RNA–Protein interactions for RNA: ENST00000466471.1

SORT1-202, Transcript of sortilin 1, humanhuman

TSL 2

Gene SORT1, Length 521 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-202ENST00000466471 C12orf49Q9H741 205 aa4.42□□□□□ -1.7
SORT1-202ENST00000466471 SRA1Q9HD15 236 aaKnown RBP4.42□□□□□ -1.7
SORT1-202ENST00000466471 RNF181Q9P0P0 153 aa4.42□□□□□ -1.7
SORT1-202ENST00000466471 FAM8A1Q9UBU6 413 aa4.42□□□□□ -1.7
SORT1-202ENST00000466471 POLIQ9UNA4 740 aa4.42□□□□□ -1.7
SORT1-202ENST00000466471 IQSEC3Q9UPP2 1182 aaPredicted RBP4.42□□□□□ -1.7
SORT1-202ENST00000466471 SBNO2Q9Y2G9 1366 aa4.41□□□□□ -1.7
SORT1-202ENST00000466471 PRUNE2Q8WUY3 3088 aa4.41□□□□□ -1.7
SORT1-202ENST00000466471 SERTM1A2A2V5 107 aa4.41□□□□□ -1.7
SORT1-202ENST00000466471 GLTPD2A6NH11 291 aa4.41□□□□□ -1.7
SORT1-202ENST00000466471 K7ELQ4 463 aaPredicted RBP4.41□□□□□ -1.7
SORT1-202ENST00000466471 EML1O00423 815 aa4.41□□□□□ -1.7
SORT1-202ENST00000466471 EIF1AYO14602 144 aaKnown RBP4.41□□□□□ -1.7
SORT1-202ENST00000466471 ENPP3O14638 875 aa4.41□□□□□ -1.7
SORT1-202ENST00000466471 FURINP09958 794 aa4.41□□□□□ -1.7
SORT1-202ENST00000466471 ATF4P18848 351 aaPredicted RBP4.41□□□□□ -1.7
SORT1-202ENST00000466471 IBSPP21815 317 aaPredicted RBP4.41□□□□□ -1.7
SORT1-202ENST00000466471 COL8A1P27658 744 aa4.41□□□□□ -1.7
SORT1-202ENST00000466471 PLA2G5P39877 138 aa4.41□□□□□ -1.7
SORT1-202ENST00000466471 PWP1Q13610 501 aa4.41□□□□□ -1.7
SORT1-202ENST00000466471 COL9A2Q14055 689 aaPredicted RBP4.41□□□□□ -1.7
SORT1-202ENST00000466471 TAF1CQ15572 869 aaPredicted RBP4.41□□□□□ -1.7
SORT1-202ENST00000466471 TMEM214Q6NUQ4 689 aaKnown RBP4.41□□□□□ -1.7
SORT1-202ENST00000466471 ARHGAP27Q6ZUM4 889 aa4.41□□□□□ -1.7
SORT1-202ENST00000466471 LRP10Q7Z4F1 713 aa4.41□□□□□ -1.7
SORT1-202ENST00000466471 MCF2L2Q86YR7 1114 aa4.41□□□□□ -1.7
SORT1-202ENST00000466471 CKAP2LQ8IYA6 745 aa4.41□□□□□ -1.7
SORT1-202ENST00000466471 ANKRD24Q8TF21 1146 aa4.41□□□□□ -1.7
SORT1-202ENST00000466471 EDARADDQ8WWZ3 215 aa4.41□□□□□ -1.7
SORT1-202ENST00000466471 KCNB2Q92953 911 aa4.41□□□□□ -1.7
SORT1-202ENST00000466471 ZSCAN10Q96SZ4 725 aaPredicted RBP4.41□□□□□ -1.7
SORT1-202ENST00000466471 CHMP4AQ9BY43 222 aa4.41□□□□□ -1.7
SORT1-202ENST00000466471 PRDM6Q9NQX0 595 aa4.41□□□□□ -1.7
SORT1-202ENST00000466471 SERTAD1Q9UHV2 236 aa4.41□□□□□ -1.7
SORT1-202ENST00000466471 MKL2Q9ULH7 1088 aa4.41□□□□□ -1.7
SORT1-202ENST00000466471 STRIP2Q9ULQ0 834 aa4.41□□□□□ -1.7
SORT1-202ENST00000466471 PHF24Q9UPV7 400 aa4.41□□□□□ -1.7
SORT1-202ENST00000466471 HRH3Q9Y5N1 445 aa4.41□□□□□ -1.7
SORT1-202ENST00000466471 SCN4AP35499 1836 aa4.41□□□□□ -1.7
SORT1-202ENST00000466471 WDR33Q9C0J8 1336 aaKnown RBP4.41□□□□□ -1.7
SORT1-202ENST00000466471 RGPD5Q99666 1765 aa4.4□□□□□ -1.7
SORT1-202ENST00000466471 ANKRD50Q9ULJ7 1429 aa4.4□□□□□ -1.7
SORT1-202ENST00000466471 A0A1B0GTH6 734 aa4.4□□□□□ -1.71
SORT1-202ENST00000466471 C2CD2LO14523 706 aa4.4□□□□□ -1.71
SORT1-202ENST00000466471 CA12O43570 354 aa4.4□□□□□ -1.71
SORT1-202ENST00000466471 STAU1O95793 577 aaKnown RBP4.4□□□□□ -1.71
SORT1-202ENST00000466471 HSPA5P11021 654 aaKnown RBP4.4□□□□□ -1.71
SORT1-202ENST00000466471 XRCC5P13010 732 aaKnown RBP4.4□□□□□ -1.71
SORT1-202ENST00000466471 AMPD1P23109 780 aa4.4□□□□□ -1.71
SORT1-202ENST00000466471 MSX1P28360 303 aa4.4□□□□□ -1.71
SORT1-202ENST00000466471 NOS2P35228 1153 aa4.4□□□□□ -1.71
SORT1-202ENST00000466471 RACK1P63244 317 aaKnown RBP4.4□□□□□ -1.71
SORT1-202ENST00000466471 C4orf17Q53FE4 359 aa4.4□□□□□ -1.71
SORT1-202ENST00000466471 GNASQ5JWF2 1037 aa4.4□□□□□ -1.71
SORT1-202ENST00000466471 IER5Q5VY09 327 aa4.4□□□□□ -1.71
SORT1-202ENST00000466471 ERMP1Q7Z2K6 904 aa4.4□□□□□ -1.71
SORT1-202ENST00000466471 WAPLQ7Z5K2 1190 aa4.4□□□□□ -1.71
SORT1-202ENST00000466471 ALDH16A1Q8IZ83 802 aa4.4□□□□□ -1.71
SORT1-202ENST00000466471 EDEM1Q92611 657 aa4.4□□□□□ -1.71
SORT1-202ENST00000466471 ABHD17AQ96GS6 310 aa4.4□□□□□ -1.71
SORT1-202ENST00000466471 NOC4LQ9BVI4 516 aaKnown RBP4.4□□□□□ -1.71
SORT1-202ENST00000466471 SUV39H2Q9H5I1 410 aa4.4□□□□□ -1.71
SORT1-202ENST00000466471 ZSWIM4Q9H7M6 989 aa4.4□□□□□ -1.71
SORT1-202ENST00000466471 C11orf16Q9NQ32 467 aa4.4□□□□□ -1.71
SORT1-202ENST00000466471 BCS1LQ9Y276 419 aa4.4□□□□□ -1.71
SORT1-202ENST00000466471 PRKAB1Q9Y478 270 aa4.4□□□□□ -1.71
SORT1-202ENST00000466471 TRPM7Q96QT4 1865 aa4.4□□□□□ -1.71
SORT1-202ENST00000466471 C4BP0C0L5 1744 aa4.4□□□□□ -1.71
SORT1-202ENST00000466471 NCOR1O75376 2440 aa4.4□□□□□ -1.71
SORT1-202ENST00000466471 ROCK2O75116 1388 aaKnown RBP4.4□□□□□ -1.71
SORT1-202ENST00000466471 ROCK1Q13464 1354 aa4.4□□□□□ -1.71
SORT1-202ENST00000466471 KIAA0100Q14667 2235 aaKnown RBP4.4□□□□□ -1.71
SORT1-202ENST00000466471 ZBTB39O15060 712 aa4.39□□□□□ -1.71
SORT1-202ENST00000466471 RLBP1P12271 317 aa4.39□□□□□ -1.71
SORT1-202ENST00000466471 BMP4P12644 408 aa4.39□□□□□ -1.71
SORT1-202ENST00000466471 GTF2E1P29083 439 aaPredicted RBP4.39□□□□□ -1.71
SORT1-202ENST00000466471 TNNI2P48788 182 aa4.39□□□□□ -1.71
SORT1-202ENST00000466471 TGFB2P61812 414 aa4.39□□□□□ -1.71
SORT1-202ENST00000466471 IGBP1P78318 339 aa4.39□□□□□ -1.71
SORT1-202ENST00000466471 CTBSQ01459 385 aa4.39□□□□□ -1.71
SORT1-202ENST00000466471 DNM1Q05193 864 aaKnown RBP4.39□□□□□ -1.71
SORT1-202ENST00000466471 SERINC3Q13530 473 aa4.39□□□□□ -1.71
SORT1-202ENST00000466471 UBAP2LQ14157 1087 aaKnown RBP4.39□□□□□ -1.71
SORT1-202ENST00000466471 GRIN2CQ14957 1233 aa4.39□□□□□ -1.71
SORT1-202ENST00000466471 TLR1Q15399 786 aa4.39□□□□□ -1.71
SORT1-202ENST00000466471 RNF187Q5TA31 235 aaPredicted RBP4.39□□□□□ -1.71
SORT1-202ENST00000466471 PDE12Q6L8Q7 609 aaKnown RBP4.39□□□□□ -1.71
SORT1-202ENST00000466471 ETFBKMTQ8IXQ9 262 aa4.39□□□□□ -1.71
SORT1-202ENST00000466471 FAM43AQ8N2R8 423 aa4.39□□□□□ -1.71
SORT1-202ENST00000466471 PGBD3Q8N328 593 aa4.39□□□□□ -1.71
SORT1-202ENST00000466471 SNX29Q8TEQ0 813 aa4.39□□□□□ -1.71
SORT1-202ENST00000466471 PNISRQ8TF01 805 aaKnown RBP4.39□□□□□ -1.71
SORT1-202ENST00000466471 GPRASP2Q96D09 838 aa4.39□□□□□ -1.71
SORT1-202ENST00000466471 IFT43Q96FT9 208 aa4.39□□□□□ -1.71
SORT1-202ENST00000466471 MRFAP1L1Q96HT8 127 aa4.39□□□□□ -1.71
SORT1-202ENST00000466471 SPACA7Q96KW9 195 aa4.39□□□□□ -1.71
SORT1-202ENST00000466471 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.39□□□□□ -1.716e-6■■■■□ 21.1
SORT1-202ENST00000466471 SIRPGQ9P1W8 387 aa4.39□□□□□ -1.71
SORT1-202ENST00000466471 GGT7Q9UJ14 662 aa4.39□□□□□ -1.71
SORT1-202ENST00000466471 GGA1Q9UJY5 639 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms