RNA–Protein interactions for RNA: ENST00000468602.5

MSH5-214, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-214ENST00000468602 HHIPL1Q96JK4 782 aa13.35□□□□□ -0.27
MSH5-214ENST00000468602 UPF2Q9HAU5 1272 aaKnown RBP13.35□□□□□ -0.27
MSH5-214ENST00000468602 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.35□□□□□ -0.27
MSH5-214ENST00000468602 MYH8P13535 1937 aa13.35□□□□□ -0.27
MSH5-214ENST00000468602 SMIM22K7EJ46 135 aa13.34□□□□□ -0.27
MSH5-214ENST00000468602 PSMA5P28066 241 aa13.34□□□□□ -0.27
MSH5-214ENST00000468602 EVX2Q03828 476 aa13.34□□□□□ -0.27
MSH5-214ENST00000468602 CCDC178Q5BJE1 867 aa13.34□□□□□ -0.27
MSH5-214ENST00000468602 MB21D2Q8IYB1 491 aaPredicted RBP13.34□□□□□ -0.27
MSH5-214ENST00000468602 NCOA7Q8NI08 942 aa13.34□□□□□ -0.27
MSH5-214ENST00000468602 ESR2Q92731 530 aa13.34□□□□□ -0.27
MSH5-214ENST00000468602 KIF2CQ99661 725 aa13.34□□□□□ -0.27
MSH5-214ENST00000468602 AGXT2Q9BYV1 514 aa13.34□□□□□ -0.27
MSH5-214ENST00000468602 C22orf23Q9BZE7 217 aa13.34□□□□□ -0.27
MSH5-214ENST00000468602 ZSWIM6Q9HCJ5 1215 aa13.34□□□□□ -0.27
MSH5-214ENST00000468602 ASNSP08243 561 aa13.33□□□□□ -0.28
MSH5-214ENST00000468602 IREB2P48200 963 aaKnown RBP13.33□□□□□ -0.28
MSH5-214ENST00000468602 MAP3K9P80192 1104 aa13.33□□□□□ -0.28
MSH5-214ENST00000468602 EXOSC10Q01780 885 aaKnown RBP13.33□□□□□ -0.28
MSH5-214ENST00000468602 CTDSPL2Q05D32 466 aa13.33□□□□□ -0.28
MSH5-214ENST00000468602 CERKLQ49MI3 558 aaPredicted RBP13.33□□□□□ -0.28
MSH5-214ENST00000468602 CST9Q5W186 159 aa13.33□□□□□ -0.28
MSH5-214ENST00000468602 ARMC9Q7Z3E5 817 aa13.33□□□□□ -0.28
MSH5-214ENST00000468602 CRACR2BQ8N4Y2 399 aaPredicted RBP13.33□□□□□ -0.28
MSH5-214ENST00000468602 DYNLL2Q96FJ2 89 aa13.33□□□□□ -0.28
MSH5-214ENST00000468602 TTC14Q96N46 770 aa13.33□□□□□ -0.28
MSH5-214ENST00000468602 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.33□□□□□ -0.28
MSH5-214ENST00000468602 TAF6LQ9Y6J9 622 aa13.33□□□□□ -0.28
MSH5-214ENST00000468602 DOCK1Q14185 1865 aa13.33□□□□□ -0.28
MSH5-214ENST00000468602 HAND2P61296 217 aa13.32□□□□□ -0.28
MSH5-214ENST00000468602 TRDNQ13061 729 aa13.32□□□□□ -0.28
MSH5-214ENST00000468602 RRP1BQ14684 758 aaKnown RBP13.32□□□□□ -0.28
MSH5-214ENST00000468602 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.32□□□□□ -0.28
MSH5-214ENST00000468602 TMEM179Q6ZVK1 233 aa13.32□□□□□ -0.28
MSH5-214ENST00000468602 DGKHQ86XP1 1220 aa13.32□□□□□ -0.28
MSH5-214ENST00000468602 ANKRD13AQ8IZ07 590 aa13.32□□□□□ -0.28
MSH5-214ENST00000468602 SCYL3Q8IZE3 742 aa13.32□□□□□ -0.28
MSH5-214ENST00000468602 ZNF444Q8N0Y2 327 aaPredicted RBP13.32□□□□□ -0.28
MSH5-214ENST00000468602 MKL1Q969V6 931 aa13.32□□□□□ -0.28
MSH5-214ENST00000468602 NEK1Q96PY6 1258 aa13.32□□□□□ -0.28
MSH5-214ENST00000468602 MKNK2Q9HBH9 465 aa13.32□□□□□ -0.28
MSH5-214ENST00000468602 GBA2Q9HCG7 927 aaPredicted RBP13.32□□□□□ -0.28
MSH5-214ENST00000468602 OTOFQ9HC10 1997 aa13.32□□□□□ -0.28
MSH5-214ENST00000468602 NEDD4P46934 1319 aa13.32□□□□□ -0.28
MSH5-214ENST00000468602 TRAF5O00463 557 aa13.31□□□□□ -0.28
MSH5-214ENST00000468602 GUCY1A2P33402 732 aa13.31□□□□□ -0.28
MSH5-214ENST00000468602 LIFRP42702 1097 aa13.31□□□□□ -0.28
MSH5-214ENST00000468602 EVCP57679 992 aa13.31□□□□□ -0.28
MSH5-214ENST00000468602 ADCK5Q3MIX3 580 aa13.31□□□□□ -0.28
MSH5-214ENST00000468602 PRAMEF18Q5VWM3 479 aa13.31□□□□□ -0.28
MSH5-214ENST00000468602 DHX32Q7L7V1 743 aaKnown RBP13.31□□□□□ -0.28
MSH5-214ENST00000468602 SLC44A5Q8NCS7 719 aa13.31□□□□□ -0.28
MSH5-214ENST00000468602 TMEM87BQ96K49 555 aa13.31□□□□□ -0.28
MSH5-214ENST00000468602 WDR18Q9BV38 432 aa13.31□□□□□ -0.28
MSH5-214ENST00000468602 TRIM34Q9BYJ4 488 aa13.31□□□□□ -0.28
MSH5-214ENST00000468602 KANSL2Q9H9L4 492 aa13.31□□□□□ -0.28
MSH5-214ENST00000468602 ZSWIM5Q9P217 1185 aa13.31□□□□□ -0.28
MSH5-214ENST00000468602 NYAP2Q9P242 653 aa13.31□□□□□ -0.28
MSH5-214ENST00000468602 SCAF8Q9UPN6 1271 aaKnown RBP13.31□□□□□ -0.28
MSH5-214ENST00000468602 PHIPQ8WWQ0 1821 aa13.3□□□□□ -0.28
MSH5-214ENST00000468602 ATAD5Q96QE3 1844 aa13.3□□□□□ -0.28
MSH5-214ENST00000468602 CELF2O95319 508 aaKnown RBP13.3□□□□□ -0.28
MSH5-214ENST00000468602 MCM5P33992 734 aa13.3□□□□□ -0.28
MSH5-214ENST00000468602 RCAN1P53805 252 aa13.3□□□□□ -0.28
MSH5-214ENST00000468602 ANTXR2P58335 489 aa13.3□□□□□ -0.28
MSH5-214ENST00000468602 SEC23AQ15436 765 aa13.3□□□□□ -0.28
MSH5-214ENST00000468602 ABCB5Q2M3G0 1257 aa13.3□□□□□ -0.28
MSH5-214ENST00000468602 RUFY3Q7L099 469 aa13.3□□□□□ -0.28
MSH5-214ENST00000468602 MIGA2Q7L4E1 593 aa13.3□□□□□ -0.28
MSH5-214ENST00000468602 SGMS1Q86VZ5 419 aa13.3□□□□□ -0.28
MSH5-214ENST00000468602 TMTC2Q8N394 836 aa13.3□□□□□ -0.28
MSH5-214ENST00000468602 C2orf69Q8N8R5 385 aa13.3□□□□□ -0.28
MSH5-214ENST00000468602 ZBTB21Q9ULJ3 1066 aa13.3□□□□□ -0.28
MSH5-214ENST00000468602 TLL2Q9Y6L7 1015 aa13.3□□□□□ -0.28
MSH5-214ENST00000468602 SPDYE5A6NIY4 337 aa13.29□□□□□ -0.28
MSH5-214ENST00000468602 KDM4AO75164 1064 aa13.29□□□□□ -0.28
MSH5-214ENST00000468602 AKR1B1P15121 316 aa13.29□□□□□ -0.28
MSH5-214ENST00000468602 RPS6KB1P23443 525 aa13.29□□□□□ -0.28
MSH5-214ENST00000468602 JAG1P78504 1218 aa13.29□□□□□ -0.28
MSH5-214ENST00000468602 TFAP4Q01664 338 aa13.29□□□□□ -0.28
MSH5-214ENST00000468602 PPATQ06203 517 aa13.29□□□□□ -0.28
MSH5-214ENST00000468602 RCSD1Q6JBY9 416 aa13.29□□□□□ -0.28
MSH5-214ENST00000468602 DLK2Q6UY11 383 aa13.29□□□□□ -0.28
MSH5-214ENST00000468602 RALYLQ86SE5 291 aaKnown RBP13.29□□□□□ -0.28
MSH5-214ENST00000468602 SAPCD2Q86UD0 394 aa13.29□□□□□ -0.28
MSH5-214ENST00000468602 IQCA1Q86XH1 822 aa13.29□□□□□ -0.28
MSH5-214ENST00000468602 SIAH1Q8IUQ4 282 aa13.29□□□□□ -0.28
MSH5-214ENST00000468602 NKX2-3Q8TAU0 364 aa13.29□□□□□ -0.28
MSH5-214ENST00000468602 IGDCC4Q8TDY8 1250 aa13.29□□□□□ -0.28
MSH5-214ENST00000468602 WRNIP1Q96S55 665 aa13.29□□□□□ -0.28
MSH5-214ENST00000468602 CABP5Q9NP86 173 aa13.29□□□□□ -0.28
MSH5-214ENST00000468602 IL17RBQ9NRM6 502 aa13.29□□□□□ -0.28
MSH5-214ENST00000468602 MTMR4Q9NYA4 1195 aa13.29□□□□□ -0.28
MSH5-214ENST00000468602 SNCAIPQ9Y6H5 919 aa13.29□□□□□ -0.28
MSH5-214ENST00000468602 TSPY2A6NKD2 308 aa13.28□□□□□ -0.28
MSH5-214ENST00000468602 TMEM88BA6NKF7 163 aa13.28□□□□□ -0.28
MSH5-214ENST00000468602 FAM196BA6NMK8 535 aa13.28□□□□□ -0.28
MSH5-214ENST00000468602 USP17L5A8MUK1 530 aa13.28□□□□□ -0.28
MSH5-214ENST00000468602 B4E1Z4 1266 aa13.28□□□□□ -0.28
MSH5-214ENST00000468602 PRDM1O75626 825 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms