RNA–Protein interactions for RNA: ENST00000477554.5

PTPN7-209, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 2

Gene PTPN7, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-209ENST00000477554 BRCA2P51587 3418 aa21.3■■□□□ 1
PTPN7-209ENST00000477554 LOC285556D6RIA3 1793 aa21.3■■□□□ 1
PTPN7-209ENST00000477554 HLA-DOAP06340 250 aa21.29■■□□□ 1
PTPN7-209ENST00000477554 GABPAQ06546 454 aa21.29■■□□□ 1
PTPN7-209ENST00000477554 ANKRD23Q86SG2 305 aa21.29■■□□□ 1
PTPN7-209ENST00000477554 HMGCS2P54868 508 aa21.29■■□□□ 1
PTPN7-209ENST00000477554 TATDN1Q6P1N9 297 aa21.29■■□□□ 1
PTPN7-209ENST00000477554 ZFYVE28Q9HCC9 887 aa21.29■■□□□ 1
PTPN7-209ENST00000477554 SERPINB13Q9UIV8 391 aa21.29■■□□□ 1
PTPN7-209ENST00000477554 ZBTB21Q9ULJ3 1066 aa21.29■■□□□ 1
PTPN7-209ENST00000477554 RNF113AO15541 343 aaKnown RBP21.28■■□□□ 1
PTPN7-209ENST00000477554 TLR2O60603 784 aa21.28■■□□□ 1
PTPN7-209ENST00000477554 GH2P01242 217 aa21.28■■□□□ 1
PTPN7-209ENST00000477554 POLR3DP05423 398 aaPredicted RBP21.28■■□□□ 1
PTPN7-209ENST00000477554 GUCY1A2P33402 732 aa21.28■■□□□ 1
PTPN7-209ENST00000477554 PDE1AP54750 535 aa21.28■■□□□ 1
PTPN7-209ENST00000477554 SP3Q02447 781 aa21.28■■□□□ 1
PTPN7-209ENST00000477554 TMED8Q6PL24 325 aaPredicted RBP21.28■■□□□ 1
PTPN7-209ENST00000477554 OTOP1Q7RTM1 612 aa21.28■■□□□ 1
PTPN7-209ENST00000477554 ZNF280CQ8ND82 737 aa21.28■■□□□ 1
PTPN7-209ENST00000477554 STRBPQ96SI9 672 aaKnown RBP21.28■■□□□ 1
PTPN7-209ENST00000477554 RWDD1Q9H446 243 aaPredicted RBP21.28■■□□□ 1
PTPN7-209ENST00000477554 SLC4A4Q9Y6R1 1079 aa21.28■■□□□ 1
PTPN7-209ENST00000477554 CCDC85CA6NKD9 419 aa21.27■■□□□ 1
PTPN7-209ENST00000477554 USP17L5A8MUK1 530 aa21.27■■□□□ 1
PTPN7-209ENST00000477554 GLRX3O76003 335 aaKnown RBP21.27■■□□□ 1
PTPN7-209ENST00000477554 MTMR2Q13614 643 aa21.27■■□□□ 1
PTPN7-209ENST00000477554 C17orf99Q6UX52 265 aa21.27■■□□□ 1
PTPN7-209ENST00000477554 CERS3Q8IU89 383 aa21.27■■□□□ 1
PTPN7-209ENST00000477554 TRIM34Q9BYJ4 488 aa21.27■■□□□ 1
PTPN7-209ENST00000477554 EHD4Q9H223 541 aa21.27■■□□□ 1
PTPN7-209ENST00000477554 STAP2Q9UGK3 403 aa21.27■■□□□ 1
PTPN7-209ENST00000477554 TRIM17Q9Y577 477 aa21.27■■□□□ 1
PTPN7-209ENST00000477554 PEX10O60683 326 aa21.26■□□□□ 0.99
PTPN7-209ENST00000477554 EPB41L4AQ9HCS5 686 aaPredicted RBP21.26■□□□□ 0.99
PTPN7-209ENST00000477554 USP17L12C9JPN9 530 aa21.25■□□□□ 0.99
PTPN7-209ENST00000477554 USP17L21D6R901 530 aa21.25■□□□□ 0.99
PTPN7-209ENST00000477554 CCDC129Q6ZRS4 1044 aa21.25■□□□□ 0.99
PTPN7-209ENST00000477554 TTC6Q86TZ1 520 aa21.25■□□□□ 0.99
PTPN7-209ENST00000477554 CLEC10AQ8IUN9 316 aa21.25■□□□□ 0.99
PTPN7-209ENST00000477554 APPBP2Q92624 585 aa21.25■□□□□ 0.99
PTPN7-209ENST00000477554 HPS5Q9UPZ3 1129 aa21.25■□□□□ 0.99
PTPN7-209ENST00000477554 GSG1L2A8MUP6 293 aa21.24■□□□□ 0.99
PTPN7-209ENST00000477554 ERC2O15083 957 aa21.24■□□□□ 0.99
PTPN7-209ENST00000477554 NUCB1Q02818 461 aa21.24■□□□□ 0.99
PTPN7-209ENST00000477554 CTR9Q6PD62 1173 aa21.24■□□□□ 0.99
PTPN7-209ENST00000477554 STK11IPQ8N1F8 1099 aa21.24■□□□□ 0.99
PTPN7-209ENST00000477554 ACER1Q8TDN7 264 aa21.24■□□□□ 0.99
PTPN7-209ENST00000477554 FSD1Q9BTV5 496 aa21.24■□□□□ 0.99
PTPN7-209ENST00000477554 GPAA1O43292 621 aa21.23■□□□□ 0.99
PTPN7-209ENST00000477554 ASNSP08243 561 aa21.23■□□□□ 0.99
PTPN7-209ENST00000477554 CERKLQ49MI3 558 aaPredicted RBP21.23■□□□□ 0.99
PTPN7-209ENST00000477554 ZSCAN25Q6NSZ9 544 aa21.23■□□□□ 0.99
PTPN7-209ENST00000477554 CHD1LQ86WJ1 897 aa21.23■□□□□ 0.99
PTPN7-209ENST00000477554 WDR18Q9BV38 432 aa21.23■□□□□ 0.99
PTPN7-209ENST00000477554 ZCCHC17Q9NP64 241 aaKnown RBP21.23■□□□□ 0.99
PTPN7-209ENST00000477554 AGTPBP1Q9UPW5 1226 aa21.23■□□□□ 0.99
PTPN7-209ENST00000477554 FOXP2O15409 715 aa21.22■□□□□ 0.99
PTPN7-209ENST00000477554 SEPT2Q15019 361 aa21.22■□□□□ 0.99
PTPN7-209ENST00000477554 RAB3GAP1Q15042 981 aa21.22■□□□□ 0.99
PTPN7-209ENST00000477554 ZYXQ15942 572 aaKnown RBP21.22■□□□□ 0.99
PTPN7-209ENST00000477554 C12orf60Q5U649 245 aa21.22■□□□□ 0.99
PTPN7-209ENST00000477554 FASTKD5Q7L8L6 764 aaKnown RBP21.22■□□□□ 0.99
PTPN7-209ENST00000477554 PLEKHM2Q8IWE5 1019 aa21.22■□□□□ 0.99
PTPN7-209ENST00000477554 ATP8A2Q9NTI2 1148 aa21.22■□□□□ 0.99
PTPN7-209ENST00000477554 MYH8P13535 1937 aa21.22■□□□□ 0.99
PTPN7-209ENST00000477554 BCRP11274 1271 aa21.21■□□□□ 0.99
PTPN7-209ENST00000477554 AKR1B1P15121 316 aa21.21■□□□□ 0.99
PTPN7-209ENST00000477554 PDE4AP27815 886 aa21.21■□□□□ 0.99
PTPN7-209ENST00000477554 BACE1P56817 501 aa21.21■□□□□ 0.99
PTPN7-209ENST00000477554 ABCB5Q2M3G0 1257 aa21.21■□□□□ 0.99
PTPN7-209ENST00000477554 SH3D19Q5HYK7 790 aa21.21■□□□□ 0.99
PTPN7-209ENST00000477554 ZMYM1Q5SVZ6 1142 aa21.21■□□□□ 0.99
PTPN7-209ENST00000477554 ERO1AQ96HE7 468 aa21.21■□□□□ 0.99
PTPN7-209ENST00000477554 EMILIN3Q9NT22 766 aa21.21■□□□□ 0.99
PTPN7-209ENST00000477554 LACTBP83111 547 aaPredicted RBP21.21■□□□□ 0.99
PTPN7-209ENST00000477554 POTEEQ6S8J3 1075 aa21.21■□□□□ 0.99
PTPN7-209ENST00000477554 EFCC1Q9HA90 598 aa21.21■□□□□ 0.99
PTPN7-209ENST00000477554 A0A1W2PRG0 241 aa21.2■□□□□ 0.98
PTPN7-209ENST00000477554 FBXO46Q6PJ61 603 aaPredicted RBP21.2■□□□□ 0.98
PTPN7-209ENST00000477554 CENPQQ7L2Z9 268 aaPredicted RBP21.2■□□□□ 0.98
PTPN7-209ENST00000477554 PROCA1Q8NCQ7 364 aaPredicted RBP21.2■□□□□ 0.98
PTPN7-209ENST00000477554 TRIM47Q96LD4 638 aa21.2■□□□□ 0.98
PTPN7-209ENST00000477554 PARK7Q99497 189 aaKnown RBP21.2■□□□□ 0.98
PTPN7-209ENST00000477554 ZBTB47Q9UFB7 747 aaPredicted RBP21.2■□□□□ 0.98
PTPN7-209ENST00000477554 MGAMO43451 1857 aa21.19■□□□□ 0.98
PTPN7-209ENST00000477554 CDK8P49336 464 aa21.19■□□□□ 0.98
PTPN7-209ENST00000477554 SOX10P56693 466 aa21.19■□□□□ 0.98
PTPN7-209ENST00000477554 KIAA1755Q5JYT7 1200 aa21.19■□□□□ 0.98
PTPN7-209ENST00000477554 SIAH1Q8IUQ4 282 aa21.19■□□□□ 0.98
PTPN7-209ENST00000477554 FAM227BQ96M60 508 aa21.19■□□□□ 0.98
PTPN7-209ENST00000477554 AS3MTQ9HBK9 375 aa21.19■□□□□ 0.98
PTPN7-209ENST00000477554 PTPN22Q9Y2R2 807 aa21.19■□□□□ 0.98
PTPN7-209ENST00000477554 USP17L10C9JJH3 530 aa21.18■□□□□ 0.98
PTPN7-209ENST00000477554 MPHOSPH10O00566 681 aaKnown RBP21.18■□□□□ 0.98
PTPN7-209ENST00000477554 ZFYP08048 801 aaPredicted RBP21.18■□□□□ 0.98
PTPN7-209ENST00000477554 VPS53Q5VIR6 699 aa21.18■□□□□ 0.98
PTPN7-209ENST00000477554 ANKRD13CQ8N6S4 541 aa21.18■□□□□ 0.98
PTPN7-209ENST00000477554 ASCC2Q9H1I8 757 aaPredicted RBP21.18■□□□□ 0.98
PTPN7-209ENST00000477554 PTCH2Q9Y6C5 1203 aa21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms