RNA–Protein interactions for RNA: ENST00000468209.5

NSMCE4A-206, Transcript of NSE4 homolog A, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE4A, Length 1,041 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE4A-206ENST00000468209 USP6NLQ92738 828 aa11.14□□□□□ -0.63
NSMCE4A-206ENST00000468209 IDI2Q9BXS1 227 aa11.14□□□□□ -0.63
NSMCE4A-206ENST00000468209 PRDM5Q9NQX1 630 aaPredicted RBP11.14□□□□□ -0.63
NSMCE4A-206ENST00000468209 PRKAG2Q9UGJ0 569 aa11.14□□□□□ -0.63
NSMCE4A-206ENST00000468209 ATP11BQ9Y2G3 1177 aa11.14□□□□□ -0.63
NSMCE4A-206ENST00000468209 TRAK2O60296 914 aa11.13□□□□□ -0.63
NSMCE4A-206ENST00000468209 ENTPD3O75355 529 aa11.13□□□□□ -0.63
NSMCE4A-206ENST00000468209 CDK11BP21127 795 aaKnown RBP11.13□□□□□ -0.63
NSMCE4A-206ENST00000468209 FGFR2P21802 821 aa11.13□□□□□ -0.63
NSMCE4A-206ENST00000468209 ZEB1P37275 1124 aaPredicted RBP11.13□□□□□ -0.63
NSMCE4A-206ENST00000468209 PICALMQ13492 652 aa11.13□□□□□ -0.63
NSMCE4A-206ENST00000468209 RRP1BQ14684 758 aaKnown RBP11.13□□□□□ -0.63
NSMCE4A-206ENST00000468209 E2F4Q16254 413 aa11.13□□□□□ -0.63
NSMCE4A-206ENST00000468209 TMCO4Q5TGY1 634 aa11.13□□□□□ -0.63
NSMCE4A-206ENST00000468209 SMYD5Q6GMV2 418 aa11.13□□□□□ -0.63
NSMCE4A-206ENST00000468209 SH3RF1Q7Z6J0 888 aa11.13□□□□□ -0.63
NSMCE4A-206ENST00000468209 PORCNQ9H237 461 aa11.13□□□□□ -0.63
NSMCE4A-206ENST00000468209 BICC1Q9H694 974 aaKnown RBP11.13□□□□□ -0.63
NSMCE4A-206ENST00000468209 C9orf78Q9NZ63 289 aaPredicted RBP11.13□□□□□ -0.63
NSMCE4A-206ENST00000468209 FLRT1Q9NZU1 646 aa11.13□□□□□ -0.63
NSMCE4A-206ENST00000468209 SIPA1L1O43166 1804 aa11.13□□□□□ -0.63
NSMCE4A-206ENST00000468209 KIF16BQ96L93 1317 aa11.12□□□□□ -0.63
NSMCE4A-206ENST00000468209 CHD9Q3L8U1 2897 aa11.12□□□□□ -0.63
NSMCE4A-206ENST00000468209 LDHBP07195 334 aaKnown RBP11.12□□□□□ -0.63
NSMCE4A-206ENST00000468209 NBPF7P0C2Y1 421 aaPredicted RBP11.12□□□□□ -0.63
NSMCE4A-206ENST00000468209 DSG3P32926 999 aa11.12□□□□□ -0.63
NSMCE4A-206ENST00000468209 RBM25P49756 843 aaKnown RBP11.12□□□□□ -0.63
NSMCE4A-206ENST00000468209 NUBP1P53384 320 aa11.12□□□□□ -0.63
NSMCE4A-206ENST00000468209 EPHB4P54760 987 aa11.12□□□□□ -0.63
NSMCE4A-206ENST00000468209 PUM3Q15397 648 aaKnown RBP11.12□□□□□ -0.63
NSMCE4A-206ENST00000468209 MORN1Q5T089 497 aa11.12□□□□□ -0.63
NSMCE4A-206ENST00000468209 POTEEQ6S8J3 1075 aa11.12□□□□□ -0.63
NSMCE4A-206ENST00000468209 ANKRD44Q8N8A2 993 aa11.12□□□□□ -0.63
NSMCE4A-206ENST00000468209 ZNF280CQ8ND82 737 aa11.12□□□□□ -0.63
NSMCE4A-206ENST00000468209 PPM1EQ8WY54 764 aa11.12□□□□□ -0.63
NSMCE4A-206ENST00000468209 SNX27Q96L92 541 aa11.12□□□□□ -0.63
NSMCE4A-206ENST00000468209 P2RX7Q99572 595 aaKnown RBP11.12□□□□□ -0.63
NSMCE4A-206ENST00000468209 APBA2Q99767 749 aa11.12□□□□□ -0.63
NSMCE4A-206ENST00000468209 PLXNA1Q9UIW2 1896 aa11.11□□□□□ -0.63
NSMCE4A-206ENST00000468209 TRIM43BA6NCK2 446 aa11.11□□□□□ -0.63
NSMCE4A-206ENST00000468209 IFIT1P09914 478 aaKnown RBP11.11□□□□□ -0.63
NSMCE4A-206ENST00000468209 RGS2P41220 211 aa11.11□□□□□ -0.63
NSMCE4A-206ENST00000468209 IRX3P78415 501 aaPredicted RBP11.11□□□□□ -0.63
NSMCE4A-206ENST00000468209 PDE3AQ14432 1141 aa11.11□□□□□ -0.63
NSMCE4A-206ENST00000468209 Q3C1V9 767 aa11.11□□□□□ -0.63
NSMCE4A-206ENST00000468209 TRIM60Q495X7 471 aa11.11□□□□□ -0.63
NSMCE4A-206ENST00000468209 GPR142Q7Z601 462 aa11.11□□□□□ -0.63
NSMCE4A-206ENST00000468209 TRMT44Q8IYL2 757 aaKnown RBP11.11□□□□□ -0.63
NSMCE4A-206ENST00000468209 KRI1Q8N9T8 703 aaKnown RBP11.11□□□□□ -0.63
NSMCE4A-206ENST00000468209 GPRC5AQ8NFJ5 357 aa11.11□□□□□ -0.63
NSMCE4A-206ENST00000468209 TRIM43Q96BQ3 446 aaPredicted RBP11.11□□□□□ -0.63
NSMCE4A-206ENST00000468209 NECAB3Q96P71 396 aaPredicted RBP11.11□□□□□ -0.63
NSMCE4A-206ENST00000468209 ASB2Q96Q27 587 aa11.11□□□□□ -0.63
NSMCE4A-206ENST00000468209 UHRF1Q96T88 793 aaPredicted RBP11.11□□□□□ -0.63
NSMCE4A-206ENST00000468209 PDLIM7Q9NR12 457 aa11.11□□□□□ -0.63
NSMCE4A-206ENST00000468209 DDX20Q9UHI6 824 aaKnown RBP11.11□□□□□ -0.63
NSMCE4A-206ENST00000468209 XIRP2A4UGR9 3374 aa11.11□□□□□ -0.63
NSMCE4A-206ENST00000468209 GAKO14976 1311 aa11.1□□□□□ -0.63
NSMCE4A-206ENST00000468209 A6NJR5 290 aa11.1□□□□□ -0.63
NSMCE4A-206ENST00000468209 DNM1LO00429 736 aa11.1□□□□□ -0.63
NSMCE4A-206ENST00000468209 ITGB8P26012 769 aa11.1□□□□□ -0.63
NSMCE4A-206ENST00000468209 HERVK_113P62684 666 aa11.1□□□□□ -0.63
NSMCE4A-206ENST00000468209 PDE4DQ08499 809 aa11.1□□□□□ -0.63
NSMCE4A-206ENST00000468209 PABPC4Q13310 644 aaKnown RBP eCLIP11.1□□□□□ -0.63
NSMCE4A-206ENST00000468209 MTMR2Q13614 643 aa11.1□□□□□ -0.63
NSMCE4A-206ENST00000468209 RABL6Q3YEC7 729 aaPredicted RBP11.1□□□□□ -0.63
NSMCE4A-206ENST00000468209 GJC2Q5T442 439 aaPredicted RBP11.1□□□□□ -0.63
NSMCE4A-206ENST00000468209 FOXD4L5Q5VV16 416 aaPredicted RBP11.1□□□□□ -0.63
NSMCE4A-206ENST00000468209 TRPV1Q8NER1 839 aa11.1□□□□□ -0.63
NSMCE4A-206ENST00000468209 FOXD4L4Q8WXT5 416 aaPredicted RBP11.1□□□□□ -0.63
NSMCE4A-206ENST00000468209 RNPC3Q96LT9 517 aaKnown RBP11.1□□□□□ -0.63
NSMCE4A-206ENST00000468209 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.1□□□□□ -0.63
NSMCE4A-206ENST00000468209 RBPJLQ9UBG7 517 aa11.1□□□□□ -0.63
NSMCE4A-206ENST00000468209 SSUH2Q9Y2M2 353 aa11.1□□□□□ -0.63
NSMCE4A-206ENST00000468209 NDUFB9Q9Y6M9 179 aa11.1□□□□□ -0.63
NSMCE4A-206ENST00000468209 CHD7Q9P2D1 2997 aa11.1□□□□□ -0.63
NSMCE4A-206ENST00000468209 FANCIQ9NVI1 1328 aa11.09□□□□□ -0.63
NSMCE4A-206ENST00000468209 VAMP4O75379 141 aa11.09□□□□□ -0.63
NSMCE4A-206ENST00000468209 DNAJB2P25686 324 aa11.09□□□□□ -0.63
NSMCE4A-206ENST00000468209 CNGA1P29973 690 aa11.09□□□□□ -0.63
NSMCE4A-206ENST00000468209 MAPK4P31152 587 aa11.09□□□□□ -0.63
NSMCE4A-206ENST00000468209 ERVK-9P63128 1117 aa11.09□□□□□ -0.63
NSMCE4A-206ENST00000468209 ERVK-24P63145 666 aa11.09□□□□□ -0.63
NSMCE4A-206ENST00000468209 SHROOM1Q2M3G4 852 aaPredicted RBP11.09□□□□□ -0.63
NSMCE4A-206ENST00000468209 SH3D19Q5HYK7 790 aa11.09□□□□□ -0.63
NSMCE4A-206ENST00000468209 SLC4A10Q6U841 1118 aa11.09□□□□□ -0.63
NSMCE4A-206ENST00000468209 SLC39A5Q6ZMH5 540 aa11.09□□□□□ -0.63
NSMCE4A-206ENST00000468209 PLEKHH3Q7Z736 793 aa11.09□□□□□ -0.63
NSMCE4A-206ENST00000468209 ATXN2LQ8WWM7 1075 aaKnown RBP11.09□□□□□ -0.63
NSMCE4A-206ENST00000468209 LPAR1Q92633 364 aa11.09□□□□□ -0.63
NSMCE4A-206ENST00000468209 PAGR1Q9BTK6 254 aa11.09□□□□□ -0.63
NSMCE4A-206ENST00000468209 OSBPL5Q9H0X9 879 aaPredicted RBP11.09□□□□□ -0.63
NSMCE4A-206ENST00000468209 THEGQ9P2T0 379 aa11.09□□□□□ -0.63
NSMCE4A-206ENST00000468209 PIEZO1Q92508 2521 aa11.09□□□□□ -0.63
NSMCE4A-206ENST00000468209 SYNGAP1Q96PV0 1343 aa11.09□□□□□ -0.63
NSMCE4A-206ENST00000468209 ZNF316A6NFI3 1004 aaPredicted RBP11.08□□□□□ -0.64
NSMCE4A-206ENST00000468209 TRIM66O15016 1216 aa11.08□□□□□ -0.64
NSMCE4A-206ENST00000468209 TBC1D12O60347 775 aa11.08□□□□□ -0.64
NSMCE4A-206ENST00000468209 ALDH1L1O75891 902 aa11.08□□□□□ -0.64
NSMCE4A-206ENST00000468209 SLC5A1P13866 664 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms