RNA–Protein interactions for RNA: ENST00000462733.5

ATPAF2-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 1 (best)

Gene ATPAF2, Length 1,737 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-202ENST00000462733 TTC14Q96N46 770 aa21.18■□□□□ 0.98
ATPAF2-202ENST00000462733 TRIM34Q9BYJ4 488 aa21.18■□□□□ 0.98
ATPAF2-202ENST00000462733 GLIS2Q9BZE0 524 aaPredicted RBP21.18■□□□□ 0.98
ATPAF2-202ENST00000462733 TOMM22Q9NS69 142 aa21.18■□□□□ 0.98
ATPAF2-202ENST00000462733 PPP2R3BQ9Y5P8 575 aa21.18■□□□□ 0.98
ATPAF2-202ENST00000462733 PRDM1O75626 825 aa21.17■□□□□ 0.98
ATPAF2-202ENST00000462733 ADCK5Q3MIX3 580 aa21.17■□□□□ 0.98
ATPAF2-202ENST00000462733 RRP12Q5JTH9 1297 aaKnown RBP21.17■□□□□ 0.98
ATPAF2-202ENST00000462733 MFSD6Q6ZSS7 791 aa21.17■□□□□ 0.98
ATPAF2-202ENST00000462733 MIGA2Q7L4E1 593 aa21.17■□□□□ 0.98
ATPAF2-202ENST00000462733 STAG1Q8WVM7 1258 aa21.17■□□□□ 0.98
ATPAF2-202ENST00000462733 UPF3BQ9BZI7 483 aaKnown RBP21.17■□□□□ 0.98
ATPAF2-202ENST00000462733 TM6SF1Q9BZW5 370 aa21.17■□□□□ 0.98
ATPAF2-202ENST00000462733 ROBO3Q96MS0 1386 aa21.16■□□□□ 0.98
ATPAF2-202ENST00000462733 PDE4BQ07343 736 aa21.16■□□□□ 0.98
ATPAF2-202ENST00000462733 CDC37L1Q7L3B6 337 aa21.16■□□□□ 0.98
ATPAF2-202ENST00000462733 NEDD4P46934 1319 aa21.16■□□□□ 0.98
ATPAF2-202ENST00000462733 MYH8P13535 1937 aa21.16■□□□□ 0.98
ATPAF2-202ENST00000462733 CDK8P49336 464 aa21.15■□□□□ 0.98
ATPAF2-202ENST00000462733 GABPAQ06546 454 aa21.15■□□□□ 0.98
ATPAF2-202ENST00000462733 TSGA10IPQ3SY00 556 aa21.15■□□□□ 0.98
ATPAF2-202ENST00000462733 C16orf86Q6ZW13 317 aa21.15■□□□□ 0.98
ATPAF2-202ENST00000462733 FOXP4Q8IVH2 680 aaPredicted RBP21.15■□□□□ 0.98
ATPAF2-202ENST00000462733 TRIM44Q96DX7 344 aaPredicted RBP21.15■□□□□ 0.98
ATPAF2-202ENST00000462733 JAKMIP1Q96N16 626 aaKnown RBP21.15■□□□□ 0.98
ATPAF2-202ENST00000462733 EHD4Q9H223 541 aa21.15■□□□□ 0.98
ATPAF2-202ENST00000462733 RNF41Q9H4P4 317 aaPredicted RBP21.15■□□□□ 0.98
ATPAF2-202ENST00000462733 MKNK2Q9HBH9 465 aa21.15■□□□□ 0.98
ATPAF2-202ENST00000462733 KRT32Q14532 448 aa21.15■□□□□ 0.98
ATPAF2-202ENST00000462733 GPT2Q8TD30 523 aa21.15■□□□□ 0.98
ATPAF2-202ENST00000462733 DNAJC18Q9H819 358 aa21.15■□□□□ 0.98
ATPAF2-202ENST00000462733 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.15■□□□□ 0.98
ATPAF2-202ENST00000462733 LIMCH1Q9UPQ0 1083 aa21.15■□□□□ 0.98
ATPAF2-202ENST00000462733 TRDNQ13061 729 aa21.14■□□□□ 0.97
ATPAF2-202ENST00000462733 B4E1Z4 1266 aa21.13■□□□□ 0.97
ATPAF2-202ENST00000462733 NCLP19338 710 aaKnown RBP21.13■□□□□ 0.97
ATPAF2-202ENST00000462733 NKX2-3Q8TAU0 364 aa21.13■□□□□ 0.97
ATPAF2-202ENST00000462733 CDCA5Q96FF9 252 aa21.13■□□□□ 0.97
ATPAF2-202ENST00000462733 NEK1Q96PY6 1258 aa21.13■□□□□ 0.97
ATPAF2-202ENST00000462733 SWAP70Q9UH65 585 aa21.13■□□□□ 0.97
ATPAF2-202ENST00000462733 HERC5Q9UII4 1024 aaKnown RBP21.13■□□□□ 0.97
ATPAF2-202ENST00000462733 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.13■□□□□ 0.97
ATPAF2-202ENST00000462733 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.13■□□□□ 0.97
ATPAF2-202ENST00000462733 COL9A3Q14050 684 aaPredicted RBP21.12■□□□□ 0.97
ATPAF2-202ENST00000462733 SUPT20HL1Q3ZLR7 823 aa21.12■□□□□ 0.97
ATPAF2-202ENST00000462733 RALYLQ86SE5 291 aaKnown RBP21.12■□□□□ 0.97
ATPAF2-202ENST00000462733 NCOA7Q8NI08 942 aa21.12■□□□□ 0.97
ATPAF2-202ENST00000462733 SYAP1Q96A49 352 aaPredicted RBP21.12■□□□□ 0.97
ATPAF2-202ENST00000462733 ZNF287Q9HBT7 754 aa21.12■□□□□ 0.97
ATPAF2-202ENST00000462733 ESPNB1AK53 854 aa21.12■□□□□ 0.97
ATPAF2-202ENST00000462733 TRAF5O00463 557 aa21.12■□□□□ 0.97
ATPAF2-202ENST00000462733 KIF3CO14782 793 aa21.12■□□□□ 0.97
ATPAF2-202ENST00000462733 RANBP6O60518 1105 aaKnown RBP21.12■□□□□ 0.97
ATPAF2-202ENST00000462733 FGRP09769 529 aa21.12■□□□□ 0.97
ATPAF2-202ENST00000462733 PCP11498 1178 aaKnown RBP21.12■□□□□ 0.97
ATPAF2-202ENST00000462733 CASTP20810 708 aaKnown RBP21.12■□□□□ 0.97
ATPAF2-202ENST00000462733 SHMT1P34896 483 aa21.12■□□□□ 0.97
ATPAF2-202ENST00000462733 METTL16Q86W50 562 aaKnown RBP21.12■□□□□ 0.97
ATPAF2-202ENST00000462733 TMEM87AQ8NBN3 555 aa21.12■□□□□ 0.97
ATPAF2-202ENST00000462733 ZSCAN31Q96LW9 406 aaPredicted RBP21.12■□□□□ 0.97
ATPAF2-202ENST00000462733 KRT23Q9C075 422 aa21.12■□□□□ 0.97
ATPAF2-202ENST00000462733 CNNM2Q9H8M5 875 aa21.12■□□□□ 0.97
ATPAF2-202ENST00000462733 FZD1Q9UP38 647 aa21.12■□□□□ 0.97
ATPAF2-202ENST00000462733 ORC4O43929 436 aa21.11■□□□□ 0.97
ATPAF2-202ENST00000462733 CPA1P15085 419 aa21.11■□□□□ 0.97
ATPAF2-202ENST00000462733 PSMA5P28066 241 aa21.11■□□□□ 0.97
ATPAF2-202ENST00000462733 PRKG1Q13976 671 aa21.11■□□□□ 0.97
ATPAF2-202ENST00000462733 FAM47AQ5JRC9 791 aa21.11■□□□□ 0.97
ATPAF2-202ENST00000462733 CHADLQ6NUI6 762 aa21.11■□□□□ 0.97
ATPAF2-202ENST00000462733 ZNF444Q8N0Y2 327 aaPredicted RBP21.11■□□□□ 0.97
ATPAF2-202ENST00000462733 SH2B1Q9NRF2 756 aaPredicted RBP21.11■□□□□ 0.97
ATPAF2-202ENST00000462733 SSC5DA1L4H1 1573 aa21.1■□□□□ 0.97
ATPAF2-202ENST00000462733 TBC1D12O60347 775 aa21.1■□□□□ 0.97
ATPAF2-202ENST00000462733 KDM4AO75164 1064 aa21.1■□□□□ 0.97
ATPAF2-202ENST00000462733 PDIA4P13667 645 aaKnown RBP21.1■□□□□ 0.97
ATPAF2-202ENST00000462733 RASA1P20936 1047 aa21.1■□□□□ 0.97
ATPAF2-202ENST00000462733 FMR1Q06787 632 aaKnown RBP eCLIP21.1■□□□□ 0.97
ATPAF2-202ENST00000462733 LRSAM1Q6UWE0 723 aa21.1■□□□□ 0.97
ATPAF2-202ENST00000462733 CHST3Q7LGC8 479 aa21.1■□□□□ 0.97
ATPAF2-202ENST00000462733 HOOK2Q96ED9 719 aa21.1■□□□□ 0.97
ATPAF2-202ENST00000462733 AK2P54819 239 aa21.09■□□□□ 0.97
ATPAF2-202ENST00000462733 DCAF15Q66K64 600 aa21.09■□□□□ 0.97
ATPAF2-202ENST00000462733 BLOC1S2Q6QNY1 142 aa21.09■□□□□ 0.97
ATPAF2-202ENST00000462733 ZNF784Q8NCA9 323 aaPredicted RBP21.09■□□□□ 0.97
ATPAF2-202ENST00000462733 ESR2Q92731 530 aa21.09■□□□□ 0.97
ATPAF2-202ENST00000462733 TSPY2A6NKD2 308 aa21.09■□□□□ 0.97
ATPAF2-202ENST00000462733 NF2P35240 595 aa21.09■□□□□ 0.97
ATPAF2-202ENST00000462733 TFAP4Q01664 338 aa21.09■□□□□ 0.97
ATPAF2-202ENST00000462733 MAP3K10Q02779 954 aa21.09■□□□□ 0.97
ATPAF2-202ENST00000462733 CERKLQ49MI3 558 aaPredicted RBP21.09■□□□□ 0.97
ATPAF2-202ENST00000462733 HS1BP3Q53T59 392 aa21.09■□□□□ 0.97
ATPAF2-202ENST00000462733 TATDN1Q6P1N9 297 aa21.09■□□□□ 0.97
ATPAF2-202ENST00000462733 NOL8Q76FK4 1167 aaKnown RBP21.09■□□□□ 0.97
ATPAF2-202ENST00000462733 MB21D2Q8IYB1 491 aaPredicted RBP21.09■□□□□ 0.97
ATPAF2-202ENST00000462733 TCEANC2Q96MN5 208 aa21.09■□□□□ 0.97
ATPAF2-202ENST00000462733 ZNF408Q9H9D4 720 aa21.09■□□□□ 0.97
ATPAF2-202ENST00000462733 ZSWIM6Q9HCJ5 1215 aa21.09■□□□□ 0.97
ATPAF2-202ENST00000462733 ZSWIM5Q9P217 1185 aa21.09■□□□□ 0.97
ATPAF2-202ENST00000462733 GDF11O95390 407 aa21.08■□□□□ 0.97
ATPAF2-202ENST00000462733 AKR1B1P15121 316 aa21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms