RNA–Protein interactions for RNA: ENST00000467435.1

HDLBP-231, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 639 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-231ENST00000467435 MRIQ9BWK5 157 aa14.35□□□□□ -0.11
HDLBP-231ENST00000467435 FAM217BQ9NTX9 383 aaPredicted RBP14.35□□□□□ -0.11
HDLBP-231ENST00000467435 FIBPO43427 364 aa14.34□□□□□ -0.11
HDLBP-231ENST00000467435 NMT2O60551 498 aa14.34□□□□□ -0.11
HDLBP-231ENST00000467435 DDAH1O94760 285 aa14.34□□□□□ -0.11
HDLBP-231ENST00000467435 TSPY3P0CV98 308 aa14.34□□□□□ -0.11
HDLBP-231ENST00000467435 TSPY8P0CW00 308 aa14.34□□□□□ -0.11
HDLBP-231ENST00000467435 CALM1P0DP23 149 aa14.34□□□□□ -0.11
HDLBP-231ENST00000467435 CALM2P0DP24 149 aa14.34□□□□□ -0.11
HDLBP-231ENST00000467435 CALM3P0DP25 149 aa14.34□□□□□ -0.11
HDLBP-231ENST00000467435 RBM5P52756 815 aaKnown RBP eCLIP14.34□□□□□ -0.116e-12■■□□□ 13.2
HDLBP-231ENST00000467435 TFAP4Q01664 338 aa14.34□□□□□ -0.11
HDLBP-231ENST00000467435 DNM1Q05193 864 aaKnown RBP14.34□□□□□ -0.11
HDLBP-231ENST00000467435 NTRK3Q16288 839 aa14.34□□□□□ -0.11
HDLBP-231ENST00000467435 TMEM87AQ8NBN3 555 aa14.34□□□□□ -0.11
HDLBP-231ENST00000467435 C8orf76Q96K31 380 aa14.34□□□□□ -0.11
HDLBP-231ENST00000467435 OSBPL5Q9H0X9 879 aaPredicted RBP14.34□□□□□ -0.11
HDLBP-231ENST00000467435 TAOK3Q9H2K8 898 aa14.34□□□□□ -0.11
HDLBP-231ENST00000467435 GDPD2Q9HCC8 539 aa14.34□□□□□ -0.11
HDLBP-231ENST00000467435 DDX4Q9NQI0 724 aaKnown RBP14.34□□□□□ -0.11
HDLBP-231ENST00000467435 SERPINA10Q9UK55 444 aa14.34□□□□□ -0.11
HDLBP-231ENST00000467435 DDX49Q9Y6V7 483 aaKnown RBP14.34□□□□□ -0.11
HDLBP-231ENST00000467435 CCDC196A0A1B0GTZ2 297 aa14.33□□□□□ -0.12
HDLBP-231ENST00000467435 RASA1P20936 1047 aa14.33□□□□□ -0.12
HDLBP-231ENST00000467435 PTGER2P43116 358 aa14.33□□□□□ -0.12
HDLBP-231ENST00000467435 CDK8P49336 464 aa14.33□□□□□ -0.12
HDLBP-231ENST00000467435 KRT85P78386 507 aa14.33□□□□□ -0.12
HDLBP-231ENST00000467435 GUCY1B3Q02153 619 aa14.33□□□□□ -0.12
HDLBP-231ENST00000467435 CSPP1Q1MSJ5 1256 aa14.33□□□□□ -0.12
HDLBP-231ENST00000467435 KLHL40Q2TBA0 621 aa14.33□□□□□ -0.12
HDLBP-231ENST00000467435 CCDC178Q5BJE1 867 aa14.33□□□□□ -0.12
HDLBP-231ENST00000467435 RSBN1LQ6PCB5 846 aaPredicted RBP14.33□□□□□ -0.12
HDLBP-231ENST00000467435 TTC6Q86TZ1 520 aa14.33□□□□□ -0.12
HDLBP-231ENST00000467435 ZNF444Q8N0Y2 327 aaPredicted RBP14.33□□□□□ -0.12
HDLBP-231ENST00000467435 FANCBQ8NB91 859 aa14.33□□□□□ -0.12
HDLBP-231ENST00000467435 PHKBQ93100 1093 aa14.33□□□□□ -0.12
HDLBP-231ENST00000467435 ZSCAN16Q9H4T2 348 aaPredicted RBP14.33□□□□□ -0.12
HDLBP-231ENST00000467435 PCDHAC2Q9Y5I4 1007 aa14.33□□□□□ -0.12
HDLBP-231ENST00000467435 PSMD14O00487 310 aa14.32□□□□□ -0.12
HDLBP-231ENST00000467435 RAD17O75943 681 aa14.32□□□□□ -0.12
HDLBP-231ENST00000467435 FMNL1O95466 1100 aaPredicted RBP14.32□□□□□ -0.12
HDLBP-231ENST00000467435 IFNAR1P17181 557 aa14.32□□□□□ -0.12
HDLBP-231ENST00000467435 SSRP1Q08945 709 aaKnown RBP14.32□□□□□ -0.12
HDLBP-231ENST00000467435 GSE1Q14687 1217 aa14.32□□□□□ -0.12
HDLBP-231ENST00000467435 PPP2R5BQ15173 497 aa14.32□□□□□ -0.12
HDLBP-231ENST00000467435 CFAP100Q494V2 611 aa14.32□□□□□ -0.12
HDLBP-231ENST00000467435 ALG1Q9BT22 464 aa14.32□□□□□ -0.12
HDLBP-231ENST00000467435 SLC26A6Q9BXS9 759 aa14.32□□□□□ -0.12
HDLBP-231ENST00000467435 RBM28Q9NW13 759 aaKnown RBP14.32□□□□□ -0.12
HDLBP-231ENST00000467435 MYH4Q9Y623 1939 aa14.32□□□□□ -0.12
HDLBP-231ENST00000467435 PLIN4Q96Q06 1357 aa14.32□□□□□ -0.12
HDLBP-231ENST00000467435 MBD3O95983 291 aa14.31□□□□□ -0.12
HDLBP-231ENST00000467435 HLA-DOAP06340 250 aa14.31□□□□□ -0.12
HDLBP-231ENST00000467435 NFIAQ12857 509 aa14.31□□□□□ -0.12
HDLBP-231ENST00000467435 RCSD1Q6JBY9 416 aa14.31□□□□□ -0.12
HDLBP-231ENST00000467435 FAM173BQ6P4H8 233 aa14.31□□□□□ -0.12
HDLBP-231ENST00000467435 USP48Q86UV5 1035 aa14.31□□□□□ -0.12
HDLBP-231ENST00000467435 DGKHQ86XP1 1220 aa14.31□□□□□ -0.12
HDLBP-231ENST00000467435 TRIM22Q8IYM9 498 aa14.31□□□□□ -0.12
HDLBP-231ENST00000467435 RGS22Q8NE09 1264 aa14.31□□□□□ -0.12
HDLBP-231ENST00000467435 GZF1Q9H116 711 aaPredicted RBP14.31□□□□□ -0.12
HDLBP-231ENST00000467435 KAT14Q9H8E8 782 aa14.31□□□□□ -0.12
HDLBP-231ENST00000467435 IL17RBQ9NRM6 502 aa14.31□□□□□ -0.12
HDLBP-231ENST00000467435 TCP11L1Q9NUJ3 509 aa14.31□□□□□ -0.12
HDLBP-231ENST00000467435 ZNRF3Q9ULT6 936 aa14.31□□□□□ -0.12
HDLBP-231ENST00000467435 BCS1LQ9Y276 419 aa14.31□□□□□ -0.12
HDLBP-231ENST00000467435 COL2A1P02458 1487 aaPredicted RBP14.31□□□□□ -0.12
HDLBP-231ENST00000467435 VIL1P09327 827 aaKnown RBP14.3□□□□□ -0.12
HDLBP-231ENST00000467435 CACNB3P54284 484 aa14.3□□□□□ -0.12
HDLBP-231ENST00000467435 GABPAQ06546 454 aa14.3□□□□□ -0.12
HDLBP-231ENST00000467435 TROAPQ12815 778 aa14.3□□□□□ -0.12
HDLBP-231ENST00000467435 OTUD7BQ6GQQ9 843 aa14.3□□□□□ -0.12
HDLBP-231ENST00000467435 NBPF11Q86T75 865 aa14.3□□□□□ -0.12
HDLBP-231ENST00000467435 FBXO18Q8NFZ0 1043 aa14.3□□□□□ -0.12
HDLBP-231ENST00000467435 NEDD1Q8NHV4 660 aa14.3□□□□□ -0.12
HDLBP-231ENST00000467435 CTCFLQ8NI51 663 aaPredicted RBP14.3□□□□□ -0.12
HDLBP-231ENST00000467435 GPT2Q8TD30 523 aa14.3□□□□□ -0.12
HDLBP-231ENST00000467435 WASF1Q92558 559 aa14.3□□□□□ -0.12
HDLBP-231ENST00000467435 ANKS1AQ92625 1134 aa14.3□□□□□ -0.12
HDLBP-231ENST00000467435 AIFM3Q96NN9 605 aa14.3□□□□□ -0.12
HDLBP-231ENST00000467435 IDI2Q9BXS1 227 aa14.3□□□□□ -0.12
HDLBP-231ENST00000467435 SWAP70Q9UH65 585 aa14.3□□□□□ -0.12
HDLBP-231ENST00000467435 HDAC9Q9UKV0 1011 aa14.3□□□□□ -0.12
HDLBP-231ENST00000467435 DICER1Q9UPY3 1922 aaKnown RBP14.29□□□□□ -0.12
HDLBP-231ENST00000467435 NFKBIEO00221 500 aa14.29□□□□□ -0.12
HDLBP-231ENST00000467435 TRIM29Q14134 588 aa14.29□□□□□ -0.12
HDLBP-231ENST00000467435 CMTR1Q8N1G2 835 aaKnown RBP14.29□□□□□ -0.12
HDLBP-231ENST00000467435 GMLQ99445 158 aa14.29□□□□□ -0.12
HDLBP-231ENST00000467435 EHD4Q9H223 541 aa14.29□□□□□ -0.12
HDLBP-231ENST00000467435 FAM198AQ9UFP1 575 aa14.29□□□□□ -0.12
HDLBP-231ENST00000467435 SERPINB13Q9UIV8 391 aa14.29□□□□□ -0.12
HDLBP-231ENST00000467435 GADD45BO75293 160 aaPredicted RBP14.28□□□□□ -0.12
HDLBP-231ENST00000467435 NPM3O75607 178 aaKnown RBP14.28□□□□□ -0.12
HDLBP-231ENST00000467435 ELP1O95163 1332 aa14.28□□□□□ -0.12
HDLBP-231ENST00000467435 PLEKHA8P1O95397 391 aa14.28□□□□□ -0.12
HDLBP-231ENST00000467435 DEXIO95424 95 aa14.28□□□□□ -0.12
HDLBP-231ENST00000467435 TCP10Q12799 353 aa14.28□□□□□ -0.12
HDLBP-231ENST00000467435 KRT40Q6A162 431 aa14.28□□□□□ -0.12
HDLBP-231ENST00000467435 TMTC3Q6ZXV5 915 aa14.28□□□□□ -0.12
HDLBP-231ENST00000467435 CRACR2BQ8N4Y2 399 aaPredicted RBP14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms