RNA–Protein interactions for RNA: ENST00000476597.1

SEC13-214, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-214ENST00000476597 ZBTB21Q9ULJ3 1066 aa13.09□□□□□ -0.31
SEC13-214ENST00000476597 MYPNQ86TC9 1320 aa13.09□□□□□ -0.31
SEC13-214ENST00000476597 USP17L10C9JJH3 530 aa13.08□□□□□ -0.32
SEC13-214ENST00000476597 SMARCA5O60264 1052 aaPredicted RBP13.08□□□□□ -0.32
SEC13-214ENST00000476597 HOXA7P31268 230 aaPredicted RBP13.08□□□□□ -0.32
SEC13-214ENST00000476597 GRK4P32298 578 aa13.08□□□□□ -0.32
SEC13-214ENST00000476597 GCLCP48506 637 aaPredicted RBP13.08□□□□□ -0.32
SEC13-214ENST00000476597 PLCD1P51178 756 aa13.08□□□□□ -0.32
SEC13-214ENST00000476597 PRKCZQ05513 592 aa13.08□□□□□ -0.32
SEC13-214ENST00000476597 ANKRD13CQ8N6S4 541 aa13.08□□□□□ -0.32
SEC13-214ENST00000476597 RAET1EQ8TD07 263 aa13.08□□□□□ -0.32
SEC13-214ENST00000476597 CRNKL1Q9BZJ0 848 aaKnown RBP13.08□□□□□ -0.32
SEC13-214ENST00000476597 ASCC2Q9H1I8 757 aaPredicted RBP13.08□□□□□ -0.32
SEC13-214ENST00000476597 TMOD4Q9NZQ9 345 aa13.08□□□□□ -0.32
SEC13-214ENST00000476597 GABRQQ9UN88 632 aa13.08□□□□□ -0.32
SEC13-214ENST00000476597 KIAA0100Q14667 2235 aaKnown RBP13.08□□□□□ -0.32
SEC13-214ENST00000476597 MYCP01106 439 aaPredicted RBP13.07□□□□□ -0.32
SEC13-214ENST00000476597 GH2P01242 217 aa13.07□□□□□ -0.32
SEC13-214ENST00000476597 ADD2P35612 726 aa13.07□□□□□ -0.32
SEC13-214ENST00000476597 MTMR2Q13614 643 aa13.07□□□□□ -0.32
SEC13-214ENST00000476597 FAM110CQ1W6H9 321 aa13.07□□□□□ -0.32
SEC13-214ENST00000476597 TNPO2O14787 897 aaKnown RBP13.06□□□□□ -0.32
SEC13-214ENST00000476597 POLR3DP05423 398 aaPredicted RBP13.06□□□□□ -0.32
SEC13-214ENST00000476597 FLT3LGP49771 235 aa13.06□□□□□ -0.32
SEC13-214ENST00000476597 GABPAQ06546 454 aa13.06□□□□□ -0.32
SEC13-214ENST00000476597 MTFR1Q15390 333 aa13.06□□□□□ -0.32
SEC13-214ENST00000476597 SLFNL1Q499Z3 407 aa13.06□□□□□ -0.32
SEC13-214ENST00000476597 CERKLQ49MI3 558 aaPredicted RBP13.06□□□□□ -0.32
SEC13-214ENST00000476597 PRPF38BQ5VTL8 546 aaKnown RBP13.06□□□□□ -0.32
SEC13-214ENST00000476597 LCORLQ8N3X6 602 aa13.06□□□□□ -0.32
SEC13-214ENST00000476597 P2RX7Q99572 595 aaKnown RBP13.06□□□□□ -0.32
SEC13-214ENST00000476597 DCP1AQ9NPI6 582 aaPredicted RBP13.06□□□□□ -0.32
SEC13-214ENST00000476597 EMILIN3Q9NT22 766 aa13.06□□□□□ -0.32
SEC13-214ENST00000476597 MCM9Q9NXL9 1143 aa13.06□□□□□ -0.32
SEC13-214ENST00000476597 MAST2Q6P0Q8 1798 aa13.05□□□□□ -0.32
SEC13-214ENST00000476597 SHMT1P34896 483 aa13.05□□□□□ -0.32
SEC13-214ENST00000476597 IRF5Q13568 498 aa13.05□□□□□ -0.32
SEC13-214ENST00000476597 UBE3CQ15386 1083 aa13.05□□□□□ -0.32
SEC13-214ENST00000476597 ABCB5Q2M3G0 1257 aa13.05□□□□□ -0.32
SEC13-214ENST00000476597 USP17L2Q6R6M4 530 aa13.05□□□□□ -0.32
SEC13-214ENST00000476597 SLAIN1Q8ND83 568 aa13.05□□□□□ -0.32
SEC13-214ENST00000476597 SDR42E1Q8WUS8 393 aa13.05□□□□□ -0.32
SEC13-214ENST00000476597 COA7Q96BR5 231 aa13.05□□□□□ -0.32
SEC13-214ENST00000476597 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.05□□□□□ -0.325e-10■□□□□ 8.6
SEC13-214ENST00000476597 ARMT1Q9H993 441 aa13.05□□□□□ -0.32
SEC13-214ENST00000476597 CABP5Q9NP86 173 aa13.05□□□□□ -0.32
SEC13-214ENST00000476597 MORF4L1Q9UBU8 362 aa13.05□□□□□ -0.32
SEC13-214ENST00000476597 DOCK1Q14185 1865 aa13.05□□□□□ -0.32
SEC13-214ENST00000476597 PRKAB2O43741 272 aa13.04□□□□□ -0.32
SEC13-214ENST00000476597 ADCY3O60266 1144 aa13.04□□□□□ -0.32
SEC13-214ENST00000476597 CHGBP05060 677 aa13.04□□□□□ -0.32
SEC13-214ENST00000476597 GUCY1A2P33402 732 aa13.04□□□□□ -0.32
SEC13-214ENST00000476597 UBXN2AP68543 259 aa13.04□□□□□ -0.32
SEC13-214ENST00000476597 IRX3P78415 501 aaPredicted RBP13.04□□□□□ -0.32
SEC13-214ENST00000476597 EVX2Q03828 476 aa13.04□□□□□ -0.32
SEC13-214ENST00000476597 ZSCAN25Q6NSZ9 544 aa13.04□□□□□ -0.32
SEC13-214ENST00000476597 PXYLP1Q8TE99 480 aa13.04□□□□□ -0.32
SEC13-214ENST00000476597 ATP8A2Q9NTI2 1148 aa13.04□□□□□ -0.32
SEC13-214ENST00000476597 ECHDC1Q9NTX5 307 aa13.04□□□□□ -0.32
SEC13-214ENST00000476597 PCDHB15Q9Y5E8 787 aa13.04□□□□□ -0.32
SEC13-214ENST00000476597 PHIPQ8WWQ0 1821 aa13.04□□□□□ -0.32
SEC13-214ENST00000476597 MBD4O95243 580 aa13.03□□□□□ -0.32
SEC13-214ENST00000476597 CCL5P13501 91 aa13.03□□□□□ -0.32
SEC13-214ENST00000476597 HERVK_113P62684 666 aa13.03□□□□□ -0.32
SEC13-214ENST00000476597 RAB3GAP1Q15042 981 aa13.03□□□□□ -0.32
SEC13-214ENST00000476597 ACER1Q8TDN7 264 aa13.03□□□□□ -0.32
SEC13-214ENST00000476597 C12orf42Q96LP6 360 aa13.03□□□□□ -0.32
SEC13-214ENST00000476597 KIAA1683Q9H0B3 1180 aa13.03□□□□□ -0.32
SEC13-214ENST00000476597 RBPJLQ9UBG7 517 aa13.03□□□□□ -0.32
SEC13-214ENST00000476597 BIN2Q9UBW5 565 aaPredicted RBP13.03□□□□□ -0.32
SEC13-214ENST00000476597 GJD2Q9UKL4 321 aa13.03□□□□□ -0.32
SEC13-214ENST00000476597 TAOK2Q9UL54 1235 aa13.03□□□□□ -0.32
SEC13-214ENST00000476597 SIPA1L1O43166 1804 aa13.03□□□□□ -0.32
SEC13-214ENST00000476597 MYO5AQ9Y4I1 1855 aaKnown RBP13.03□□□□□ -0.32
SEC13-214ENST00000476597 GJB1P08034 283 aa13.02□□□□□ -0.33
SEC13-214ENST00000476597 CYP2D6P10635 497 aa13.02□□□□□ -0.33
SEC13-214ENST00000476597 USP14P54578 494 aa13.02□□□□□ -0.33
SEC13-214ENST00000476597 RRP1P56182 461 aaKnown RBP13.02□□□□□ -0.33
SEC13-214ENST00000476597 Q3C1V9 767 aa13.02□□□□□ -0.33
SEC13-214ENST00000476597 POTEEQ6S8J3 1075 aa13.02□□□□□ -0.33
SEC13-214ENST00000476597 GPRC5AQ8NFJ5 357 aa13.02□□□□□ -0.33
SEC13-214ENST00000476597 NKX2-3Q8TAU0 364 aa13.02□□□□□ -0.33
SEC13-214ENST00000476597 PUS7LQ9H0K6 701 aaKnown RBP13.02□□□□□ -0.33
SEC13-214ENST00000476597 RNF208Q9H0X6 261 aa13.02□□□□□ -0.33
SEC13-214ENST00000476597 TXNRD2Q9NNW7 524 aa13.02□□□□□ -0.33
SEC13-214ENST00000476597 SWAP70Q9UH65 585 aa13.02□□□□□ -0.33
SEC13-214ENST00000476597 ZSWIM8A7E2V4 1837 aa13.02□□□□□ -0.33
SEC13-214ENST00000476597 USP17L15C9J2P7 530 aa13.01□□□□□ -0.33
SEC13-214ENST00000476597 USP17L13C9JLJ4 530 aa13.01□□□□□ -0.33
SEC13-214ENST00000476597 USP17L11C9JVI0 530 aa13.01□□□□□ -0.33
SEC13-214ENST00000476597 USP17L18D6R9N7 530 aa13.01□□□□□ -0.33
SEC13-214ENST00000476597 USP17L22D6RA61 530 aa13.01□□□□□ -0.33
SEC13-214ENST00000476597 USP17L17D6RBQ6 530 aa13.01□□□□□ -0.33
SEC13-214ENST00000476597 USP17L19D6RCP7 530 aa13.01□□□□□ -0.33
SEC13-214ENST00000476597 USP17L20D6RJB6 530 aa13.01□□□□□ -0.33
SEC13-214ENST00000476597 PEX10O60683 326 aa13.01□□□□□ -0.33
SEC13-214ENST00000476597 ELNP15502 786 aa13.01□□□□□ -0.33
SEC13-214ENST00000476597 GJA8P48165 433 aa13.01□□□□□ -0.33
SEC13-214ENST00000476597 USP17L24Q0WX57 530 aa13.01□□□□□ -0.33
SEC13-214ENST00000476597 SEPT2Q15019 361 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms