RNA–Protein interactions for RNA: ENST00000474597.5

SSR1-204, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 1,808 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-204ENST00000474597 WDHD1O75717 1129 aaPredicted RBP23.08■■□□□ 1.28
SSR1-204ENST00000474597 CALM1P0DP23 149 aa23.08■■□□□ 1.28
SSR1-204ENST00000474597 CALM2P0DP24 149 aa23.08■■□□□ 1.28
SSR1-204ENST00000474597 CALM3P0DP25 149 aa23.08■■□□□ 1.28
SSR1-204ENST00000474597 DNM1Q05193 864 aaKnown RBP23.08■■□□□ 1.28
SSR1-204ENST00000474597 SSRP1Q08945 709 aaKnown RBP23.08■■□□□ 1.28
SSR1-204ENST00000474597 FANCBQ8NB91 859 aa23.08■■□□□ 1.28
SSR1-204ENST00000474597 CNPY2Q9Y2B0 182 aa23.08■■□□□ 1.28
SSR1-204ENST00000474597 CDK8P49336 464 aa23.07■■□□□ 1.28
SSR1-204ENST00000474597 SLC44A5Q8NCS7 719 aa23.07■■□□□ 1.28
SSR1-204ENST00000474597 SGIP1Q9BQI5 828 aa23.07■■□□□ 1.28
SSR1-204ENST00000474597 GDPD2Q9HCC8 539 aa23.07■■□□□ 1.28
SSR1-204ENST00000474597 FAM217BQ9NTX9 383 aaPredicted RBP23.07■■□□□ 1.28
SSR1-204ENST00000474597 NMT2O60551 498 aa23.06■■□□□ 1.28
SSR1-204ENST00000474597 KRT85P78386 507 aa23.06■■□□□ 1.28
SSR1-204ENST00000474597 GSE1Q14687 1217 aa23.06■■□□□ 1.28
SSR1-204ENST00000474597 KLHL40Q2TBA0 621 aa23.06■■□□□ 1.28
SSR1-204ENST00000474597 PHKBQ93100 1093 aa23.06■■□□□ 1.28
SSR1-204ENST00000474597 DDX4Q9NQI0 724 aaKnown RBP23.06■■□□□ 1.28
SSR1-204ENST00000474597 RAD17O75943 681 aa23.05■■□□□ 1.28
SSR1-204ENST00000474597 DDAH1O94760 285 aa23.05■■□□□ 1.28
SSR1-204ENST00000474597 IFNAR1P17181 557 aa23.05■■□□□ 1.28
SSR1-204ENST00000474597 GUCY1B3Q02153 619 aa23.05■■□□□ 1.28
SSR1-204ENST00000474597 NTRK3Q16288 839 aa23.05■■□□□ 1.28
SSR1-204ENST00000474597 RSBN1LQ6PCB5 846 aaPredicted RBP23.05■■□□□ 1.28
SSR1-204ENST00000474597 USP48Q86UV5 1035 aa23.05■■□□□ 1.28
SSR1-204ENST00000474597 TRIM22Q8IYM9 498 aa23.05■■□□□ 1.28
SSR1-204ENST00000474597 OSBPL5Q9H0X9 879 aaPredicted RBP23.05■■□□□ 1.28
SSR1-204ENST00000474597 GZF1Q9H116 711 aaPredicted RBP23.05■■□□□ 1.28
SSR1-204ENST00000474597 TAOK3Q9H2K8 898 aa23.05■■□□□ 1.28
SSR1-204ENST00000474597 FER1L6Q2WGJ9 1857 aa23.05■■□□□ 1.28
SSR1-204ENST00000474597 MYH8P13535 1937 aa23.05■■□□□ 1.28
SSR1-204ENST00000474597 FIBPO43427 364 aa23.05■■□□□ 1.28
SSR1-204ENST00000474597 HLA-DOAP06340 250 aa23.05■■□□□ 1.28
SSR1-204ENST00000474597 RESTQ13127 1097 aa23.05■■□□□ 1.28
SSR1-204ENST00000474597 ALG1Q9BT22 464 aa23.05■■□□□ 1.28
SSR1-204ENST00000474597 SLC26A6Q9BXS9 759 aa23.05■■□□□ 1.28
SSR1-204ENST00000474597 RBM28Q9NW13 759 aaKnown RBP23.05■■□□□ 1.28
SSR1-204ENST00000474597 ZNRF3Q9ULT6 936 aa23.05■■□□□ 1.28
SSR1-204ENST00000474597 STK36Q9NRP7 1315 aa23.05■■□□□ 1.28
SSR1-204ENST00000474597 PSMD14O00487 310 aa23.04■■□□□ 1.28
SSR1-204ENST00000474597 RASA1P20936 1047 aa23.04■■□□□ 1.28
SSR1-204ENST00000474597 DGKHQ86XP1 1220 aa23.04■■□□□ 1.28
SSR1-204ENST00000474597 WASF1Q92558 559 aa23.04■■□□□ 1.28
SSR1-204ENST00000474597 KAT14Q9H8E8 782 aa23.04■■□□□ 1.28
SSR1-204ENST00000474597 HDAC9Q9UKV0 1011 aa23.04■■□□□ 1.28
SSR1-204ENST00000474597 BCS1LQ9Y276 419 aa23.04■■□□□ 1.28
SSR1-204ENST00000474597 FMNL1O95466 1100 aaPredicted RBP23.03■■□□□ 1.28
SSR1-204ENST00000474597 VIL1P09327 827 aaKnown RBP23.03■■□□□ 1.28
SSR1-204ENST00000474597 TMEM87AQ8NBN3 555 aa23.03■■□□□ 1.28
SSR1-204ENST00000474597 TCP11L1Q9NUJ3 509 aa23.03■■□□□ 1.28
SSR1-204ENST00000474597 MYH15Q9Y2K3 1946 aa23.03■■□□□ 1.28
SSR1-204ENST00000474597 MBD3O95983 291 aa23.03■■□□□ 1.28
SSR1-204ENST00000474597 CFAP100Q494V2 611 aa23.03■■□□□ 1.28
SSR1-204ENST00000474597 CTCFLQ8NI51 663 aaPredicted RBP23.03■■□□□ 1.28
SSR1-204ENST00000474597 MYH6P13533 1939 aa23.03■■□□□ 1.28
SSR1-204ENST00000474597 PTGER2P43116 358 aa23.02■■□□□ 1.28
SSR1-204ENST00000474597 TRIM29Q14134 588 aa23.02■■□□□ 1.28
SSR1-204ENST00000474597 RGS22Q8NE09 1264 aa23.02■■□□□ 1.28
SSR1-204ENST00000474597 FBXO18Q8NFZ0 1043 aa23.02■■□□□ 1.28
SSR1-204ENST00000474597 JDP2Q8WYK2 163 aa23.02■■□□□ 1.28
SSR1-204ENST00000474597 PCDHAC2Q9Y5I4 1007 aa23.02■■□□□ 1.28
SSR1-204ENST00000474597 COL4A5P29400 1685 aa23.02■■□□□ 1.28
SSR1-204ENST00000474597 TROAPQ12815 778 aa23.01■■□□□ 1.27
SSR1-204ENST00000474597 FAM173BQ6P4H8 233 aa23.01■■□□□ 1.27
SSR1-204ENST00000474597 OGFOD1Q8N543 542 aa23.01■■□□□ 1.27
SSR1-204ENST00000474597 IL17RBQ9NRM6 502 aa23.01■■□□□ 1.27
SSR1-204ENST00000474597 SWAP70Q9UH65 585 aa23.01■■□□□ 1.27
SSR1-204ENST00000474597 AKAP17AQ02040 695 aaKnown RBP23.01■■□□□ 1.27
SSR1-204ENST00000474597 NFIAQ12857 509 aa23.01■■□□□ 1.27
SSR1-204ENST00000474597 CCDC82Q8N4S0 544 aa23.01■■□□□ 1.27
SSR1-204ENST00000474597 IDI2Q9BXS1 227 aa23.01■■□□□ 1.27
SSR1-204ENST00000474597 SERPINB13Q9UIV8 391 aa23.01■■□□□ 1.27
SSR1-204ENST00000474597 TAOK2Q9UL54 1235 aa23.01■■□□□ 1.27
SSR1-204ENST00000474597 CACNB3P54284 484 aa23■■□□□ 1.27
SSR1-204ENST00000474597 OTUD7BQ6GQQ9 843 aa23■■□□□ 1.27
SSR1-204ENST00000474597 RCSD1Q6JBY9 416 aa23■■□□□ 1.27
SSR1-204ENST00000474597 CRACR2BQ8N4Y2 399 aaPredicted RBP23■■□□□ 1.27
SSR1-204ENST00000474597 NEDD1Q8NHV4 660 aa23■■□□□ 1.27
SSR1-204ENST00000474597 ANKS1AQ92625 1134 aa23■■□□□ 1.27
SSR1-204ENST00000474597 SCAND2PQ9GZW5 306 aaPredicted RBP23■■□□□ 1.27
SSR1-204ENST00000474597 TCP10Q12799 353 aa22.99■■□□□ 1.27
SSR1-204ENST00000474597 DHX36Q9H2U1 1008 aaKnown RBP22.99■■□□□ 1.27
SSR1-204ENST00000474597 CFAP45Q9UL16 551 aa22.99■■□□□ 1.27
SSR1-204ENST00000474597 STX8Q9UNK0 236 aa22.99■■□□□ 1.27
SSR1-204ENST00000474597 DEXIO95424 95 aa22.98■■□□□ 1.27
SSR1-204ENST00000474597 KIF5BP33176 963 aa22.98■■□□□ 1.27
SSR1-204ENST00000474597 GABPAQ06546 454 aa22.98■■□□□ 1.27
SSR1-204ENST00000474597 ZSCAN29Q8IWY8 852 aaPredicted RBP22.98■■□□□ 1.27
SSR1-204ENST00000474597 CMTR1Q8N1G2 835 aaKnown RBP22.98■■□□□ 1.27
SSR1-204ENST00000474597 PNMA1Q8ND90 353 aa22.98■■□□□ 1.27
SSR1-204ENST00000474597 GPT2Q8TD30 523 aa22.98■■□□□ 1.27
SSR1-204ENST00000474597 AIFM3Q96NN9 605 aa22.98■■□□□ 1.27
SSR1-204ENST00000474597 TDRD3Q9H7E2 651 aaKnown RBP22.98■■□□□ 1.27
SSR1-204ENST00000474597 NPM3O75607 178 aaKnown RBP22.98■■□□□ 1.27
SSR1-204ENST00000474597 NBPF11Q86T75 865 aa22.98■■□□□ 1.27
SSR1-204ENST00000474597 ZNF396Q96N95 335 aaPredicted RBP22.98■■□□□ 1.27
SSR1-204ENST00000474597 RNF26Q9BY78 433 aaPredicted RBP22.98■■□□□ 1.27
SSR1-204ENST00000474597 TMOD2Q9NZR1 351 aa22.98■■□□□ 1.27
SSR1-204ENST00000474597 TFIP11Q9UBB9 837 aaKnown RBP22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms