06340 250 aa10.04□□□□□ -0.8
ERCC8-205ENST00000477893 CYP2C8P10632 490 aa10.04□□□□□ -0.8
ERCC8-205ENST00000477893 NOM1Q5C9Z4 860 aaKnown RBP10.04□□□□□ -0.8
ERCC8-205ENST00000477893 ANKRD23Q86SG2 305 aa10.04□□□□□ -0.8
ERCC8-205ENST00000477893 DNAJC18Q9H819 358 aa10.04□□□□□ -0.8
ERCC8-205ENST00000477893 PI4KBQ9UBF8 816 aa10.04□□□□□ -0.8
ERCC8-205ENST00000477893 PCDHB15Q9Y5E8 787 aa10.04□□□□□ -0.8
ERCC8-205ENST00000477893 ZSWIM8A7E2V4 1837 aa10.03□□□□□ -0.8
ERCC8-205ENST00000477893 SIPA1L1O43166 1804 aa10.03□□□□□ -0.8
ERCC8-205ENST00000477893 A0A0G2JLL6 359 aaPredicted RBP10.03□□□□□ -0.8
ERCC8-205ENST00000477893 TBC1D12O60347 775 aa10.03□□□□□ -0.8
ERCC8-205ENST00000477893 MYCP01106 439 aaPredicted RBP10.03□□□□□ -0.8
ERCC8-205ENST00000477893 MAP3K10Q02779 954 aa10.03□□□□□ -0.8
ERCC8-205ENST00000477893 SPP2Q13103 211 aa10.03□□□□□ -0.8
ERCC8-205ENST00000477893 MOGSQ13724 837 aa10.03□□□□□ -0.8
ERCC8-205ENST00000477893 PKN2Q16513 984 aaKnown RBP10.03□□□□□ -0.8
ERCC8-205ENST00000477893 TREML2Q5T2D2 321 aa10.03□□□□□ -0.8
ERCC8-205ENST00000477893 FBXO46Q6PJ61 603 aaPredicted RBP10.03□□□□□ -0.8
ERCC8-205ENST00000477893 PRRT2Q7Z6L0 340 aaPredicted RBP10.03□□□□□ -0.8
ERCC8-205ENST00000477893 LCORLQ8N3X6 602 aa10.03□□□□□ -0.8
ERCC8-205ENST00000477893 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.03□□□□□ -0.8
ERCC8-205ENST00000477893 SDR42E1Q8WUS8 393 aa10.03□□□□□ -0.8
ERCC8-205ENST00000477893 CDK5RAP2Q96SN8 1893 aa10.03□□□□□ -0.8
ERCC8-205ENST00000477893 PARK7Q99497 189 aaKnown RBP10.03□□□□□ -0.8
ERCC8-205ENST00000477893 DHX36Q9H2U1 1008 aaKnown RBP10.03□□□□□ -0.8
ERCC8-205ENST00000477893 ARMT1Q9H993 441 aa10.03□□□□□ -0.8
ERCC8-205ENST00000477893 HERC5Q9UII4 1024 aaKnown RBP10.03□□□□□ -0.8
ERCC8-205ENST00000477893 AFG3L2Q9Y4W6 797 aa10.03□□□□□ -0.8
ERCC8-205ENST00000477893 CXCL11O14625 94 aa10.02□□□□□ -0.81
ERCC8-205ENST00000477893 TLR2O60603 784 aa10.02□□□□□ -0.81
ERCC8-205ENST00000477893 MBD4O95243 580 aa10.02□□□□□ -0.81
ERCC8-205ENST00000477893 POLR3DP05423 398 aaPredicted RBP10.02□□□□□ -0.81
ERCC8-205ENST00000477893 ATP5JP18859 108 aa10.02□□□□□ -0.81
ERCC8-205ENST00000477893 CAP2P40123 477 aa10.02□□□□□ -0.81
ERCC8-205ENST00000477893 HMGCS2P54868 508 aa10.02□□□□□ -0.81
ERCC8-205ENST00000477893 JAG1P78504 1218 aa10.02□□□□□ -0.81
ERCC8-205ENST00000477893 KIF22Q14807 665 aa10.02□□□□□ -0.81
ERCC8-205ENST00000477893 GPAT2Q6NUI2 795 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms