RNA–Protein interactions for RNA: ENST00000472991.5

SMC4-214, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-214ENST00000472991 TCP10L2B9ZVM9 353 aa10.99□□□□□ -0.65
SMC4-214ENST00000472991 TRAF5O00463 557 aa10.99□□□□□ -0.65
SMC4-214ENST00000472991 IGSF3O75054 1194 aa10.99□□□□□ -0.65
SMC4-214ENST00000472991 CHGBP05060 677 aa10.99□□□□□ -0.65
SMC4-214ENST00000472991 ADD2P35612 726 aa10.99□□□□□ -0.65
SMC4-214ENST00000472991 FMR1Q06787 632 aaKnown RBP eCLIP10.99□□□□□ -0.653e-7■□□□□ 10
SMC4-214ENST00000472991 SLFNL1Q499Z3 407 aa10.99□□□□□ -0.65
SMC4-214ENST00000472991 SLC9C2Q5TAH2 1124 aa10.99□□□□□ -0.65
SMC4-214ENST00000472991 CDC42EP5Q6NZY7 148 aa10.99□□□□□ -0.65
SMC4-214ENST00000472991 CDC37L1Q7L3B6 337 aa10.99□□□□□ -0.65
SMC4-214ENST00000472991 USP48Q86UV5 1035 aa10.99□□□□□ -0.65
SMC4-214ENST00000472991 NOL10Q9BSC4 688 aaKnown RBP10.99□□□□□ -0.65
SMC4-214ENST00000472991 FSD1Q9BTV5 496 aa10.99□□□□□ -0.65
SMC4-214ENST00000472991 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.99□□□□□ -0.65
SMC4-214ENST00000472991 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.99□□□□□ -0.65
SMC4-214ENST00000472991 AATFQ9NY61 560 aaKnown RBP eCLIP10.99□□□□□ -0.654e-8■■■■■ 116
SMC4-214ENST00000472991 TMOD2Q9NZR1 351 aa10.99□□□□□ -0.65
SMC4-214ENST00000472991 ZNF532Q9HCE3 1301 aa10.99□□□□□ -0.65
SMC4-214ENST00000472991 RFX7Q2KHR2 1363 aa10.99□□□□□ -0.65
SMC4-214ENST00000472991 TCRBV5S4A2TA0A5A2 114 aa10.98□□□□□ -0.65
SMC4-214ENST00000472991 SLC10A3P09131 477 aa10.98□□□□□ -0.65
SMC4-214ENST00000472991 DYNLL1P63167 89 aaKnown RBP10.98□□□□□ -0.65
SMC4-214ENST00000472991 BLOC1S3Q6QNY0 202 aa10.98□□□□□ -0.65
SMC4-214ENST00000472991 MIGA1Q8NAN2 632 aa10.98□□□□□ -0.65
SMC4-214ENST00000472991 USP40Q9NVE5 1235 aa10.98□□□□□ -0.65
SMC4-214ENST00000472991 PASKQ96RG2 1323 aa10.98□□□□□ -0.65
SMC4-214ENST00000472991 CNTNAP1P78357 1384 aa10.98□□□□□ -0.65
SMC4-214ENST00000472991 SSC5DA1L4H1 1573 aa10.98□□□□□ -0.65
SMC4-214ENST00000472991 ACTN4O43707 911 aaKnown RBP10.97□□□□□ -0.65
SMC4-214ENST00000472991 BAG3O95817 575 aa10.97□□□□□ -0.65
SMC4-214ENST00000472991 CFHP08603 1231 aa10.97□□□□□ -0.65
SMC4-214ENST00000472991 RHBDL3P58872 404 aa10.97□□□□□ -0.65
SMC4-214ENST00000472991 C1QTNF8P60827 252 aa10.97□□□□□ -0.65
SMC4-214ENST00000472991 NFIAQ12857 509 aa10.97□□□□□ -0.65
SMC4-214ENST00000472991 TNFAIP1Q13829 316 aa10.97□□□□□ -0.65
SMC4-214ENST00000472991 TTC22Q5TAA0 569 aa10.97□□□□□ -0.65
SMC4-214ENST00000472991 PRAMEF18Q5VWM3 479 aa10.97□□□□□ -0.65
SMC4-214ENST00000472991 ZSCAN25Q6NSZ9 544 aa10.97□□□□□ -0.65
SMC4-214ENST00000472991 TMED8Q6PL24 325 aaPredicted RBP10.97□□□□□ -0.65
SMC4-214ENST00000472991 EVI5LQ96CN4 794 aa10.97□□□□□ -0.65
SMC4-214ENST00000472991 CDCA5Q96FF9 252 aa10.97□□□□□ -0.65
SMC4-214ENST00000472991 PRKD2Q9BZL6 878 aa10.97□□□□□ -0.65
SMC4-214ENST00000472991 ZNF408Q9H9D4 720 aa10.97□□□□□ -0.65
SMC4-214ENST00000472991 DOCK1Q14185 1865 aa10.96□□□□□ -0.65
SMC4-214ENST00000472991 LAMA4Q16363 1823 aa10.96□□□□□ -0.65
SMC4-214ENST00000472991 RPAP1Q9BWH6 1393 aaPredicted RBP10.96□□□□□ -0.65
SMC4-214ENST00000472991 WDHD1O75717 1129 aaPredicted RBP10.96□□□□□ -0.65
SMC4-214ENST00000472991 GSPT1P15170 499 aaKnown RBP10.96□□□□□ -0.65
SMC4-214ENST00000472991 TNNI2P48788 182 aa10.96□□□□□ -0.65
SMC4-214ENST00000472991 RGS3P49796 1198 aa10.96□□□□□ -0.65
SMC4-214ENST00000472991 TCP10Q12799 353 aa10.96□□□□□ -0.65
SMC4-214ENST00000472991 PICALMQ13492 652 aa10.96□□□□□ -0.65
SMC4-214ENST00000472991 RASA3Q14644 834 aa10.96□□□□□ -0.65
SMC4-214ENST00000472991 UBE3CQ15386 1083 aa10.96□□□□□ -0.65
SMC4-214ENST00000472991 KMT5BQ4FZB7 885 aa10.96□□□□□ -0.65
SMC4-214ENST00000472991 FKBP1CQ5VVH2 108 aa10.96□□□□□ -0.65
SMC4-214ENST00000472991 TEX11Q8IYF3 940 aa10.96□□□□□ -0.65
SMC4-214ENST00000472991 SH3RF3Q8TEJ3 882 aaPredicted RBP10.96□□□□□ -0.65
SMC4-214ENST00000472991 RILPL2Q969X0 211 aa10.96□□□□□ -0.65
SMC4-214ENST00000472991 TMEM39BQ9GZU3 492 aa10.96□□□□□ -0.65
SMC4-214ENST00000472991 DEFB129Q9H1M3 183 aa10.96□□□□□ -0.65
SMC4-214ENST00000472991 DDX4Q9NQI0 724 aaKnown RBP10.96□□□□□ -0.65
SMC4-214ENST00000472991 PPP2R3BQ9Y5P8 575 aa10.96□□□□□ -0.65
SMC4-214ENST00000472991 MAGEB6P1A0A0J9YX57 407 aa10.95□□□□□ -0.66
SMC4-214ENST00000472991 RNF113AO15541 343 aaKnown RBP10.95□□□□□ -0.66
SMC4-214ENST00000472991 MBD4O95243 580 aa10.95□□□□□ -0.66
SMC4-214ENST00000472991 CELF2O95319 508 aaKnown RBP10.95□□□□□ -0.66
SMC4-214ENST00000472991 ZFYP08048 801 aaPredicted RBP10.95□□□□□ -0.66
SMC4-214ENST00000472991 LRRFIP1Q32MZ4 808 aaKnown RBP10.95□□□□□ -0.66
SMC4-214ENST00000472991 FAM83AQ86UY5 434 aa10.95□□□□□ -0.66
SMC4-214ENST00000472991 LCORLQ8N3X6 602 aa10.95□□□□□ -0.66
SMC4-214ENST00000472991 APPBP2Q92624 585 aa10.95□□□□□ -0.66
SMC4-214ENST00000472991 RIOK1Q9BRS2 568 aaKnown RBP10.95□□□□□ -0.66
SMC4-214ENST00000472991 IDI2Q9BXS1 227 aa10.95□□□□□ -0.66
SMC4-214ENST00000472991 PUS7LQ9H0K6 701 aaKnown RBP10.95□□□□□ -0.66
SMC4-214ENST00000472991 ARMT1Q9H993 441 aa10.95□□□□□ -0.66
SMC4-214ENST00000472991 COL2A1P02458 1487 aaPredicted RBP10.94□□□□□ -0.66
SMC4-214ENST00000472991 ENTPD3O75355 529 aa10.94□□□□□ -0.66
SMC4-214ENST00000472991 CERS3Q8IU89 383 aa10.94□□□□□ -0.66
SMC4-214ENST00000472991 MAPKAPK5Q8IW41 473 aa10.94□□□□□ -0.66
SMC4-214ENST00000472991 FAM151AQ8WW52 585 aa10.94□□□□□ -0.66
SMC4-214ENST00000472991 OSBP2Q969R2 916 aa10.94□□□□□ -0.66
SMC4-214ENST00000472991 AIDAQ96BJ3 306 aa10.94□□□□□ -0.66
SMC4-214ENST00000472991 V9GY48 417 aaPredicted RBP10.94□□□□□ -0.66
SMC4-214ENST00000472991 FLT1P17948 1338 aa10.93□□□□□ -0.66
SMC4-214ENST00000472991 M0R2C6 588 aa10.93□□□□□ -0.66
SMC4-214ENST00000472991 SDSP20132 328 aa10.93□□□□□ -0.66
SMC4-214ENST00000472991 NF2P35240 595 aa10.93□□□□□ -0.66
SMC4-214ENST00000472991 USP5P45974 858 aa10.93□□□□□ -0.66
SMC4-214ENST00000472991 ZMYM1Q5SVZ6 1142 aa10.93□□□□□ -0.66
SMC4-214ENST00000472991 NBPF12Q5TAG4 269 aaPredicted RBP10.93□□□□□ -0.66
SMC4-214ENST00000472991 CST9Q5W186 159 aa10.93□□□□□ -0.66
SMC4-214ENST00000472991 ZFPM1Q8IX07 1006 aa10.93□□□□□ -0.66
SMC4-214ENST00000472991 TGFBRAP1Q8WUH2 860 aa10.93□□□□□ -0.66
SMC4-214ENST00000472991 TEPSINQ96N21 525 aa10.93□□□□□ -0.66
SMC4-214ENST00000472991 SEC62Q99442 399 aaKnown RBP10.93□□□□□ -0.66
SMC4-214ENST00000472991 CRNKL1Q9BZJ0 848 aaKnown RBP10.93□□□□□ -0.66
SMC4-214ENST00000472991 OSBPL5Q9H0X9 879 aaPredicted RBP10.93□□□□□ -0.66
SMC4-214ENST00000472991 PTPRFP10586 1907 aa10.93□□□□□ -0.66
SMC4-214ENST00000472991 PHIPQ8WWQ0 1821 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 371.3 ms