RNA–Protein interactions for RNA: ENST00000466274.1

NCL-208, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 671 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-208ENST00000466274 JDP2Q8WYK2 163 aa8.12□□□□□ -1.11
NCL-208ENST00000466274 GSX2Q9BZM3 304 aa8.12□□□□□ -1.11
NCL-208ENST00000466274 SLC6A14Q9UN76 642 aa8.12□□□□□ -1.11
NCL-208ENST00000466274 ZNF541Q9H0D2 1346 aa8.11□□□□□ -1.11
NCL-208ENST00000466274 CELF2O95319 508 aaKnown RBP8.11□□□□□ -1.11
NCL-208ENST00000466274 EIF6P56537 245 aaKnown RBP8.11□□□□□ -1.11
NCL-208ENST00000466274 NKAPLQ5M9Q1 402 aa8.11□□□□□ -1.11
NCL-208ENST00000466274 PRPF40BQ6NWY9 871 aaKnown RBP8.11□□□□□ -1.11
NCL-208ENST00000466274 INTS5Q6P9B9 1019 aaKnown RBP8.11□□□□□ -1.11
NCL-208ENST00000466274 MASTLQ96GX5 879 aa8.11□□□□□ -1.11
NCL-208ENST00000466274 CALR3Q96L12 384 aaKnown RBP8.11□□□□□ -1.11
NCL-208ENST00000466274 PPP1R12CQ9BZL4 782 aa8.11□□□□□ -1.11
NCL-208ENST00000466274 DMGDHQ9UI17 866 aaKnown RBP8.11□□□□□ -1.11
NCL-208ENST00000466274 TIAM2Q8IVF5 1701 aa8.11□□□□□ -1.11
NCL-208ENST00000466274 TONSLQ96HA7 1378 aa8.1□□□□□ -1.11
NCL-208ENST00000466274 SOS1Q07889 1333 aaPredicted RBP8.1□□□□□ -1.11
NCL-208ENST00000466274 FZD9O00144 591 aa8.1□□□□□ -1.11
NCL-208ENST00000466274 RTN1Q16799 776 aa8.1□□□□□ -1.11
NCL-208ENST00000466274 JPH1Q9HDC5 661 aaPredicted RBP8.1□□□□□ -1.11
NCL-208ENST00000466274 ZNF277Q9NRM2 450 aaPredicted RBP8.1□□□□□ -1.11
NCL-208ENST00000466274 DNAJB12Q9NXW2 375 aaKnown RBP8.1□□□□□ -1.11
NCL-208ENST00000466274 MAP2P11137 1827 aaKnown RBP8.1□□□□□ -1.11
NCL-208ENST00000466274 MON2Q7Z3U7 1717 aa8.09□□□□□ -1.11
NCL-208ENST00000466274 A0A087WZG4 1122 aa8.09□□□□□ -1.11
NCL-208ENST00000466274 TRAF5O00463 557 aa8.09□□□□□ -1.11
NCL-208ENST00000466274 ST5P78524 1137 aa8.09□□□□□ -1.11
NCL-208ENST00000466274 HIF1AQ16665 826 aa8.09□□□□□ -1.11
NCL-208ENST00000466274 PNMA5Q96PV4 448 aa8.09□□□□□ -1.11
NCL-208ENST00000466274 NACC1Q96RE7 527 aa8.09□□□□□ -1.11
NCL-208ENST00000466274 KLK14Q9P0G3 267 aa8.09□□□□□ -1.11
NCL-208ENST00000466274 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.09□□□□□ -1.11
NCL-208ENST00000466274 THSD7BQ9C0I4 1608 aa8.09□□□□□ -1.11
NCL-208ENST00000466274 A0A0A0MRY4 1105 aa8.08□□□□□ -1.12
NCL-208ENST00000466274 ST20-MTHFSA0A0A6YYL1 179 aa8.08□□□□□ -1.12
NCL-208ENST00000466274 TGFBR3LH3BV60 316 aa8.08□□□□□ -1.12
NCL-208ENST00000466274 PPM1GO15355 546 aaPredicted RBP8.08□□□□□ -1.12
NCL-208ENST00000466274 SRGNP10124 158 aa8.08□□□□□ -1.12
NCL-208ENST00000466274 NFKB1P19838 968 aa8.08□□□□□ -1.12
NCL-208ENST00000466274 GRNP28799 593 aaKnown RBP8.08□□□□□ -1.12
NCL-208ENST00000466274 IARSP41252 1262 aaKnown RBP8.08□□□□□ -1.12
NCL-208ENST00000466274 MTHFSP49914 203 aa8.08□□□□□ -1.12
NCL-208ENST00000466274 FMR1Q06787 632 aaKnown RBP eCLIP8.08□□□□□ -1.128e-13■■■□□ 15.3
NCL-208ENST00000466274 CCINQ13939 588 aa8.08□□□□□ -1.12
NCL-208ENST00000466274 PLEKHO1Q53GL0 409 aaPredicted RBP8.08□□□□□ -1.12
NCL-208ENST00000466274 ZMYM1Q5SVZ6 1142 aa8.08□□□□□ -1.12
NCL-208ENST00000466274 IER5Q5VY09 327 aa8.08□□□□□ -1.12
NCL-208ENST00000466274 PSAPL1Q6NUJ1 521 aa8.08□□□□□ -1.12
NCL-208ENST00000466274 ANKMY2Q8IV38 441 aa8.08□□□□□ -1.12
NCL-208ENST00000466274 GGNBP2Q9H3C7 697 aa8.08□□□□□ -1.12
NCL-208ENST00000466274 HDAC9Q9UKV0 1011 aa8.08□□□□□ -1.12
NCL-208ENST00000466274 USP17L15C9J2P7 530 aa8.07□□□□□ -1.12
NCL-208ENST00000466274 USP17L10C9JJH3 530 aa8.07□□□□□ -1.12
NCL-208ENST00000466274 USP17L13C9JLJ4 530 aa8.07□□□□□ -1.12
NCL-208ENST00000466274 USP17L12C9JPN9 530 aa8.07□□□□□ -1.12
NCL-208ENST00000466274 USP17L11C9JVI0 530 aa8.07□□□□□ -1.12
NCL-208ENST00000466274 USP17L21D6R901 530 aa8.07□□□□□ -1.12
NCL-208ENST00000466274 USP17L18D6R9N7 530 aa8.07□□□□□ -1.12
NCL-208ENST00000466274 USP17L22D6RA61 530 aa8.07□□□□□ -1.12
NCL-208ENST00000466274 USP17L17D6RBQ6 530 aa8.07□□□□□ -1.12
NCL-208ENST00000466274 USP17L19D6RCP7 530 aa8.07□□□□□ -1.12
NCL-208ENST00000466274 USP17L20D6RJB6 530 aa8.07□□□□□ -1.12
NCL-208ENST00000466274 FYB1O15117 783 aa8.07□□□□□ -1.12
NCL-208ENST00000466274 TRPA1O75762 1119 aa8.07□□□□□ -1.12
NCL-208ENST00000466274 SELPP16109 830 aa8.07□□□□□ -1.12
NCL-208ENST00000466274 IGFBP4P22692 258 aa8.07□□□□□ -1.12
NCL-208ENST00000466274 USP17L24Q0WX57 530 aa8.07□□□□□ -1.12
NCL-208ENST00000466274 AMOTQ4VCS5 1084 aa8.07□□□□□ -1.12
NCL-208ENST00000466274 C1orf141Q5JVX7 400 aa8.07□□□□□ -1.12
NCL-208ENST00000466274 NPM2Q86SE8 214 aaKnown RBP8.07□□□□□ -1.12
NCL-208ENST00000466274 CNBD1Q8NA66 436 aa8.07□□□□□ -1.12
NCL-208ENST00000466274 VRTNQ9H8Y1 702 aa8.07□□□□□ -1.12
NCL-208ENST00000466274 ZNF408Q9H9D4 720 aa8.07□□□□□ -1.12
NCL-208ENST00000466274 NAGPAQ9UK23 515 aa8.07□□□□□ -1.12
NCL-208ENST00000466274 SCN4AP35499 1836 aa8.07□□□□□ -1.12
NCL-208ENST00000466274 COL15A1P39059 1388 aa8.07□□□□□ -1.12
NCL-208ENST00000466274 CARMIL3Q8ND23 1372 aa8.07□□□□□ -1.12
NCL-208ENST00000466274 LTBP1Q14766 1721 aa8.06□□□□□ -1.12
NCL-208ENST00000466274 EPS15P42566 896 aa8.06□□□□□ -1.12
NCL-208ENST00000466274 AFF1P51825 1210 aaKnown RBP8.06□□□□□ -1.12
NCL-208ENST00000466274 HUNKP57058 714 aa8.06□□□□□ -1.12
NCL-208ENST00000466274 FOXD4L6Q3SYB3 417 aaPredicted RBP8.06□□□□□ -1.12
NCL-208ENST00000466274 PRR5LQ6MZQ0 368 aa8.06□□□□□ -1.12
NCL-208ENST00000466274 SHISA2Q6UWI4 295 aa8.06□□□□□ -1.12
NCL-208ENST00000466274 FOXD4L3Q6VB84 417 aaPredicted RBP8.06□□□□□ -1.12
NCL-208ENST00000466274 DNAJC10Q8IXB1 793 aa8.06□□□□□ -1.12
NCL-208ENST00000466274 DMRTC2Q8IXT2 367 aaPredicted RBP8.06□□□□□ -1.12
NCL-208ENST00000466274 SYNE4Q8N205 404 aa8.06□□□□□ -1.12
NCL-208ENST00000466274 SETDB2Q96T68 719 aa8.06□□□□□ -1.12
NCL-208ENST00000466274 EFCC1Q9HA90 598 aa8.06□□□□□ -1.12
NCL-208ENST00000466274 ADARB2Q9NS39 739 aaKnown RBP8.06□□□□□ -1.12
NCL-208ENST00000466274 RNF186Q9NXI6 227 aa8.06□□□□□ -1.12
NCL-208ENST00000466274 ZNF831Q5JPB2 1677 aa8.05□□□□□ -1.12
NCL-208ENST00000466274 NCAPD2Q15021 1401 aa8.05□□□□□ -1.12
NCL-208ENST00000466274 FAM196BA6NMK8 535 aa8.05□□□□□ -1.12
NCL-208ENST00000466274 C9orf172C9J069 976 aa8.05□□□□□ -1.12
NCL-208ENST00000466274 DYRK3O43781 588 aa8.05□□□□□ -1.12
NCL-208ENST00000466274 CYP19A1P11511 503 aaPredicted RBP8.05□□□□□ -1.12
NCL-208ENST00000466274 NPR1P16066 1061 aa8.05□□□□□ -1.12
NCL-208ENST00000466274 INPP5BP32019 993 aa8.05□□□□□ -1.12
NCL-208ENST00000466274 IDH3AP50213 366 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms