RNA–Protein interactions for RNA: ENST00000464408.3

ALMS1-202, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

TSL 5

Gene ALMS1, Length 640 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-202ENST00000464408 ASNSP08243 561 aa17.69■□□□□ 0.42
ALMS1-202ENST00000464408 GJA8P48165 433 aa17.69■□□□□ 0.42
ALMS1-202ENST00000464408 BACE1P56817 501 aa17.69■□□□□ 0.42
ALMS1-202ENST00000464408 UBXN2AP68543 259 aa17.69■□□□□ 0.42
ALMS1-202ENST00000464408 HABP4Q5JVS0 413 aaKnown RBP17.69■□□□□ 0.42
ALMS1-202ENST00000464408 ERC1Q8IUD2 1116 aa17.69■□□□□ 0.42
ALMS1-202ENST00000464408 TRIM34Q9BYJ4 488 aa17.69■□□□□ 0.42
ALMS1-202ENST00000464408 BCL11AQ9H165 835 aa17.69■□□□□ 0.42
ALMS1-202ENST00000464408 EVX2Q03828 476 aa17.68■□□□□ 0.42
ALMS1-202ENST00000464408 UBE2Q1Q7Z7E8 422 aa17.68■□□□□ 0.42
ALMS1-202ENST00000464408 U2AF1L4Q8WU68 220 aaKnown RBP17.68■□□□□ 0.42
ALMS1-202ENST00000464408 H0YGN5 161 aa17.67■□□□□ 0.42
ALMS1-202ENST00000464408 HLA-DOAP06340 250 aa17.67■□□□□ 0.42
ALMS1-202ENST00000464408 USP5P45974 858 aa17.67■□□□□ 0.42
ALMS1-202ENST00000464408 GCLCP48506 637 aaPredicted RBP17.67■□□□□ 0.42
ALMS1-202ENST00000464408 IRF5Q13568 498 aa17.67■□□□□ 0.42
ALMS1-202ENST00000464408 COA7Q96BR5 231 aa17.67■□□□□ 0.42
ALMS1-202ENST00000464408 GCC1Q96CN9 775 aa17.67■□□□□ 0.42
ALMS1-202ENST00000464408 P2RX7Q99572 595 aaKnown RBP17.67■□□□□ 0.42
ALMS1-202ENST00000464408 RIOK1Q9BRS2 568 aaKnown RBP17.67■□□□□ 0.42
ALMS1-202ENST00000464408 TXNRD2Q9NNW7 524 aa17.67■□□□□ 0.42
ALMS1-202ENST00000464408 ZBTB40Q9NUA8 1239 aa17.67■□□□□ 0.42
ALMS1-202ENST00000464408 IGSF3O75054 1194 aa17.66■□□□□ 0.42
ALMS1-202ENST00000464408 GH2P01242 217 aa17.66■□□□□ 0.42
ALMS1-202ENST00000464408 MAP3K12Q12852 859 aa17.66■□□□□ 0.42
ALMS1-202ENST00000464408 PABPC4Q13310 644 aaKnown RBP eCLIP17.66■□□□□ 0.42
ALMS1-202ENST00000464408 POTEEQ6S8J3 1075 aa17.66■□□□□ 0.42
ALMS1-202ENST00000464408 PXYLP1Q8TE99 480 aa17.66■□□□□ 0.42
ALMS1-202ENST00000464408 EDC3Q96F86 508 aaKnown RBP17.66■□□□□ 0.42
ALMS1-202ENST00000464408 TMOD4Q9NZQ9 345 aa17.66■□□□□ 0.42
ALMS1-202ENST00000464408 ALPK3Q96L96 1907 aa17.66■□□□□ 0.42
ALMS1-202ENST00000464408 RANBP2P49792 3224 aaKnown RBP17.66■□□□□ 0.42
ALMS1-202ENST00000464408 USP17L10C9JJH3 530 aa17.65■□□□□ 0.42
ALMS1-202ENST00000464408 HOXA7P31268 230 aaPredicted RBP17.65■□□□□ 0.42
ALMS1-202ENST00000464408 IRX3P78415 501 aaPredicted RBP17.65■□□□□ 0.42
ALMS1-202ENST00000464408 TRIM32Q13049 653 aa17.65■□□□□ 0.42
ALMS1-202ENST00000464408 NKX2-3Q8TAU0 364 aa17.65■□□□□ 0.42
ALMS1-202ENST00000464408 DNAJC2Q99543 621 aaKnown RBP17.65■□□□□ 0.42
ALMS1-202ENST00000464408 EMILIN3Q9NT22 766 aa17.65■□□□□ 0.42
ALMS1-202ENST00000464408 MORF4L1Q9UBU8 362 aa17.65■□□□□ 0.42
ALMS1-202ENST00000464408 GJD2Q9UKL4 321 aa17.65■□□□□ 0.42
ALMS1-202ENST00000464408 COLQQ9Y215 455 aaPredicted RBP17.65■□□□□ 0.42
ALMS1-202ENST00000464408 GOLIM4O00461 696 aa17.64■□□□□ 0.41
ALMS1-202ENST00000464408 SGPL1O95470 568 aa17.64■□□□□ 0.41
ALMS1-202ENST00000464408 PDE6AP16499 860 aa17.64■□□□□ 0.41
ALMS1-202ENST00000464408 PLCD1P51178 756 aa17.64■□□□□ 0.41
ALMS1-202ENST00000464408 HERVK_113P62684 666 aa17.64■□□□□ 0.41
ALMS1-202ENST00000464408 ZYXQ15942 572 aaKnown RBP17.64■□□□□ 0.41
ALMS1-202ENST00000464408 SLFNL1Q499Z3 407 aa17.64■□□□□ 0.41
ALMS1-202ENST00000464408 HSP90AB4PQ58FF6 505 aa17.64■□□□□ 0.41
ALMS1-202ENST00000464408 C20orf194Q5TEA3 1177 aa17.64■□□□□ 0.41
ALMS1-202ENST00000464408 TATDN1Q6P1N9 297 aa17.64■□□□□ 0.41
ALMS1-202ENST00000464408 DEFB118Q96PH6 123 aa17.64■□□□□ 0.41
ALMS1-202ENST00000464408 SERPINB13Q9UIV8 391 aa17.64■□□□□ 0.41
ALMS1-202ENST00000464408 DDX19BQ9UMR2 479 aa17.64■□□□□ 0.41
ALMS1-202ENST00000464408 BAZ2AQ9UIF9 1905 aaKnown RBP17.63■□□□□ 0.41
ALMS1-202ENST00000464408 MAGEB6P1A0A0J9YX57 407 aa17.63■□□□□ 0.41
ALMS1-202ENST00000464408 C19orf81C9J6K1 198 aa17.63■□□□□ 0.41
ALMS1-202ENST00000464408 FARP2O94887 1054 aaPredicted RBP17.63■□□□□ 0.41
ALMS1-202ENST00000464408 SHMT1P34896 483 aa17.63■□□□□ 0.41
ALMS1-202ENST00000464408 SLC9C2Q5TAH2 1124 aa17.63■□□□□ 0.41
ALMS1-202ENST00000464408 RPAP2Q8IXW5 612 aaPredicted RBP17.63■□□□□ 0.41
ALMS1-202ENST00000464408 DPF3Q92784 378 aa17.63■□□□□ 0.41
ALMS1-202ENST00000464408 KIF1BPQ96EK5 621 aa17.63■□□□□ 0.41
ALMS1-202ENST00000464408 EHD4Q9H223 541 aa17.63■□□□□ 0.41
ALMS1-202ENST00000464408 PAK6Q9NQU5 681 aaPredicted RBP17.63■□□□□ 0.41
ALMS1-202ENST00000464408 GINM1Q9NU53 330 aa17.63■□□□□ 0.41
ALMS1-202ENST00000464408 RBPJLQ9UBG7 517 aa17.63■□□□□ 0.41
ALMS1-202ENST00000464408 ZNF532Q9HCE3 1301 aa17.63■□□□□ 0.41
ALMS1-202ENST00000464408 MYH7P12883 1935 aa17.62■□□□□ 0.41
ALMS1-202ENST00000464408 TCRBV5S4A2TA0A5A2 114 aa17.62■□□□□ 0.41
ALMS1-202ENST00000464408 CHGBP05060 677 aa17.62■□□□□ 0.41
ALMS1-202ENST00000464408 MS4A1P11836 297 aa17.62■□□□□ 0.41
ALMS1-202ENST00000464408 RAB3GAP1Q15042 981 aa17.62■□□□□ 0.41
ALMS1-202ENST00000464408 Q3C1V9 767 aa17.62■□□□□ 0.41
ALMS1-202ENST00000464408 CLASRPQ8N2M8 674 aaKnown RBP17.62■□□□□ 0.41
ALMS1-202ENST00000464408 ACER1Q8TDN7 264 aa17.62■□□□□ 0.41
ALMS1-202ENST00000464408 RCAN3Q9UKA8 241 aa17.62■□□□□ 0.41
ALMS1-202ENST00000464408 MYH8P13535 1937 aa17.62■□□□□ 0.41
ALMS1-202ENST00000464408 IFIT2P09913 472 aaKnown RBP17.61■□□□□ 0.41
ALMS1-202ENST00000464408 USP17L2Q6R6M4 530 aa17.61■□□□□ 0.41
ALMS1-202ENST00000464408 CERS3Q8IU89 383 aa17.61■□□□□ 0.41
ALMS1-202ENST00000464408 LCORLQ8N3X6 602 aa17.61■□□□□ 0.41
ALMS1-202ENST00000464408 SDR42E1Q8WUS8 393 aa17.61■□□□□ 0.41
ALMS1-202ENST00000464408 TRIB2Q92519 343 aa17.61■□□□□ 0.41
ALMS1-202ENST00000464408 PAGR1Q9BTK6 254 aa17.61■□□□□ 0.41
ALMS1-202ENST00000464408 PORCNQ9H237 461 aa17.61■□□□□ 0.41
ALMS1-202ENST00000464408 SZT2Q5T011 3432 aa17.61■□□□□ 0.41
ALMS1-202ENST00000464408 HMMRO75330 724 aa17.6■□□□□ 0.41
ALMS1-202ENST00000464408 TFRCP02786 760 aaKnown RBP17.6■□□□□ 0.41
ALMS1-202ENST00000464408 HMGCRP04035 888 aa17.6■□□□□ 0.41
ALMS1-202ENST00000464408 CYP2D6P10635 497 aa17.6■□□□□ 0.41
ALMS1-202ENST00000464408 CYP2B6P20813 491 aa17.6■□□□□ 0.41
ALMS1-202ENST00000464408 GUCY1A2P33402 732 aa17.6■□□□□ 0.41
ALMS1-202ENST00000464408 FXR1P51114 621 aaKnown RBP eCLIP17.6■□□□□ 0.41
ALMS1-202ENST00000464408 TTF1Q15361 905 aaPredicted RBP17.6■□□□□ 0.41
ALMS1-202ENST00000464408 ABCB5Q2M3G0 1257 aa17.6■□□□□ 0.41
ALMS1-202ENST00000464408 CERKLQ49MI3 558 aaPredicted RBP17.6■□□□□ 0.41
ALMS1-202ENST00000464408 CHRDL2Q6WN34 429 aa17.6■□□□□ 0.41
ALMS1-202ENST00000464408 TTC6Q86TZ1 520 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms