RNA–Protein interactions for RNA: ENST00000464313.1

PTPN12-210, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 4

Gene PTPN12, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-210ENST00000464313 ANGEL2Q5VTE6 544 aaKnown RBP6.75□□□□□ -1.33
PTPN12-210ENST00000464313 TTBK2Q6IQ55 1244 aa6.75□□□□□ -1.33
PTPN12-210ENST00000464313 METTL16Q86W50 562 aaKnown RBP6.75□□□□□ -1.33
PTPN12-210ENST00000464313 SULF2Q8IWU5 870 aa6.75□□□□□ -1.33
PTPN12-210ENST00000464313 RNF34Q969K3 372 aa6.75□□□□□ -1.33
PTPN12-210ENST00000464313 GGT7Q9UJ14 662 aa6.75□□□□□ -1.33
PTPN12-210ENST00000464313 TLR6Q9Y2C9 796 aa6.75□□□□□ -1.33
PTPN12-210ENST00000464313 PCDHGC5Q9Y5F6 944 aa6.75□□□□□ -1.33
PTPN12-210ENST00000464313 PCDHGB7Q9Y5F8 929 aa6.75□□□□□ -1.33
PTPN12-210ENST00000464313 TMEM265A0A087WTH1 108 aa6.74□□□□□ -1.33
PTPN12-210ENST00000464313 ZNF503-AS2A6NEH8 195 aa6.74□□□□□ -1.33
PTPN12-210ENST00000464313 SLFN14P0C7P3 912 aa6.74□□□□□ -1.33
PTPN12-210ENST00000464313 BMP6P22004 513 aa6.74□□□□□ -1.33
PTPN12-210ENST00000464313 NME2P22392 152 aa6.74□□□□□ -1.33
PTPN12-210ENST00000464313 LIG3P49916 1009 aa6.74□□□□□ -1.33
PTPN12-210ENST00000464313 MPRIPQ6WCQ1 1025 aa6.74□□□□□ -1.33
PTPN12-210ENST00000464313 HS2ST1Q7LGA3 356 aa6.74□□□□□ -1.33
PTPN12-210ENST00000464313 TOP6BLQ8N6T0 577 aa6.74□□□□□ -1.33
PTPN12-210ENST00000464313 GRIN3AQ8TCU5 1115 aa6.74□□□□□ -1.33
PTPN12-210ENST00000464313 NOC4LQ9BVI4 516 aaKnown RBP6.74□□□□□ -1.33
PTPN12-210ENST00000464313 CBX8Q9HC52 389 aa6.74□□□□□ -1.33
PTPN12-210ENST00000464313 METTL5Q9NRN9 209 aaKnown RBP6.74□□□□□ -1.33
PTPN12-210ENST00000464313 KBTBD4Q9NVX7 518 aa6.74□□□□□ -1.33
PTPN12-210ENST00000464313 NEFMP07197 916 aa6.73□□□□□ -1.33
PTPN12-210ENST00000464313 KIF4BQ2VIQ3 1234 aa6.73□□□□□ -1.33
PTPN12-210ENST00000464313 SLC23A3Q6PIS1 610 aa6.73□□□□□ -1.33
PTPN12-210ENST00000464313 ERMP1Q7Z2K6 904 aa6.73□□□□□ -1.33
PTPN12-210ENST00000464313 PDZD3Q86UT5 571 aa6.73□□□□□ -1.33
PTPN12-210ENST00000464313 ZSWIM9Q86XI8 627 aa6.73□□□□□ -1.33
PTPN12-210ENST00000464313 NT5DC4Q86YG4 428 aa6.73□□□□□ -1.33
PTPN12-210ENST00000464313 FLAD1Q8NFF5 587 aa6.73□□□□□ -1.33
PTPN12-210ENST00000464313 MKNK2Q9HBH9 465 aa6.73□□□□□ -1.33
PTPN12-210ENST00000464313 PCOLCE2Q9UKZ9 415 aa6.73□□□□□ -1.33
PTPN12-210ENST00000464313 MINDY4BA8MYZ0 360 aa6.72□□□□□ -1.33
PTPN12-210ENST00000464313 TSPAN15O95858 294 aa6.72□□□□□ -1.33
PTPN12-210ENST00000464313 GSTP1P09211 210 aaKnown RBP6.72□□□□□ -1.33
PTPN12-210ENST00000464313 ARNTP27540 789 aa6.72□□□□□ -1.33
PTPN12-210ENST00000464313 MAP1SQ66K74 1059 aaPredicted RBP6.72□□□□□ -1.33
PTPN12-210ENST00000464313 USP48Q86UV5 1035 aa6.72□□□□□ -1.33
PTPN12-210ENST00000464313 ISL2Q96A47 359 aa6.72□□□□□ -1.33
PTPN12-210ENST00000464313 LIN37Q96GY3 246 aaPredicted RBP6.72□□□□□ -1.33
PTPN12-210ENST00000464313 HEXIM2Q96MH2 286 aaKnown RBP6.72□□□□□ -1.33
PTPN12-210ENST00000464313 PCDHB5Q9Y5E4 795 aa6.72□□□□□ -1.33
PTPN12-210ENST00000464313 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.71□□□□□ -1.34
PTPN12-210ENST00000464313 TFE3P19532 575 aaPredicted RBP6.71□□□□□ -1.34
PTPN12-210ENST00000464313 GBP2P32456 591 aaPredicted RBP6.71□□□□□ -1.34
PTPN12-210ENST00000464313 FAM160A1Q05DH4 1040 aa6.71□□□□□ -1.34
PTPN12-210ENST00000464313 RAD51AP2Q09MP3 1159 aa6.71□□□□□ -1.34
PTPN12-210ENST00000464313 ZNF252P-AS1Q0IIN9 211 aa6.71□□□□□ -1.34
PTPN12-210ENST00000464313 SEPT6Q14141 434 aa6.71□□□□□ -1.34
PTPN12-210ENST00000464313 KCNMB1Q16558 191 aa6.71□□□□□ -1.34
PTPN12-210ENST00000464313 ANKLE2Q86XL3 938 aa6.71□□□□□ -1.34
PTPN12-210ENST00000464313 KCNB2Q92953 911 aa6.71□□□□□ -1.34
PTPN12-210ENST00000464313 RSRP1Q9BUV0 290 aa6.71□□□□□ -1.34
PTPN12-210ENST00000464313 TNKS2Q9H2K2 1166 aa6.71□□□□□ -1.34
PTPN12-210ENST00000464313 ERCC5P28715 1186 aaPredicted RBP6.7□□□□□ -1.34
PTPN12-210ENST00000464313 RACK1P63244 317 aaKnown RBP6.7□□□□□ -1.34
PTPN12-210ENST00000464313 IKZF1Q13422 519 aa6.7□□□□□ -1.34
PTPN12-210ENST00000464313 FYB2Q5VWT5 728 aa6.7□□□□□ -1.34
PTPN12-210ENST00000464313 LLGL2Q6P1M3 1020 aa6.7□□□□□ -1.34
PTPN12-210ENST00000464313 AGMOQ6ZNB7 445 aa6.7□□□□□ -1.34
PTPN12-210ENST00000464313 RELL1Q8IUW5 271 aa6.7□□□□□ -1.34
PTPN12-210ENST00000464313 PHC3Q8NDX5 983 aa6.7□□□□□ -1.34
PTPN12-210ENST00000464313 RHOVQ96L33 236 aa6.7□□□□□ -1.34
PTPN12-210ENST00000464313 TMEM74Q96NL1 305 aa6.7□□□□□ -1.34
PTPN12-210ENST00000464313 PPP1R16BQ96T49 567 aa6.7□□□□□ -1.34
PTPN12-210ENST00000464313 SSU72Q9NP77 194 aaKnown RBP6.7□□□□□ -1.34
PTPN12-210ENST00000464313 FAM53CQ9NYF3 392 aa6.7□□□□□ -1.34
PTPN12-210ENST00000464313 SAMM50Q9Y512 469 aa6.7□□□□□ -1.34
PTPN12-210ENST00000464313 PF4P02776 101 aa6.69□□□□□ -1.34
PTPN12-210ENST00000464313 ZP2Q05996 745 aa6.69□□□□□ -1.34
PTPN12-210ENST00000464313 PTPN11Q06124 597 aaPredicted RBP6.69□□□□□ -1.34
PTPN12-210ENST00000464313 FAM214BQ7L5A3 538 aa6.69□□□□□ -1.34
PTPN12-210ENST00000464313 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.69□□□□□ -1.34
PTPN12-210ENST00000464313 GPBAR1Q8TDU6 330 aa6.69□□□□□ -1.34
PTPN12-210ENST00000464313 EMILIN2Q9BXX0 1053 aa6.69□□□□□ -1.34
PTPN12-210ENST00000464313 KRT82Q9NSB4 513 aa6.69□□□□□ -1.34
PTPN12-210ENST00000464313 CTNND2Q9UQB3 1225 aa6.69□□□□□ -1.34
PTPN12-210ENST00000464313 CTSWP56202 376 aa6.68□□□□□ -1.34
PTPN12-210ENST00000464313 RPS26P62854 115 aaKnown RBP6.68□□□□□ -1.34
PTPN12-210ENST00000464313 GAL3ST3Q96A11 431 aa6.68□□□□□ -1.34
PTPN12-210ENST00000464313 ADAMTS1Q9UHI8 967 aa6.68□□□□□ -1.34
PTPN12-210ENST00000464313 DDX41Q9UJV9 622 aaKnown RBP6.68□□□□□ -1.34
PTPN12-210ENST00000464313 SNX11Q9Y5W9 270 aa6.68□□□□□ -1.34
PTPN12-210ENST00000464313 RLBP1P12271 317 aa6.67□□□□□ -1.34
PTPN12-210ENST00000464313 LMNB1P20700 586 aa6.67□□□□□ -1.34
PTPN12-210ENST00000464313 CAMK2GQ13555 558 aaPredicted RBP6.67□□□□□ -1.34
PTPN12-210ENST00000464313 LRRC14Q15048 493 aa6.67□□□□□ -1.34
PTPN12-210ENST00000464313 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.67□□□□□ -1.34
PTPN12-210ENST00000464313 BNC2Q6ZN30 1099 aaPredicted RBP6.67□□□□□ -1.34
PTPN12-210ENST00000464313 PRR23BQ6ZRT6 265 aa6.67□□□□□ -1.34
PTPN12-210ENST00000464313 SPACA3Q8IXA5 215 aa6.67□□□□□ -1.34
PTPN12-210ENST00000464313 ACSBG1Q96GR2 724 aa6.67□□□□□ -1.34
PTPN12-210ENST00000464313 ACBD3Q9H3P7 528 aa6.67□□□□□ -1.34
PTPN12-210ENST00000464313 CYP8B1Q9UNU6 501 aa6.67□□□□□ -1.34
PTPN12-210ENST00000464313 TRIM37O94972 964 aa6.66□□□□□ -1.34
PTPN12-210ENST00000464313 INHBBP09529 407 aa6.66□□□□□ -1.34
PTPN12-210ENST00000464313 GARTP22102 1010 aa6.66□□□□□ -1.34
PTPN12-210ENST00000464313 EIF4A3P38919 411 aaKnown RBP6.66□□□□□ -1.34
PTPN12-210ENST00000464313 TNNI2P48788 182 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms