RNA–Protein interactions for RNA: ENST00000474272.1

TMEM50B-208, Transcript of transmembrane protein 50B, humanhuman

TSL 3

Gene TMEM50B, Length 518 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-208ENST00000474272 LMCD1Q9NZU5 365 aa6.77□□□□□ -1.33
TMEM50B-208ENST00000474272 MFSD4AQ8N468 514 aa6.76□□□□□ -1.33
TMEM50B-208ENST00000474272 KIRREL1Q96J84 757 aa6.76□□□□□ -1.33
TMEM50B-208ENST00000474272 FAM53CQ9NYF3 392 aa6.76□□□□□ -1.33
TMEM50B-208ENST00000474272 ZSWIM5Q9P217 1185 aa6.76□□□□□ -1.33
TMEM50B-208ENST00000474272 TTF2Q9UNY4 1162 aaKnown RBP6.76□□□□□ -1.33
TMEM50B-208ENST00000474272 SPG7Q9UQ90 795 aa6.76□□□□□ -1.33
TMEM50B-208ENST00000474272 PCDHB5Q9Y5E4 795 aa6.76□□□□□ -1.33
TMEM50B-208ENST00000474272 ST14Q9Y5Y6 855 aa6.76□□□□□ -1.33
TMEM50B-208ENST00000474272 IVNS1ABPQ9Y6Y0 642 aa6.76□□□□□ -1.33
TMEM50B-208ENST00000474272 WASH4PA8MWX3 477 aa6.75□□□□□ -1.33
TMEM50B-208ENST00000474272 P4HBP07237 508 aaKnown RBP6.75□□□□□ -1.33
TMEM50B-208ENST00000474272 GLI1P08151 1106 aa6.75□□□□□ -1.33
TMEM50B-208ENST00000474272 GRK4P32298 578 aa6.75□□□□□ -1.33
TMEM50B-208ENST00000474272 TMEM67Q5HYA8 995 aa6.75□□□□□ -1.33
TMEM50B-208ENST00000474272 PRAMEF13Q5VWM6 474 aa6.75□□□□□ -1.33
TMEM50B-208ENST00000474272 TTBK2Q6IQ55 1244 aa6.75□□□□□ -1.33
TMEM50B-208ENST00000474272 LETMD1Q6P1Q0 360 aa6.75□□□□□ -1.33
TMEM50B-208ENST00000474272 SYDE1Q6ZW31 735 aaPredicted RBP6.75□□□□□ -1.33
TMEM50B-208ENST00000474272 CDH24Q86UP0 819 aa6.75□□□□□ -1.33
TMEM50B-208ENST00000474272 CILP2Q8IUL8 1156 aa6.75□□□□□ -1.33
TMEM50B-208ENST00000474272 HOMEZQ8IX15 550 aa6.75□□□□□ -1.33
TMEM50B-208ENST00000474272 UBE2FQ969M7 185 aa6.75□□□□□ -1.33
TMEM50B-208ENST00000474272 ASB16Q96NS5 453 aa6.75□□□□□ -1.33
TMEM50B-208ENST00000474272 DIRC2Q96SL1 478 aa6.75□□□□□ -1.33
TMEM50B-208ENST00000474272 DPH2Q9BQC3 489 aaPredicted RBP6.75□□□□□ -1.33
TMEM50B-208ENST00000474272 KRTAP4-9Q9BYQ8 210 aa6.75□□□□□ -1.33
TMEM50B-208ENST00000474272 RNF19AQ9NV58 838 aa6.75□□□□□ -1.33
TMEM50B-208ENST00000474272 FAM8A1Q9UBU6 413 aa6.75□□□□□ -1.33
TMEM50B-208ENST00000474272 CAPN6Q9Y6Q1 641 aa6.75□□□□□ -1.33
TMEM50B-208ENST00000474272 GIPC1O14908 333 aa6.74□□□□□ -1.33
TMEM50B-208ENST00000474272 ZNF865P0CJ78 1059 aaPredicted RBP6.74□□□□□ -1.33
TMEM50B-208ENST00000474272 CFPP27918 469 aa6.74□□□□□ -1.33
TMEM50B-208ENST00000474272 RAP1GAPP47736 663 aa6.74□□□□□ -1.33
TMEM50B-208ENST00000474272 ATP2B2Q01814 1243 aa6.74□□□□□ -1.33
TMEM50B-208ENST00000474272 SEPT6Q14141 434 aa6.74□□□□□ -1.33
TMEM50B-208ENST00000474272 MAP3K11Q16584 847 aa6.74□□□□□ -1.33
TMEM50B-208ENST00000474272 NPAS4Q8IUM7 802 aa6.74□□□□□ -1.33
TMEM50B-208ENST00000474272 HID1Q8IV36 788 aa6.74□□□□□ -1.33
TMEM50B-208ENST00000474272 MFSD2AQ8NA29 543 aa6.73□□□□□ -1.33
TMEM50B-208ENST00000474272 ANKRD24Q8TF21 1146 aa6.73□□□□□ -1.33
TMEM50B-208ENST00000474272 CST3P01034 146 aaPredicted RBP6.72□□□□□ -1.33
TMEM50B-208ENST00000474272 LDHBP07195 334 aaKnown RBP6.72□□□□□ -1.33
TMEM50B-208ENST00000474272 GDNFP39905 211 aa6.72□□□□□ -1.33
TMEM50B-208ENST00000474272 ERVFC1P60507 584 aa6.72□□□□□ -1.33
TMEM50B-208ENST00000474272 TNK2Q07912 1038 aa6.72□□□□□ -1.33
TMEM50B-208ENST00000474272 SCARA3Q6AZY7 606 aa6.72□□□□□ -1.33
TMEM50B-208ENST00000474272 SV2BQ7L1I2 683 aa6.72□□□□□ -1.33
TMEM50B-208ENST00000474272 SLAMF8Q9P0V8 285 aa6.72□□□□□ -1.33
TMEM50B-208ENST00000474272 SNCAIPQ9Y6H5 919 aa6.72□□□□□ -1.33
TMEM50B-208ENST00000474272 DNAJC25-GNG10A0A024R161 153 aa6.71□□□□□ -1.34
TMEM50B-208ENST00000474272 GFRA2O00451 464 aa6.71□□□□□ -1.34
TMEM50B-208ENST00000474272 C1QTNF9P0C862 333 aa6.71□□□□□ -1.34
TMEM50B-208ENST00000474272 CCDC85BQ15834 202 aaPredicted RBP6.71□□□□□ -1.34
TMEM50B-208ENST00000474272 RALGPS1Q5JS13 557 aa6.71□□□□□ -1.34
TMEM50B-208ENST00000474272 C22orf34Q6ZV56 151 aa6.71□□□□□ -1.34
TMEM50B-208ENST00000474272 TTC6Q86TZ1 520 aa6.71□□□□□ -1.34
TMEM50B-208ENST00000474272 ALPK1Q96QP1 1244 aa6.71□□□□□ -1.34
TMEM50B-208ENST00000474272 NSUN3Q9H649 340 aaKnown RBP6.71□□□□□ -1.34
TMEM50B-208ENST00000474272 KRT1P04264 644 aa6.7□□□□□ -1.34
TMEM50B-208ENST00000474272 CAP2P40123 477 aa6.7□□□□□ -1.34
TMEM50B-208ENST00000474272 LCNL1Q6ZST4 164 aa6.7□□□□□ -1.34
TMEM50B-208ENST00000474272 C1QL4Q86Z23 238 aa6.7□□□□□ -1.34
TMEM50B-208ENST00000474272 TJP2Q9UDY2 1190 aa6.7□□□□□ -1.34
TMEM50B-208ENST00000474272 TSPAN15O95858 294 aa6.69□□□□□ -1.34
TMEM50B-208ENST00000474272 ESR1P03372 595 aa6.69□□□□□ -1.34
TMEM50B-208ENST00000474272 EIF4BP23588 611 aaKnown RBP6.69□□□□□ -1.34
TMEM50B-208ENST00000474272 HK2P52789 917 aa6.69□□□□□ -1.34
TMEM50B-208ENST00000474272 LRRC56Q8IYG6 542 aaPredicted RBP6.69□□□□□ -1.34
TMEM50B-208ENST00000474272 KRTAP9-7A8MTY7 169 aa6.68□□□□□ -1.34
TMEM50B-208ENST00000474272 PGRP06401 933 aa6.68□□□□□ -1.34
TMEM50B-208ENST00000474272 LMNB1P20700 586 aa6.68□□□□□ -1.34
TMEM50B-208ENST00000474272 TRHRP34981 398 aaPredicted RBP6.68□□□□□ -1.34
TMEM50B-208ENST00000474272 ANKLE2Q86XL3 938 aa6.68□□□□□ -1.34
TMEM50B-208ENST00000474272 BHLHE22Q8NFJ8 381 aaPredicted RBP6.68□□□□□ -1.34
TMEM50B-208ENST00000474272 JARID2Q92833 1246 aaPredicted RBP6.68□□□□□ -1.34
TMEM50B-208ENST00000474272 TOX2Q96NM4 488 aa6.68□□□□□ -1.34
TMEM50B-208ENST00000474272 ADAMTS10Q9H324 1103 aa6.68□□□□□ -1.34
TMEM50B-208ENST00000474272 GNA15P30679 374 aa6.67□□□□□ -1.34
TMEM50B-208ENST00000474272 MEI1Q5TIA1 1274 aa6.67□□□□□ -1.34
TMEM50B-208ENST00000474272 THAP5Q7Z6K1 395 aa6.67□□□□□ -1.34
TMEM50B-208ENST00000474272 CREG2Q8IUH2 290 aa6.67□□□□□ -1.34
TMEM50B-208ENST00000474272 ABHD4Q8TB40 342 aa6.67□□□□□ -1.34
TMEM50B-208ENST00000474272 TMEM87BQ96K49 555 aa6.67□□□□□ -1.34
TMEM50B-208ENST00000474272 Q96M66 194 aa6.67□□□□□ -1.34
TMEM50B-208ENST00000474272 PPP1R16BQ96T49 567 aa6.67□□□□□ -1.34
TMEM50B-208ENST00000474272 TLR6Q9Y2C9 796 aa6.67□□□□□ -1.34
TMEM50B-208ENST00000474272 F6X3S4 739 aa6.66□□□□□ -1.34
TMEM50B-208ENST00000474272 TFE3P19532 575 aaPredicted RBP6.66□□□□□ -1.34
TMEM50B-208ENST00000474272 CYP7A1P22680 504 aa6.66□□□□□ -1.34
TMEM50B-208ENST00000474272 ZNF746Q6NUN9 644 aaPredicted RBP6.66□□□□□ -1.34
TMEM50B-208ENST00000474272 AGMOQ6ZNB7 445 aa6.66□□□□□ -1.34
TMEM50B-208ENST00000474272 FBXO15Q8NCQ5 510 aaPredicted RBP6.66□□□□□ -1.34
TMEM50B-208ENST00000474272 DUSP9Q99956 384 aaKnown RBP6.66□□□□□ -1.34
TMEM50B-208ENST00000474272 DCP1AQ9NPI6 582 aaPredicted RBP6.66□□□□□ -1.34
TMEM50B-208ENST00000474272 CORINQ9Y5Q5 1042 aa6.66□□□□□ -1.34
TMEM50B-208ENST00000474272 UPK3BL1B0FP48 263 aa6.65□□□□□ -1.34
TMEM50B-208ENST00000474272 UPK3BL2E5RIL1 263 aa6.65□□□□□ -1.34
TMEM50B-208ENST00000474272 NPIPB6E9PJ23 425 aa6.65□□□□□ -1.34
TMEM50B-208ENST00000474272 NFIBO00712 420 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms