RNA–Protein interactions for RNA: ENST00000468040.2

SNIP1-202, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 5

Gene SNIP1, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-202ENST00000468040 CAP2P40123 477 aa18■□□□□ 0.47
SNIP1-202ENST00000468040 TSGA10IPQ3SY00 556 aa18■□□□□ 0.47
SNIP1-202ENST00000468040 E7EWF7 191 aa17.99■□□□□ 0.47
SNIP1-202ENST00000468040 ASNSP08243 561 aa17.99■□□□□ 0.47
SNIP1-202ENST00000468040 INPP5BP32019 993 aa17.99■□□□□ 0.47
SNIP1-202ENST00000468040 ABCB5Q2M3G0 1257 aa17.99■□□□□ 0.47
SNIP1-202ENST00000468040 RRP12Q5JTH9 1297 aaKnown RBP17.99■□□□□ 0.47
SNIP1-202ENST00000468040 NOL9Q5SY16 702 aaKnown RBP17.99■□□□□ 0.47
SNIP1-202ENST00000468040 LDLRAD1Q5T700 205 aa17.99■□□□□ 0.47
SNIP1-202ENST00000468040 MOB2Q70IA6 237 aa17.99■□□□□ 0.47
SNIP1-202ENST00000468040 RALYLQ86SE5 291 aaKnown RBP17.99■□□□□ 0.47
SNIP1-202ENST00000468040 SCYL3Q8IZE3 742 aa17.99■□□□□ 0.47
SNIP1-202ENST00000468040 NCOA7Q8NI08 942 aa17.99■□□□□ 0.47
SNIP1-202ENST00000468040 ESR2Q92731 530 aa17.99■□□□□ 0.47
SNIP1-202ENST00000468040 CABP5Q9NP86 173 aa17.99■□□□□ 0.47
SNIP1-202ENST00000468040 NEDD4P46934 1319 aa17.98■□□□□ 0.47
SNIP1-202ENST00000468040 UBE2Q2LH0YL09 131 aa17.98■□□□□ 0.47
SNIP1-202ENST00000468040 RANBP6O60518 1105 aaKnown RBP17.98■□□□□ 0.47
SNIP1-202ENST00000468040 APLP1P51693 650 aa17.98■□□□□ 0.47
SNIP1-202ENST00000468040 VGLL4Q14135 290 aa17.98■□□□□ 0.47
SNIP1-202ENST00000468040 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.98■□□□□ 0.47
SNIP1-202ENST00000468040 TMEM179Q6ZVK1 233 aa17.98■□□□□ 0.47
SNIP1-202ENST00000468040 ZKSCAN4Q969J2 545 aaPredicted RBP17.98■□□□□ 0.47
SNIP1-202ENST00000468040 INCENPQ9NQS7 918 aa17.98■□□□□ 0.47
SNIP1-202ENST00000468040 PICK1Q9NRD5 415 aa17.98■□□□□ 0.47
SNIP1-202ENST00000468040 TACC3Q9Y6A5 838 aa17.98■□□□□ 0.47
SNIP1-202ENST00000468040 TAF6LQ9Y6J9 622 aa17.98■□□□□ 0.47
SNIP1-202ENST00000468040 OTOFQ9HC10 1997 aa17.98■□□□□ 0.47
SNIP1-202ENST00000468040 DOCK1Q14185 1865 aa17.97■□□□□ 0.47
SNIP1-202ENST00000468040 PLIN4Q96Q06 1357 aa17.97■□□□□ 0.47
SNIP1-202ENST00000468040 TSPY2A6NKD2 308 aa17.97■□□□□ 0.47
SNIP1-202ENST00000468040 MPHOSPH10O00566 681 aaKnown RBP17.97■□□□□ 0.47
SNIP1-202ENST00000468040 GDF11O95390 407 aa17.97■□□□□ 0.47
SNIP1-202ENST00000468040 GH2P01242 217 aa17.97■□□□□ 0.47
SNIP1-202ENST00000468040 TSPY3P0CV98 308 aa17.97■□□□□ 0.47
SNIP1-202ENST00000468040 TSPY8P0CW00 308 aa17.97■□□□□ 0.47
SNIP1-202ENST00000468040 AKR1B1P15121 316 aa17.97■□□□□ 0.47
SNIP1-202ENST00000468040 ANAPC15P60006 121 aa17.97■□□□□ 0.47
SNIP1-202ENST00000468040 TFAP4Q01664 338 aa17.97■□□□□ 0.47
SNIP1-202ENST00000468040 RRP1BQ14684 758 aaKnown RBP17.97■□□□□ 0.47
SNIP1-202ENST00000468040 STOX1Q6ZVD7 989 aa17.97■□□□□ 0.47
SNIP1-202ENST00000468040 RASEFQ8IZ41 740 aa17.97■□□□□ 0.47
SNIP1-202ENST00000468040 ZBTB21Q9ULJ3 1066 aa17.97■□□□□ 0.47
SNIP1-202ENST00000468040 SNX14Q9Y5W7 946 aa17.97■□□□□ 0.47
SNIP1-202ENST00000468040 TLL2Q9Y6L7 1015 aa17.97■□□□□ 0.47
SNIP1-202ENST00000468040 B4E1Z4 1266 aa17.96■□□□□ 0.47
SNIP1-202ENST00000468040 HMGB1P09429 215 aaKnown RBP17.96■□□□□ 0.47
SNIP1-202ENST00000468040 HUNKP57058 714 aa17.96■□□□□ 0.47
SNIP1-202ENST00000468040 SAPCD2Q86UD0 394 aa17.96■□□□□ 0.47
SNIP1-202ENST00000468040 NEDD1Q8NHV4 660 aa17.96■□□□□ 0.47
SNIP1-202ENST00000468040 C22orf23Q9BZE7 217 aa17.96■□□□□ 0.47
SNIP1-202ENST00000468040 CREBZFQ9NS37 354 aa17.96■□□□□ 0.47
SNIP1-202ENST00000468040 ABT1Q9ULW3 272 aaKnown RBP17.96■□□□□ 0.47
SNIP1-202ENST00000468040 SNCAIPQ9Y6H5 919 aa17.96■□□□□ 0.47
SNIP1-202ENST00000468040 ATAD5Q96QE3 1844 aa17.95■□□□□ 0.46
SNIP1-202ENST00000468040 KDM4AO75164 1064 aa17.95■□□□□ 0.46
SNIP1-202ENST00000468040 PSMA5P28066 241 aa17.95■□□□□ 0.46
SNIP1-202ENST00000468040 FAM47AQ5JRC9 791 aa17.95■□□□□ 0.46
SNIP1-202ENST00000468040 PPP4R3BQ5MIZ7 849 aa17.95■□□□□ 0.46
SNIP1-202ENST00000468040 IQCA1Q86XH1 822 aa17.95■□□□□ 0.46
SNIP1-202ENST00000468040 HHIPL1Q96JK4 782 aa17.95■□□□□ 0.46
SNIP1-202ENST00000468040 NEK1Q96PY6 1258 aa17.95■□□□□ 0.46
SNIP1-202ENST00000468040 TBC1D2Q9BYX2 928 aa17.95■□□□□ 0.46
SNIP1-202ENST00000468040 PTPRAP18433 802 aa17.94■□□□□ 0.46
SNIP1-202ENST00000468040 RBM25P49756 843 aaKnown RBP17.94■□□□□ 0.46
SNIP1-202ENST00000468040 RAB3GAP1Q15042 981 aa17.94■□□□□ 0.46
SNIP1-202ENST00000468040 SLC10A4Q96EP9 437 aa17.94■□□□□ 0.46
SNIP1-202ENST00000468040 CLMNQ96JQ2 1002 aa17.94■□□□□ 0.46
SNIP1-202ENST00000468040 JAKMIP1Q96N16 626 aaKnown RBP17.94■□□□□ 0.46
SNIP1-202ENST00000468040 KANSL2Q9H9L4 492 aa17.94■□□□□ 0.46
SNIP1-202ENST00000468040 ZSWIM5Q9P217 1185 aa17.94■□□□□ 0.46
SNIP1-202ENST00000468040 SPDYE5A6NIY4 337 aa17.93■□□□□ 0.46
SNIP1-202ENST00000468040 USP17L5A8MUK1 530 aa17.93■□□□□ 0.46
SNIP1-202ENST00000468040 MCM5P33992 734 aa17.93■□□□□ 0.46
SNIP1-202ENST00000468040 JAG1P78504 1218 aa17.93■□□□□ 0.46
SNIP1-202ENST00000468040 SEPT2Q15019 361 aa17.93■□□□□ 0.46
SNIP1-202ENST00000468040 ADCK5Q3MIX3 580 aa17.93■□□□□ 0.46
SNIP1-202ENST00000468040 CCDC178Q5BJE1 867 aa17.93■□□□□ 0.46
SNIP1-202ENST00000468040 ERO1BQ86YB8 467 aa17.93■□□□□ 0.46
SNIP1-202ENST00000468040 MB21D2Q8IYB1 491 aaPredicted RBP17.93■□□□□ 0.46
SNIP1-202ENST00000468040 IL17RAQ96F46 866 aa17.93■□□□□ 0.46
SNIP1-202ENST00000468040 UBAC1Q9BSL1 405 aa17.93■□□□□ 0.46
SNIP1-202ENST00000468040 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.93■□□□□ 0.46
SNIP1-202ENST00000468040 ELP3Q9H9T3 547 aa17.93■□□□□ 0.46
SNIP1-202ENST00000468040 AS3MTQ9HBK9 375 aa17.93■□□□□ 0.46
SNIP1-202ENST00000468040 TCP11L1Q9NUJ3 509 aa17.93■□□□□ 0.46
SNIP1-202ENST00000468040 GREB1LQ9C091 1923 aaPredicted RBP17.93■□□□□ 0.46
SNIP1-202ENST00000468040 IGKV6D-41A0A0C4DH26 115 aa17.92■□□□□ 0.46
SNIP1-202ENST00000468040 GUCY1A2P33402 732 aa17.92■□□□□ 0.46
SNIP1-202ENST00000468040 C1QTNF8P60827 252 aa17.92■□□□□ 0.46
SNIP1-202ENST00000468040 ICA1Q05084 483 aa17.92■□□□□ 0.46
SNIP1-202ENST00000468040 PPATQ06203 517 aa17.92■□□□□ 0.46
SNIP1-202ENST00000468040 SART3Q15020 963 aaKnown RBP17.92■□□□□ 0.46
SNIP1-202ENST00000468040 SHROOM1Q2M3G4 852 aaPredicted RBP17.92■□□□□ 0.46
SNIP1-202ENST00000468040 RGMBQ6NW40 437 aa17.92■□□□□ 0.46
SNIP1-202ENST00000468040 BLOC1S2Q6QNY1 142 aa17.92■□□□□ 0.46
SNIP1-202ENST00000468040 MTA3Q9BTC8 594 aa17.92■□□□□ 0.46
SNIP1-202ENST00000468040 TM6SF1Q9BZW5 370 aa17.92■□□□□ 0.46
SNIP1-202ENST00000468040 WDR19Q8NEZ3 1342 aa17.92■□□□□ 0.46
SNIP1-202ENST00000468040 ZNF157P51786 506 aaPredicted RBP17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms