RNA–Protein interactions for RNA: ENST00000473480.5

A1CF-209, Transcript of APOBEC1 complementation factor, humanhuman

TSL 3

Gene A1CF, Length 813 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-209ENST00000473480 SETDB2Q96T68 719 aa10.6□□□□□ -0.71
A1CF-209ENST00000473480 NRSN2Q9GZP1 204 aa10.6□□□□□ -0.71
A1CF-209ENST00000473480 GZF1Q9H116 711 aaPredicted RBP10.6□□□□□ -0.71
A1CF-209ENST00000473480 ADGRB3O60242 1522 aa10.59□□□□□ -0.71
A1CF-209ENST00000473480 EIF2AK4Q9P2K8 1649 aaKnown RBP10.59□□□□□ -0.71
A1CF-209ENST00000473480 GIPC1O14908 333 aa10.59□□□□□ -0.71
A1CF-209ENST00000473480 LDHBP07195 334 aaKnown RBP10.59□□□□□ -0.71
A1CF-209ENST00000473480 NUTM2GQ5VZR2 741 aa10.59□□□□□ -0.71
A1CF-209ENST00000473480 PRR23CQ6ZRP0 262 aa10.59□□□□□ -0.71
A1CF-209ENST00000473480 TMPRSS13Q9BYE2 586 aa10.59□□□□□ -0.71
A1CF-209ENST00000473480 SPG7Q9UQ90 795 aa10.59□□□□□ -0.71
A1CF-209ENST00000473480 TNS1Q9HBL0 1735 aaKnown RBP10.58□□□□□ -0.72
A1CF-209ENST00000473480 ADGRB2O60241 1585 aa10.58□□□□□ -0.72
A1CF-209ENST00000473480 SART1O43290 800 aaKnown RBP10.58□□□□□ -0.72
A1CF-209ENST00000473480 MAOBP27338 520 aa10.58□□□□□ -0.72
A1CF-209ENST00000473480 FGD1P98174 961 aa10.58□□□□□ -0.72
A1CF-209ENST00000473480 POU4F3Q15319 338 aa10.58□□□□□ -0.72
A1CF-209ENST00000473480 EXOSC6Q5RKV6 272 aaKnown RBP10.58□□□□□ -0.72
A1CF-209ENST00000473480 HP1BP3Q5SSJ5 553 aaPredicted RBP10.58□□□□□ -0.72
A1CF-209ENST00000473480 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.58□□□□□ -0.72
A1CF-209ENST00000473480 FAM46AQ96IP4 442 aaKnown RBP10.58□□□□□ -0.72
A1CF-209ENST00000473480 SYT17Q9BSW7 474 aa10.58□□□□□ -0.72
A1CF-209ENST00000473480 CYP4F12Q9HCS2 524 aa10.58□□□□□ -0.72
A1CF-209ENST00000473480 SLC52A1Q9NWF4 448 aa10.58□□□□□ -0.72
A1CF-209ENST00000473480 TRPM2O94759 1503 aa10.58□□□□□ -0.72
A1CF-209ENST00000473480 EHBP1L1Q8N3D4 1523 aa10.58□□□□□ -0.72
A1CF-209ENST00000473480 ZFYVE9O95405 1425 aa10.58□□□□□ -0.72
A1CF-209ENST00000473480 C1orf167Q5SNV9 1468 aa10.57□□□□□ -0.72
A1CF-209ENST00000473480 AP3B2Q13367 1082 aa10.57□□□□□ -0.72
A1CF-209ENST00000473480 SMG8Q8ND04 991 aaKnown RBP10.57□□□□□ -0.72
A1CF-209ENST00000473480 UTP4Q969X6 686 aaKnown RBP10.57□□□□□ -0.72
A1CF-209ENST00000473480 CORO1BQ9BR76 489 aa10.57□□□□□ -0.72
A1CF-209ENST00000473480 TRIM56Q9BRZ2 755 aaKnown RBP10.57□□□□□ -0.72
A1CF-209ENST00000473480 SUGCTQ9HAC7 445 aa10.57□□□□□ -0.72
A1CF-209ENST00000473480 RIMS2Q9UQ26 1411 aa10.57□□□□□ -0.72
A1CF-209ENST00000473480 FYCO1Q9BQS8 1478 aa10.56□□□□□ -0.72
A1CF-209ENST00000473480 DHX15O43143 795 aaKnown RBP10.56□□□□□ -0.72
A1CF-209ENST00000473480 DLGAP3O95886 979 aa10.56□□□□□ -0.72
A1CF-209ENST00000473480 GSTT1P30711 240 aa10.56□□□□□ -0.72
A1CF-209ENST00000473480 FAAP100Q0VG06 881 aa10.56□□□□□ -0.72
A1CF-209ENST00000473480 DNAJC14Q6Y2X3 702 aaPredicted RBP10.56□□□□□ -0.72
A1CF-209ENST00000473480 HOMEZQ8IX15 550 aa10.56□□□□□ -0.72
A1CF-209ENST00000473480 FRMD6Q96NE9 622 aa10.56□□□□□ -0.72
A1CF-209ENST00000473480 ORAI2Q96SN7 254 aa10.56□□□□□ -0.72
A1CF-209ENST00000473480 AKAP2Q9Y2D5 859 aa10.56□□□□□ -0.72
A1CF-209ENST00000473480 ADAMTS13Q76LX8 1427 aa10.56□□□□□ -0.72
A1CF-209ENST00000473480 TRIM37O94972 964 aa10.55□□□□□ -0.72
A1CF-209ENST00000473480 ITGB7P26010 798 aa10.55□□□□□ -0.72
A1CF-209ENST00000473480 PREPP48147 710 aa10.55□□□□□ -0.72
A1CF-209ENST00000473480 PPP2R3AQ06190 1150 aa10.55□□□□□ -0.72
A1CF-209ENST00000473480 CCDC27Q2M243 656 aa10.55□□□□□ -0.72
A1CF-209ENST00000473480 EAPPQ56P03 285 aaPredicted RBP10.55□□□□□ -0.72
A1CF-209ENST00000473480 ARMC10Q8N2F6 343 aa10.55□□□□□ -0.72
A1CF-209ENST00000473480 MYRFLQ96LU7 910 aa10.55□□□□□ -0.72
A1CF-209ENST00000473480 OSBPL7Q9BZF2 842 aa10.55□□□□□ -0.72
A1CF-209ENST00000473480 TMEM39AQ9NV64 488 aa10.55□□□□□ -0.72
A1CF-209ENST00000473480 GPN3Q9UHW5 284 aaPredicted RBP10.55□□□□□ -0.72
A1CF-209ENST00000473480 ADGRL3Q9HAR2 1447 aa10.55□□□□□ -0.72
A1CF-209ENST00000473480 NRKQ7Z2Y5 1582 aa10.55□□□□□ -0.72
A1CF-209ENST00000473480 PRPF40AO75400 957 aaKnown RBP10.54□□□□□ -0.72
A1CF-209ENST00000473480 ZNF157P51786 506 aaPredicted RBP10.54□□□□□ -0.72
A1CF-209ENST00000473480 GPR162Q16538 588 aa10.54□□□□□ -0.72
A1CF-209ENST00000473480 PRSS36Q5K4E3 855 aa10.54□□□□□ -0.72
A1CF-209ENST00000473480 C12orf50Q8NA57 414 aaPredicted RBP10.54□□□□□ -0.72
A1CF-209ENST00000473480 C3orf58Q8NDZ4 430 aa10.54□□□□□ -0.72
A1CF-209ENST00000473480 PTPRUQ92729 1446 aa10.54□□□□□ -0.72
A1CF-209ENST00000473480 NUP188Q5SRE5 1749 aa10.53□□□□□ -0.72
A1CF-209ENST00000473480 NOS1P29475 1434 aa10.53□□□□□ -0.72
A1CF-209ENST00000473480 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.53□□□□□ -0.72
A1CF-209ENST00000473480 C12orf49Q9H741 205 aa10.53□□□□□ -0.72
A1CF-209ENST00000473480 HIF3AQ9Y2N7 669 aa10.53□□□□□ -0.72
A1CF-209ENST00000473480 RAXQ9Y2V3 346 aa10.53□□□□□ -0.72
A1CF-209ENST00000473480 RREB1Q92766 1687 aa10.53□□□□□ -0.72
A1CF-209ENST00000473480 GAS2O43903 313 aaKnown RBP10.52□□□□□ -0.73
A1CF-209ENST00000473480 TIAF1O95411 115 aa10.52□□□□□ -0.73
A1CF-209ENST00000473480 FAM196AQ6ZSG2 479 aa10.52□□□□□ -0.73
A1CF-209ENST00000473480 NPAS4Q8IUM7 802 aa10.52□□□□□ -0.73
A1CF-209ENST00000473480 STOML1Q9UBI4 398 aa10.52□□□□□ -0.73
A1CF-209ENST00000473480 FAM8A1Q9UBU6 413 aa10.52□□□□□ -0.73
A1CF-209ENST00000473480 PPM1HQ9ULR3 514 aa10.52□□□□□ -0.73
A1CF-209ENST00000473480 SHANK3Q9BYB0 1731 aa10.52□□□□□ -0.73
A1CF-209ENST00000473480 NPHP3Q7Z494 1330 aa10.52□□□□□ -0.73
A1CF-209ENST00000473480 CTSBP07858 339 aa10.51□□□□□ -0.73
A1CF-209ENST00000473480 ERCC3P19447 782 aa10.51□□□□□ -0.73
A1CF-209ENST00000473480 GNA15P30679 374 aa10.51□□□□□ -0.73
A1CF-209ENST00000473480 FAM20CQ8IXL6 584 aa10.51□□□□□ -0.73
A1CF-209ENST00000473480 MYOM1P52179 1685 aa10.5□□□□□ -0.73
A1CF-209ENST00000473480 DLC1Q96QB1 1528 aa10.5□□□□□ -0.73
A1CF-209ENST00000473480 ZBTB7CA1YPR0 619 aa10.5□□□□□ -0.73
A1CF-209ENST00000473480 ECEL1O95672 775 aa10.5□□□□□ -0.73
A1CF-209ENST00000473480 BMP3P12645 472 aa10.5□□□□□ -0.73
A1CF-209ENST00000473480 SLC51AQ86UW1 340 aa10.5□□□□□ -0.73
A1CF-209ENST00000473480 CEP44Q9C0F1 390 aa10.5□□□□□ -0.73
A1CF-209ENST00000473480 RAD18Q9NS91 495 aa10.5□□□□□ -0.73
A1CF-209ENST00000473480 KANK1Q14678 1352 aa10.5□□□□□ -0.73
A1CF-209ENST00000473480 ZBTB7AO95365 584 aa10.49□□□□□ -0.73
A1CF-209ENST00000473480 HNRNPUQ00839 825 aaKnown RBP eCLIP10.49□□□□□ -0.73
A1CF-209ENST00000473480 SOX4Q06945 474 aaPredicted RBP10.49□□□□□ -0.73
A1CF-209ENST00000473480 PDE3AQ14432 1141 aa10.49□□□□□ -0.73
A1CF-209ENST00000473480 DNAJC5GQ8N7S2 189 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms