RNA–Protein interactions for RNA: ENST00000472815.5

HIF3A-206, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-206ENST00000472815 MTMR6Q9Y217 621 aa17.06■□□□□ 0.32
HIF3A-206ENST00000472815 PSMD14O00487 310 aa17.05■□□□□ 0.32
HIF3A-206ENST00000472815 RAD17O75943 681 aa17.05■□□□□ 0.32
HIF3A-206ENST00000472815 TNIP1Q15025 636 aa17.05■□□□□ 0.32
HIF3A-206ENST00000472815 GPR162Q16538 588 aa17.05■□□□□ 0.32
HIF3A-206ENST00000472815 RTN1Q16799 776 aa17.05■□□□□ 0.32
HIF3A-206ENST00000472815 SLC4A8Q2Y0W8 1093 aa17.05■□□□□ 0.32
HIF3A-206ENST00000472815 IDI2Q9BXS1 227 aa17.05■□□□□ 0.32
HIF3A-206ENST00000472815 TCP11L1Q9NUJ3 509 aa17.05■□□□□ 0.32
HIF3A-206ENST00000472815 UTRNP46939 3433 aa17.05■□□□□ 0.32
HIF3A-206ENST00000472815 DDAH1O94760 285 aa17.04■□□□□ 0.32
HIF3A-206ENST00000472815 CTDNEP1O95476 244 aa17.04■□□□□ 0.32
HIF3A-206ENST00000472815 TFAP4Q01664 338 aa17.04■□□□□ 0.32
HIF3A-206ENST00000472815 CSPP1Q1MSJ5 1256 aa17.04■□□□□ 0.32
HIF3A-206ENST00000472815 CFAP100Q494V2 611 aa17.04■□□□□ 0.32
HIF3A-206ENST00000472815 MCTP1Q6DN14 999 aa17.04■□□□□ 0.32
HIF3A-206ENST00000472815 DGKHQ86XP1 1220 aa17.04■□□□□ 0.32
HIF3A-206ENST00000472815 TRIM22Q8IYM9 498 aa17.04■□□□□ 0.32
HIF3A-206ENST00000472815 NKX2-3Q8TAU0 364 aa17.04■□□□□ 0.32
HIF3A-206ENST00000472815 WASF1Q92558 559 aa17.04■□□□□ 0.32
HIF3A-206ENST00000472815 ZSCAN16Q9H4T2 348 aaPredicted RBP17.04■□□□□ 0.32
HIF3A-206ENST00000472815 RBM28Q9NW13 759 aaKnown RBP17.04■□□□□ 0.32
HIF3A-206ENST00000472815 ORC3Q9UBD5 711 aaPredicted RBP17.04■□□□□ 0.32
HIF3A-206ENST00000472815 SMIM22K7EJ46 135 aa17.04■□□□□ 0.32
HIF3A-206ENST00000472815 YBX3P16989 372 aaKnown RBP eCLIP17.04■□□□□ 0.32
HIF3A-206ENST00000472815 CDK8P49336 464 aa17.04■□□□□ 0.32
HIF3A-206ENST00000472815 FAM47AQ5JRC9 791 aa17.04■□□□□ 0.32
HIF3A-206ENST00000472815 CIAPIN1Q6FI81 312 aa17.04■□□□□ 0.32
HIF3A-206ENST00000472815 DYNLL2Q96FJ2 89 aa17.04■□□□□ 0.32
HIF3A-206ENST00000472815 PPP4R3BQ5MIZ7 849 aa17.03■□□□□ 0.32
HIF3A-206ENST00000472815 FANCBQ8NB91 859 aa17.03■□□□□ 0.32
HIF3A-206ENST00000472815 NUP133Q8WUM0 1156 aa17.03■□□□□ 0.32
HIF3A-206ENST00000472815 EHD4Q9H223 541 aa17.03■□□□□ 0.32
HIF3A-206ENST00000472815 KAT14Q9H8E8 782 aa17.03■□□□□ 0.32
HIF3A-206ENST00000472815 SENP2Q9HC62 589 aa17.03■□□□□ 0.32
HIF3A-206ENST00000472815 SERPINB13Q9UIV8 391 aa17.03■□□□□ 0.32
HIF3A-206ENST00000472815 STK36Q9NRP7 1315 aa17.03■□□□□ 0.32
HIF3A-206ENST00000472815 NFKBIEO00221 500 aa17.02■□□□□ 0.32
HIF3A-206ENST00000472815 GRIN3BO60391 1043 aa17.02■□□□□ 0.32
HIF3A-206ENST00000472815 ADD1P35611 737 aaKnown RBP17.02■□□□□ 0.32
HIF3A-206ENST00000472815 SSRP1Q08945 709 aaKnown RBP17.02■□□□□ 0.32
HIF3A-206ENST00000472815 DLGAP5Q15398 846 aa17.02■□□□□ 0.32
HIF3A-206ENST00000472815 CTCFLQ8NI51 663 aaPredicted RBP17.02■□□□□ 0.32
HIF3A-206ENST00000472815 GMLQ99445 158 aa17.02■□□□□ 0.32
HIF3A-206ENST00000472815 TRIM34Q9BYJ4 488 aa17.02■□□□□ 0.32
HIF3A-206ENST00000472815 MYO1BO43795 1136 aa17.01■□□□□ 0.31
HIF3A-206ENST00000472815 ENTPD3O75355 529 aa17.01■□□□□ 0.31
HIF3A-206ENST00000472815 IFNAR1P17181 557 aa17.01■□□□□ 0.31
HIF3A-206ENST00000472815 RASA1P20936 1047 aa17.01■□□□□ 0.31
HIF3A-206ENST00000472815 RPS12P25398 132 aaKnown RBP17.01■□□□□ 0.31
HIF3A-206ENST00000472815 KIF5BP33176 963 aa17.01■□□□□ 0.31
HIF3A-206ENST00000472815 ARHGAP27Q6ZUM4 889 aa17.01■□□□□ 0.31
HIF3A-206ENST00000472815 RAB11FIP4Q86YS3 637 aa17.01■□□□□ 0.31
HIF3A-206ENST00000472815 ANKS1AQ92625 1134 aa17.01■□□□□ 0.31
HIF3A-206ENST00000472815 C8orf76Q96K31 380 aa17.01■□□□□ 0.31
HIF3A-206ENST00000472815 MYL10Q9BUA6 226 aa17.01■□□□□ 0.31
HIF3A-206ENST00000472815 DDX4Q9NQI0 724 aaKnown RBP17.01■□□□□ 0.31
HIF3A-206ENST00000472815 COL2A1P02458 1487 aaPredicted RBP17.01■□□□□ 0.31
HIF3A-206ENST00000472815 COL4A5P29400 1685 aa17.01■□□□□ 0.31
HIF3A-206ENST00000472815 DCAF8L1A6NGE4 600 aa17.01■□□□□ 0.31
HIF3A-206ENST00000472815 RXRAP19793 462 aa17.01■□□□□ 0.31
HIF3A-206ENST00000472815 EIF6P56537 245 aaKnown RBP17.01■□□□□ 0.31
HIF3A-206ENST00000472815 EVX2Q03828 476 aa17.01■□□□□ 0.31
HIF3A-206ENST00000472815 CXCL9Q07325 125 aa17.01■□□□□ 0.31
HIF3A-206ENST00000472815 TRIM29Q14134 588 aa17.01■□□□□ 0.31
HIF3A-206ENST00000472815 CDC37L1Q7L3B6 337 aa17.01■□□□□ 0.31
HIF3A-206ENST00000472815 CCDC144CPQ8IYA2 1237 aa17.01■□□□□ 0.31
HIF3A-206ENST00000472815 NEDD1Q8NHV4 660 aa17.01■□□□□ 0.31
HIF3A-206ENST00000472815 MAP3K14Q99558 947 aa17.01■□□□□ 0.31
HIF3A-206ENST00000472815 PI4KBQ9UBF8 816 aa17.01■□□□□ 0.31
HIF3A-206ENST00000472815 SPDYE2BA6NHP3 402 aa17■□□□□ 0.31
HIF3A-206ENST00000472815 SPDYE6P0CI01 402 aa17■□□□□ 0.31
HIF3A-206ENST00000472815 NCLP19338 710 aaKnown RBP17■□□□□ 0.31
HIF3A-206ENST00000472815 CDC27P30260 824 aa17■□□□□ 0.31
HIF3A-206ENST00000472815 AKAP17AQ02040 695 aaKnown RBP17■□□□□ 0.31
HIF3A-206ENST00000472815 GABPAQ06546 454 aa17■□□□□ 0.31
HIF3A-206ENST00000472815 ZSCAN29Q8IWY8 852 aaPredicted RBP17■□□□□ 0.31
HIF3A-206ENST00000472815 CRACR2BQ8N4Y2 399 aaPredicted RBP17■□□□□ 0.31
HIF3A-206ENST00000472815 MTMR14Q8NCE2 650 aa17■□□□□ 0.31
HIF3A-206ENST00000472815 PLIN4Q96Q06 1357 aa17■□□□□ 0.31
HIF3A-206ENST00000472815 TRAK2O60296 914 aa16.99■□□□□ 0.31
HIF3A-206ENST00000472815 FMNL1O95466 1100 aaPredicted RBP16.99■□□□□ 0.31
HIF3A-206ENST00000472815 NTRK3Q16288 839 aa16.99■□□□□ 0.31
HIF3A-206ENST00000472815 SLC44A5Q8NCS7 719 aa16.99■□□□□ 0.31
HIF3A-206ENST00000472815 CCDC17Q96LX7 622 aa16.99■□□□□ 0.31
HIF3A-206ENST00000472815 MYH6P13533 1939 aa16.99■□□□□ 0.31
HIF3A-206ENST00000472815 TCHHQ07283 1943 aa16.99■□□□□ 0.31
HIF3A-206ENST00000472815 FDPSP14324 419 aaKnown RBP16.99■□□□□ 0.31
HIF3A-206ENST00000472815 KRT85P78386 507 aa16.99■□□□□ 0.31
HIF3A-206ENST00000472815 TROAPQ12815 778 aa16.99■□□□□ 0.31
HIF3A-206ENST00000472815 NFIAQ12857 509 aa16.99■□□□□ 0.31
HIF3A-206ENST00000472815 TDRD3Q9H7E2 651 aaKnown RBP16.99■□□□□ 0.31
HIF3A-206ENST00000472815 FAM217BQ9NTX9 383 aaPredicted RBP16.99■□□□□ 0.31
HIF3A-206ENST00000472815 STX8Q9UNK0 236 aa16.99■□□□□ 0.31
HIF3A-206ENST00000472815 DEXIO95424 95 aa16.98■□□□□ 0.31
HIF3A-206ENST00000472815 XBP1P17861 261 aa16.98■□□□□ 0.31
HIF3A-206ENST00000472815 GNAQP50148 359 aa16.98■□□□□ 0.31
HIF3A-206ENST00000472815 FKBP1CQ5VVH2 108 aa16.98■□□□□ 0.31
HIF3A-206ENST00000472815 FOXP4Q8IVH2 680 aaPredicted RBP16.98■□□□□ 0.31
HIF3A-206ENST00000472815 PNMA1Q8ND90 353 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms