RNA–Protein interactions for RNA: ENST00000471047.1

CLK2-204, Transcript of CDC like kinase 2, humanhuman

TSL 3

Gene CLK2, Length 701 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-204ENST00000471047 NCOA7Q8NI08 942 aa11.64□□□□□ -0.55
CLK2-204ENST00000471047 TGFBRAP1Q8WUH2 860 aa11.64□□□□□ -0.55
CLK2-204ENST00000471047 CNNM2Q9H8M5 875 aa11.64□□□□□ -0.55
CLK2-204ENST00000471047 PAPPA2Q9BXP8 1791 aa11.64□□□□□ -0.55
CLK2-204ENST00000471047 FLT1P17948 1338 aa11.63□□□□□ -0.55
CLK2-204ENST00000471047 NEDD4P46934 1319 aa11.63□□□□□ -0.55
CLK2-204ENST00000471047 MYH1P12882 1939 aa11.63□□□□□ -0.55
CLK2-204ENST00000471047 SMIM22K7EJ46 135 aa11.63□□□□□ -0.55
CLK2-204ENST00000471047 WDHD1O75717 1129 aaPredicted RBP11.63□□□□□ -0.55
CLK2-204ENST00000471047 PCP11498 1178 aaKnown RBP11.63□□□□□ -0.55
CLK2-204ENST00000471047 USP5P45974 858 aa11.63□□□□□ -0.55
CLK2-204ENST00000471047 MMP14P50281 582 aa11.63□□□□□ -0.55
CLK2-204ENST00000471047 ANTXR2P58335 489 aa11.63□□□□□ -0.55
CLK2-204ENST00000471047 CUL4AQ13619 759 aa11.63□□□□□ -0.55
CLK2-204ENST00000471047 C12orf60Q5U649 245 aa11.63□□□□□ -0.55
CLK2-204ENST00000471047 CDC42EP5Q6NZY7 148 aa11.63□□□□□ -0.55
CLK2-204ENST00000471047 MTMR14Q8NCE2 650 aa11.63□□□□□ -0.55
CLK2-204ENST00000471047 NKX2-3Q8TAU0 364 aa11.63□□□□□ -0.55
CLK2-204ENST00000471047 TMX3Q96JJ7 454 aa11.63□□□□□ -0.55
CLK2-204ENST00000471047 RNF41Q9H4P4 317 aaPredicted RBP11.63□□□□□ -0.55
CLK2-204ENST00000471047 USP40Q9NVE5 1235 aa11.63□□□□□ -0.55
CLK2-204ENST00000471047 MCM9Q9NXL9 1143 aa11.63□□□□□ -0.55
CLK2-204ENST00000471047 DAXXQ9UER7 740 aaPredicted RBP11.63□□□□□ -0.55
CLK2-204ENST00000471047 LIMCH1Q9UPQ0 1083 aa11.63□□□□□ -0.55
CLK2-204ENST00000471047 COLQQ9Y215 455 aaPredicted RBP11.63□□□□□ -0.55
CLK2-204ENST00000471047 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.63□□□□□ -0.55
CLK2-204ENST00000471047 TRIM17Q9Y577 477 aa11.63□□□□□ -0.55
CLK2-204ENST00000471047 CYP2D7A0A087X1C5 515 aa11.62□□□□□ -0.55
CLK2-204ENST00000471047 MINDY4BA8MYZ0 360 aa11.62□□□□□ -0.55
CLK2-204ENST00000471047 NPM3O75607 178 aaKnown RBP11.62□□□□□ -0.55
CLK2-204ENST00000471047 USP17L8P0C7I0 530 aa11.62□□□□□ -0.55
CLK2-204ENST00000471047 EN2P19622 333 aaPredicted RBP11.62□□□□□ -0.55
CLK2-204ENST00000471047 MCM5P33992 734 aa11.62□□□□□ -0.55
CLK2-204ENST00000471047 EVX2Q03828 476 aa11.62□□□□□ -0.55
CLK2-204ENST00000471047 TRDNQ13061 729 aa11.62□□□□□ -0.55
CLK2-204ENST00000471047 TTLL12Q14166 644 aaPredicted RBP11.62□□□□□ -0.55
CLK2-204ENST00000471047 CFAP100Q494V2 611 aa11.62□□□□□ -0.55
CLK2-204ENST00000471047 MFSD6Q6ZSS7 791 aa11.62□□□□□ -0.55
CLK2-204ENST00000471047 OTOP1Q7RTM1 612 aa11.62□□□□□ -0.55
CLK2-204ENST00000471047 RALYLQ86SE5 291 aaKnown RBP11.62□□□□□ -0.55
CLK2-204ENST00000471047 MAPKAPK5Q8IW41 473 aa11.62□□□□□ -0.55
CLK2-204ENST00000471047 ZSCAN31Q96LW9 406 aaPredicted RBP11.62□□□□□ -0.55
CLK2-204ENST00000471047 TCEANC2Q96MN5 208 aa11.62□□□□□ -0.55
CLK2-204ENST00000471047 MTA3Q9BTC8 594 aa11.62□□□□□ -0.55
CLK2-204ENST00000471047 IDI2Q9BXS1 227 aa11.62□□□□□ -0.55
CLK2-204ENST00000471047 KRT23Q9C075 422 aa11.62□□□□□ -0.55
CLK2-204ENST00000471047 DDX4Q9NQI0 724 aaKnown RBP11.62□□□□□ -0.55
CLK2-204ENST00000471047 INCENPQ9NQS7 918 aa11.62□□□□□ -0.55
CLK2-204ENST00000471047 PCDHAC2Q9Y5I4 1007 aa11.62□□□□□ -0.55
CLK2-204ENST00000471047 PRC1O43663 620 aa11.61□□□□□ -0.55
CLK2-204ENST00000471047 ORC4O43929 436 aa11.61□□□□□ -0.55
CLK2-204ENST00000471047 CYP2D6P10635 497 aa11.61□□□□□ -0.55
CLK2-204ENST00000471047 DDIT3P35638 169 aa11.61□□□□□ -0.55
CLK2-204ENST00000471047 NT5C2P49902 561 aa11.61□□□□□ -0.55
CLK2-204ENST00000471047 EVCP57679 992 aa11.61□□□□□ -0.55
CLK2-204ENST00000471047 NBPF9Q3BBW0 867 aa11.61□□□□□ -0.55
CLK2-204ENST00000471047 Q6ZUG5 572 aa11.61□□□□□ -0.55
CLK2-204ENST00000471047 CYB5R4Q7L1T6 521 aa11.61□□□□□ -0.55
CLK2-204ENST00000471047 OGFOD1Q8N543 542 aa11.61□□□□□ -0.55
CLK2-204ENST00000471047 ZBED3Q96IU2 234 aaPredicted RBP11.61□□□□□ -0.55
CLK2-204ENST00000471047 PRMT6Q96LA8 375 aaPredicted RBP11.61□□□□□ -0.55
CLK2-204ENST00000471047 CFHR5Q9BXR6 569 aa11.61□□□□□ -0.55
CLK2-204ENST00000471047 MYOZ2Q9NPC6 264 aa11.61□□□□□ -0.55
CLK2-204ENST00000471047 CEP290O15078 2479 aa11.61□□□□□ -0.55
CLK2-204ENST00000471047 PITPNM2Q9BZ72 1349 aa11.6□□□□□ -0.55
CLK2-204ENST00000471047 COL2A1P02458 1487 aaPredicted RBP11.6□□□□□ -0.55
CLK2-204ENST00000471047 SPDYE2BA6NHP3 402 aa11.6□□□□□ -0.55
CLK2-204ENST00000471047 B4E1Z4 1266 aa11.6□□□□□ -0.55
CLK2-204ENST00000471047 LARGE1O95461 756 aa11.6□□□□□ -0.55
CLK2-204ENST00000471047 SPDYE6P0CI01 402 aa11.6□□□□□ -0.55
CLK2-204ENST00000471047 PLCD1P51178 756 aa11.6□□□□□ -0.55
CLK2-204ENST00000471047 SREBF2Q12772 1141 aa11.6□□□□□ -0.55
CLK2-204ENST00000471047 PRKG1Q13976 671 aa11.6□□□□□ -0.55
CLK2-204ENST00000471047 ME3Q16798 604 aa11.6□□□□□ -0.55
CLK2-204ENST00000471047 INTS4Q96HW7 963 aaKnown RBP11.6□□□□□ -0.55
CLK2-204ENST00000471047 TMEM87BQ96K49 555 aa11.6□□□□□ -0.55
CLK2-204ENST00000471047 OSBPL5Q9H0X9 879 aaPredicted RBP11.6□□□□□ -0.55
CLK2-204ENST00000471047 SH2B1Q9NRF2 756 aaPredicted RBP11.6□□□□□ -0.55
CLK2-204ENST00000471047 ZSWIM5Q9P217 1185 aa11.6□□□□□ -0.55
CLK2-204ENST00000471047 TPCN1Q9ULQ1 816 aa11.6□□□□□ -0.55
CLK2-204ENST00000471047 SIPA1L1O43166 1804 aa11.59□□□□□ -0.55
CLK2-204ENST00000471047 KDM4AO75164 1064 aa11.59□□□□□ -0.55
CLK2-204ENST00000471047 POLR3DP05423 398 aaPredicted RBP11.59□□□□□ -0.55
CLK2-204ENST00000471047 SLC3A2P08195 630 aaKnown RBP11.59□□□□□ -0.55
CLK2-204ENST00000471047 RBM5P52756 815 aaKnown RBP eCLIP11.59□□□□□ -0.55
CLK2-204ENST00000471047 NFIAQ12857 509 aa11.59□□□□□ -0.55
CLK2-204ENST00000471047 NOL8Q76FK4 1167 aaKnown RBP11.59□□□□□ -0.55
CLK2-204ENST00000471047 CHST3Q7LGC8 479 aa11.59□□□□□ -0.55
CLK2-204ENST00000471047 AMOTL1Q8IY63 956 aa11.59□□□□□ -0.55
CLK2-204ENST00000471047 IGDCC4Q8TDY8 1250 aa11.59□□□□□ -0.55
CLK2-204ENST00000471047 ESR2Q92731 530 aa11.59□□□□□ -0.55
CLK2-204ENST00000471047 BRF1Q92994 677 aa11.59□□□□□ -0.55
CLK2-204ENST00000471047 LARP6Q9BRS8 491 aaKnown RBP11.59□□□□□ -0.55
CLK2-204ENST00000471047 LRRC2Q9BYS8 371 aa11.59□□□□□ -0.55
CLK2-204ENST00000471047 TDRD3Q9H7E2 651 aaKnown RBP11.59□□□□□ -0.55
CLK2-204ENST00000471047 FAM198AQ9UFP1 575 aa11.59□□□□□ -0.55
CLK2-204ENST00000471047 SAP30BPQ9UHR5 308 aaKnown RBP11.59□□□□□ -0.55
CLK2-204ENST00000471047 FZD1Q9UP38 647 aa11.59□□□□□ -0.55
CLK2-204ENST00000471047 SH2B2O14492 632 aaPredicted RBP11.58□□□□□ -0.56
CLK2-204ENST00000471047 LIFRP42702 1097 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms