RNA–Protein interactions for RNA: ENST00000467246.5

HPS1-208, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 1 (best)

Gene HPS1, Length 2,791 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-208ENST00000467246 LEMD3Q9Y2U8 911 aa13.2□□□□□ -0.3
HPS1-208ENST00000467246 FUT2Q10981 343 aa13.19□□□□□ -0.3
HPS1-208ENST00000467246 CATIPQ7Z7H3 387 aa13.19□□□□□ -0.3
HPS1-208ENST00000467246 JMYQ8N9B5 988 aa13.19□□□□□ -0.3
HPS1-208ENST00000467246 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.19□□□□□ -0.3
HPS1-208ENST00000467246 XDHP47989 1333 aa13.19□□□□□ -0.3
HPS1-208ENST00000467246 BIN1O00499 593 aa13.19□□□□□ -0.3
HPS1-208ENST00000467246 SLC3A2P08195 630 aaKnown RBP13.19□□□□□ -0.3
HPS1-208ENST00000467246 USP17L8P0C7I0 530 aa13.19□□□□□ -0.3
HPS1-208ENST00000467246 PCP11498 1178 aaKnown RBP13.19□□□□□ -0.3
HPS1-208ENST00000467246 ADRA2BP18089 450 aa13.19□□□□□ -0.3
HPS1-208ENST00000467246 PTGS1P23219 599 aa13.19□□□□□ -0.3
HPS1-208ENST00000467246 SYKP43405 635 aa13.19□□□□□ -0.3
HPS1-208ENST00000467246 DIXDC1Q155Q3 683 aa13.19□□□□□ -0.3
HPS1-208ENST00000467246 PKN1Q16512 942 aa13.19□□□□□ -0.3
HPS1-208ENST00000467246 DPCR1Q3MIW9 517 aa13.19□□□□□ -0.3
HPS1-208ENST00000467246 DRC7Q8IY82 874 aa13.19□□□□□ -0.3
HPS1-208ENST00000467246 PIBF1Q8WXW3 757 aa13.19□□□□□ -0.3
HPS1-208ENST00000467246 RPGRQ92834 1020 aaKnown RBP13.19□□□□□ -0.3
HPS1-208ENST00000467246 RNF26Q9BY78 433 aaPredicted RBP13.19□□□□□ -0.3
HPS1-208ENST00000467246 MCM9Q9NXL9 1143 aa13.19□□□□□ -0.3
HPS1-208ENST00000467246 BECN2A8MW95 431 aa13.18□□□□□ -0.3
HPS1-208ENST00000467246 ORC4O43929 436 aa13.18□□□□□ -0.3
HPS1-208ENST00000467246 SERPINB2P05120 415 aa13.18□□□□□ -0.3
HPS1-208ENST00000467246 LDHBP07195 334 aaKnown RBP13.18□□□□□ -0.3
HPS1-208ENST00000467246 TPM2P07951 284 aa13.18□□□□□ -0.3
HPS1-208ENST00000467246 GPSM2P81274 684 aa13.18□□□□□ -0.3
HPS1-208ENST00000467246 SPTY2D1Q68D10 685 aaPredicted RBP13.18□□□□□ -0.3
HPS1-208ENST00000467246 CEP57L1Q8IYX8 460 aa13.18□□□□□ -0.3
HPS1-208ENST00000467246 FOXP1Q9H334 677 aaPredicted RBP13.18□□□□□ -0.3
HPS1-208ENST00000467246 VPS54Q9P1Q0 977 aa13.18□□□□□ -0.3
HPS1-208ENST00000467246 HPSEQ9Y251 543 aa13.18□□□□□ -0.3
HPS1-208ENST00000467246 V9GY48 417 aaPredicted RBP13.18□□□□□ -0.3
HPS1-208ENST00000467246 GOLGA6L6A8MZA4 724 aa13.18□□□□□ -0.3
HPS1-208ENST00000467246 PPP2R5BQ15173 497 aa13.18□□□□□ -0.3
HPS1-208ENST00000467246 SPECC1Q5M775 1068 aa13.18□□□□□ -0.3
HPS1-208ENST00000467246 CCDC186Q7Z3E2 898 aa13.18□□□□□ -0.3
HPS1-208ENST00000467246 AOPEPQ8N6M6 819 aa13.18□□□□□ -0.3
HPS1-208ENST00000467246 WDR66Q8TBY9 1149 aa13.18□□□□□ -0.3
HPS1-208ENST00000467246 QTRT2Q9H974 415 aaKnown RBP13.18□□□□□ -0.3
HPS1-208ENST00000467246 ARPP21Q9UBL0 812 aaPredicted RBP13.18□□□□□ -0.3
HPS1-208ENST00000467246 PYCARDQ9ULZ3 195 aa13.18□□□□□ -0.3
HPS1-208ENST00000467246 AKAP17AQ02040 695 aaKnown RBP13.17□□□□□ -0.3
HPS1-208ENST00000467246 GRIN1Q05586 938 aa13.17□□□□□ -0.3
HPS1-208ENST00000467246 NOLC1Q14978 699 aaKnown RBP eCLIP13.17□□□□□ -0.3
HPS1-208ENST00000467246 SBK1Q52WX2 424 aa13.17□□□□□ -0.3
HPS1-208ENST00000467246 RESP18Q5W5W9 173 aa13.17□□□□□ -0.3
HPS1-208ENST00000467246 SH3RF3Q8TEJ3 882 aaPredicted RBP13.17□□□□□ -0.3
HPS1-208ENST00000467246 PCDHB6Q9Y5E3 794 aa13.17□□□□□ -0.3
HPS1-208ENST00000467246 TRIM37O94972 964 aa13.17□□□□□ -0.3
HPS1-208ENST00000467246 ATP2B1P20020 1258 aa13.17□□□□□ -0.3
HPS1-208ENST00000467246 CRY2Q49AN0 593 aa13.17□□□□□ -0.3
HPS1-208ENST00000467246 ISM2Q6H9L7 571 aa13.17□□□□□ -0.3
HPS1-208ENST00000467246 CERKQ8TCT0 537 aa13.17□□□□□ -0.3
HPS1-208ENST00000467246 CABP5Q9NP86 173 aa13.17□□□□□ -0.3
HPS1-208ENST00000467246 MKRN1Q9UHC7 482 aaKnown RBP13.17□□□□□ -0.3
HPS1-208ENST00000467246 CUTAO60888 179 aa13.16□□□□□ -0.3
HPS1-208ENST00000467246 ZNF804AQ7Z570 1209 aa13.16□□□□□ -0.3
HPS1-208ENST00000467246 UQCRHLA0A096LP55 91 aa13.16□□□□□ -0.3
HPS1-208ENST00000467246 FAM237AA0A1B0GTK4 181 aa13.16□□□□□ -0.3
HPS1-208ENST00000467246 FAM205CA6NFA0 338 aa13.16□□□□□ -0.3
HPS1-208ENST00000467246 TSPY2A6NKD2 308 aa13.16□□□□□ -0.3
HPS1-208ENST00000467246 PRPF3O43395 683 aaKnown RBP13.16□□□□□ -0.3
HPS1-208ENST00000467246 UFL1O94874 794 aa13.16□□□□□ -0.3
HPS1-208ENST00000467246 TPM3P06753 285 aa13.16□□□□□ -0.3
HPS1-208ENST00000467246 UQCRHP07919 91 aa13.16□□□□□ -0.3
HPS1-208ENST00000467246 USP5P45974 858 aa13.16□□□□□ -0.3
HPS1-208ENST00000467246 PDE4BQ07343 736 aa13.16□□□□□ -0.3
HPS1-208ENST00000467246 ZRSR1Q15695 479 aaKnown RBP13.16□□□□□ -0.3
HPS1-208ENST00000467246 RILPL1Q5EBL4 403 aa13.16□□□□□ -0.3
HPS1-208ENST00000467246 SARM1Q6SZW1 724 aa13.16□□□□□ -0.3
HPS1-208ENST00000467246 KRI1Q8N9T8 703 aaKnown RBP13.16□□□□□ -0.3
HPS1-208ENST00000467246 DYNLL2Q96FJ2 89 aa13.16□□□□□ -0.3
HPS1-208ENST00000467246 TIGD1Q96MW7 591 aa13.16□□□□□ -0.3
HPS1-208ENST00000467246 NAT10Q9H0A0 1025 aaKnown RBP13.16□□□□□ -0.3
HPS1-208ENST00000467246 CLIP2Q9UDT6 1046 aa13.16□□□□□ -0.3
HPS1-208ENST00000467246 ZBTB22O15209 634 aa13.15□□□□□ -0.3
HPS1-208ENST00000467246 DDR1Q08345 913 aa13.15□□□□□ -0.3
HPS1-208ENST00000467246 LRMPQ12912 555 aa13.15□□□□□ -0.3
HPS1-208ENST00000467246 LONRF3Q496Y0 759 aa13.15□□□□□ -0.3
HPS1-208ENST00000467246 TMTC3Q6ZXV5 915 aa13.15□□□□□ -0.3
HPS1-208ENST00000467246 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.15□□□□□ -0.3
HPS1-208ENST00000467246 KIAA1524Q8TCG1 905 aa13.15□□□□□ -0.3
HPS1-208ENST00000467246 RBM28Q9NW13 759 aaKnown RBP13.15□□□□□ -0.3
HPS1-208ENST00000467246 DDAH1O94760 285 aa13.15□□□□□ -0.3
HPS1-208ENST00000467246 CALM1P0DP23 149 aa13.15□□□□□ -0.3
HPS1-208ENST00000467246 CALM2P0DP24 149 aa13.15□□□□□ -0.3
HPS1-208ENST00000467246 CALM3P0DP25 149 aa13.15□□□□□ -0.3
HPS1-208ENST00000467246 ST5P78524 1137 aa13.15□□□□□ -0.3
HPS1-208ENST00000467246 CCDC144BQ3MJ40 725 aa13.15□□□□□ -0.3
HPS1-208ENST00000467246 EARS2Q5JPH6 523 aaKnown RBP13.15□□□□□ -0.3
HPS1-208ENST00000467246 C12orf60Q5U649 245 aa13.15□□□□□ -0.3
HPS1-208ENST00000467246 RCSD1Q6JBY9 416 aa13.15□□□□□ -0.3
HPS1-208ENST00000467246 SRBD1Q8N5C6 995 aaKnown RBP13.15□□□□□ -0.3
HPS1-208ENST00000467246 CD209Q9NNX6 404 aa13.15□□□□□ -0.3
HPS1-208ENST00000467246 KCNH3Q9ULD8 1083 aa13.15□□□□□ -0.3
HPS1-208ENST00000467246 NLRP12P59046 1061 aa13.15□□□□□ -0.31
HPS1-208ENST00000467246 RBM6P78332 1123 aaKnown RBP13.15□□□□□ -0.31
HPS1-208ENST00000467246 PNOCQ13519 176 aa13.15□□□□□ -0.31
HPS1-208ENST00000467246 TMED8Q6PL24 325 aaPredicted RBP13.15□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms