RNA–Protein interactions for RNA: ENST00000465132.1

CPSF4-209, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 927 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-209ENST00000465132 TSHZ3Q63HK5 1081 aa20.98■□□□□ 0.95
CPSF4-209ENST00000465132 CCDC84Q86UT8 332 aaPredicted RBP20.98■□□□□ 0.95
CPSF4-209ENST00000465132 KBTBD3Q8NAB2 608 aa20.98■□□□□ 0.95
CPSF4-209ENST00000465132 SLAIN1Q8ND83 568 aa20.98■□□□□ 0.95
CPSF4-209ENST00000465132 FSD1Q9BTV5 496 aa20.98■□□□□ 0.95
CPSF4-209ENST00000465132 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.98■□□□□ 0.95
CPSF4-209ENST00000465132 BIN2Q9UBW5 565 aaPredicted RBP20.98■□□□□ 0.95
CPSF4-209ENST00000465132 COLQQ9Y215 455 aaPredicted RBP20.98■□□□□ 0.95
CPSF4-209ENST00000465132 DOCK1Q14185 1865 aa20.98■□□□□ 0.95
CPSF4-209ENST00000465132 FAM196BA6NMK8 535 aa20.97■□□□□ 0.95
CPSF4-209ENST00000465132 H0YGN5 161 aa20.97■□□□□ 0.95
CPSF4-209ENST00000465132 GJA8P48165 433 aa20.97■□□□□ 0.95
CPSF4-209ENST00000465132 UBXN2AP68543 259 aa20.97■□□□□ 0.95
CPSF4-209ENST00000465132 NAA16Q6N069 864 aaPredicted RBP20.97■□□□□ 0.95
CPSF4-209ENST00000465132 SMCR8Q8TEV9 937 aaPredicted RBP20.97■□□□□ 0.95
CPSF4-209ENST00000465132 RNF208Q9H0X6 261 aa20.97■□□□□ 0.95
CPSF4-209ENST00000465132 AGTPBP1Q9UPW5 1226 aa20.97■□□□□ 0.95
CPSF4-209ENST00000465132 MYH7P12883 1935 aa20.97■□□□□ 0.95
CPSF4-209ENST00000465132 COL2A1P02458 1487 aaPredicted RBP20.96■□□□□ 0.95
CPSF4-209ENST00000465132 BAG3O95817 575 aa20.96■□□□□ 0.95
CPSF4-209ENST00000465132 RILPL2Q969X0 211 aa20.96■□□□□ 0.95
CPSF4-209ENST00000465132 OSBPL5Q9H0X9 879 aaPredicted RBP20.96■□□□□ 0.95
CPSF4-209ENST00000465132 PHIPQ8WWQ0 1821 aa20.95■□□□□ 0.94
CPSF4-209ENST00000465132 PLCG2P16885 1265 aa20.95■□□□□ 0.94
CPSF4-209ENST00000465132 FLT3LGP49771 235 aa20.95■□□□□ 0.94
CPSF4-209ENST00000465132 FXR1P51114 621 aaKnown RBP eCLIP20.95■□□□□ 0.94
CPSF4-209ENST00000465132 BMP2KLQ5H9B9 411 aa20.95■□□□□ 0.94
CPSF4-209ENST00000465132 TREML2Q5T2D2 321 aa20.95■□□□□ 0.94
CPSF4-209ENST00000465132 SLC9C2Q5TAH2 1124 aa20.95■□□□□ 0.94
CPSF4-209ENST00000465132 UBE2Q1Q7Z7E8 422 aa20.95■□□□□ 0.94
CPSF4-209ENST00000465132 PIH1D3Q9NQM4 214 aaKnown RBP20.95■□□□□ 0.94
CPSF4-209ENST00000465132 PTPRFP10586 1907 aa20.94■□□□□ 0.94
CPSF4-209ENST00000465132 TNPO2O14787 897 aaKnown RBP20.94■□□□□ 0.94
CPSF4-209ENST00000465132 ADCY3O60266 1144 aa20.94■□□□□ 0.94
CPSF4-209ENST00000465132 UBE3CQ15386 1083 aa20.94■□□□□ 0.94
CPSF4-209ENST00000465132 CASC1Q6TDU7 716 aa20.94■□□□□ 0.94
CPSF4-209ENST00000465132 TEX11Q8IYF3 940 aa20.94■□□□□ 0.94
CPSF4-209ENST00000465132 PROCA1Q8NCQ7 364 aaPredicted RBP20.94■□□□□ 0.94
CPSF4-209ENST00000465132 UNC93B1Q9H1C4 597 aa20.94■□□□□ 0.94
CPSF4-209ENST00000465132 MGAMO43451 1857 aa20.93■□□□□ 0.94
CPSF4-209ENST00000465132 SPP2Q13103 211 aa20.93■□□□□ 0.94
CPSF4-209ENST00000465132 ANKRD13CQ8N6S4 541 aa20.93■□□□□ 0.94
CPSF4-209ENST00000465132 ZNF280CQ8ND82 737 aa20.93■□□□□ 0.94
CPSF4-209ENST00000465132 PXYLP1Q8TE99 480 aa20.93■□□□□ 0.94
CPSF4-209ENST00000465132 U2AF1L4Q8WU68 220 aaKnown RBP20.93■□□□□ 0.94
CPSF4-209ENST00000465132 ANTXR1Q9H6X2 564 aa20.93■□□□□ 0.94
CPSF4-209ENST00000465132 PNMA3Q9UL41 463 aa20.93■□□□□ 0.94
CPSF4-209ENST00000465132 NDUFB9Q9Y6M9 179 aa20.93■□□□□ 0.94
CPSF4-209ENST00000465132 RNF113AO15541 343 aaKnown RBP20.92■□□□□ 0.94
CPSF4-209ENST00000465132 ELNP15502 786 aa20.92■□□□□ 0.94
CPSF4-209ENST00000465132 CAP2P40123 477 aa20.92■□□□□ 0.94
CPSF4-209ENST00000465132 IRF5Q13568 498 aa20.92■□□□□ 0.94
CPSF4-209ENST00000465132 RRP1BQ14684 758 aaKnown RBP20.92■□□□□ 0.94
CPSF4-209ENST00000465132 MAGEB6Q8N7X4 407 aa20.92■□□□□ 0.94
CPSF4-209ENST00000465132 SH3RF3Q8TEJ3 882 aaPredicted RBP20.92■□□□□ 0.94
CPSF4-209ENST00000465132 DPF3Q92784 378 aa20.92■□□□□ 0.94
CPSF4-209ENST00000465132 TBC1D2Q9BYX2 928 aa20.92■□□□□ 0.94
CPSF4-209ENST00000465132 HERC5Q9UII4 1024 aaKnown RBP20.92■□□□□ 0.94
CPSF4-209ENST00000465132 EIF5BO60841 1220 aaKnown RBP20.91■□□□□ 0.94
CPSF4-209ENST00000465132 PDE6AP16499 860 aa20.91■□□□□ 0.94
CPSF4-209ENST00000465132 CYP7A1P22680 504 aa20.91■□□□□ 0.94
CPSF4-209ENST00000465132 MFAP1P55081 439 aaKnown RBP20.91■□□□□ 0.94
CPSF4-209ENST00000465132 FAM110CQ1W6H9 321 aa20.91■□□□□ 0.94
CPSF4-209ENST00000465132 RUFY2Q8WXA3 655 aa20.91■□□□□ 0.94
CPSF4-209ENST00000465132 DIAPH3Q9NSV4 1193 aa20.91■□□□□ 0.94
CPSF4-209ENST00000465132 MYO5AQ9Y4I1 1855 aaKnown RBP20.91■□□□□ 0.94
CPSF4-209ENST00000465132 USP17L5A8MUK1 530 aa20.9■□□□□ 0.94
CPSF4-209ENST00000465132 SGPL1O95470 568 aa20.9■□□□□ 0.94
CPSF4-209ENST00000465132 INHAP05111 366 aa20.9■□□□□ 0.94
CPSF4-209ENST00000465132 ADD2P35612 726 aa20.9■□□□□ 0.94
CPSF4-209ENST00000465132 HMGCS2P54868 508 aa20.9■□□□□ 0.94
CPSF4-209ENST00000465132 COA7Q96BR5 231 aa20.9■□□□□ 0.94
CPSF4-209ENST00000465132 HTATIP2Q9BUP3 242 aa20.9■□□□□ 0.94
CPSF4-209ENST00000465132 PI4KBQ9UBF8 816 aa20.9■□□□□ 0.94
CPSF4-209ENST00000465132 FARP2O94887 1054 aaPredicted RBP20.89■□□□□ 0.93
CPSF4-209ENST00000465132 SDSP20132 328 aa20.89■□□□□ 0.93
CPSF4-209ENST00000465132 PABPC4Q13310 644 aaKnown RBP eCLIP20.89■□□□□ 0.93
CPSF4-209ENST00000465132 APPBP2Q92624 585 aa20.89■□□□□ 0.93
CPSF4-209ENST00000465132 EDC3Q96F86 508 aaKnown RBP20.89■□□□□ 0.93
CPSF4-209ENST00000465132 DHX36Q9H2U1 1008 aaKnown RBP20.89■□□□□ 0.93
CPSF4-209ENST00000465132 AATFQ9NY61 560 aaKnown RBP eCLIP20.89■□□□□ 0.93
CPSF4-209ENST00000465132 ZNF532Q9HCE3 1301 aa20.88■□□□□ 0.93
CPSF4-209ENST00000465132 GCLCP48506 637 aaPredicted RBP20.88■□□□□ 0.93
CPSF4-209ENST00000465132 PPP4CP60510 307 aa20.88■□□□□ 0.93
CPSF4-209ENST00000465132 SH3D19Q5HYK7 790 aa20.88■□□□□ 0.93
CPSF4-209ENST00000465132 CHRDL2Q6WN34 429 aa20.88■□□□□ 0.93
CPSF4-209ENST00000465132 AS3MTQ9HBK9 375 aa20.88■□□□□ 0.93
CPSF4-209ENST00000465132 HELLSQ9NRZ9 838 aa20.88■□□□□ 0.93
CPSF4-209ENST00000465132 LOC285556D6RIA3 1793 aa20.87■□□□□ 0.93
CPSF4-209ENST00000465132 MAGEB6P1A0A0J9YX57 407 aa20.87■□□□□ 0.93
CPSF4-209ENST00000465132 GSPT1P15170 499 aaKnown RBP20.87■□□□□ 0.93
CPSF4-209ENST00000465132 GNAT2P19087 354 aa20.87■□□□□ 0.93
CPSF4-209ENST00000465132 ADGRA1Q86SQ6 560 aa20.87■□□□□ 0.93
CPSF4-209ENST00000465132 DDRGK1Q96HY6 314 aa20.87■□□□□ 0.93
CPSF4-209ENST00000465132 ASCC2Q9H1I8 757 aaPredicted RBP20.87■□□□□ 0.93
CPSF4-209ENST00000465132 TAOK2Q9UL54 1235 aa20.87■□□□□ 0.93
CPSF4-209ENST00000465132 CEP290O15078 2479 aa20.86■□□□□ 0.93
CPSF4-209ENST00000465132 CAPN2P17655 700 aa20.86■□□□□ 0.93
CPSF4-209ENST00000465132 MAPKAPK5Q8IW41 473 aa20.86■□□□□ 0.93
CPSF4-209ENST00000465132 TGFBRAP1Q8WUH2 860 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms