RNA–Protein interactions for RNA: ENST00000462267.1

APP-211, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 667 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-211ENST00000462267 C19orf81C9J6K1 198 aa18.96■□□□□ 0.63
APP-211ENST00000462267 CIAO1O76071 339 aa18.96■□□□□ 0.63
APP-211ENST00000462267 MAP2K5Q13163 448 aa18.96■□□□□ 0.63
APP-211ENST00000462267 RRP1BQ14684 758 aaKnown RBP18.96■□□□□ 0.63
APP-211ENST00000462267 Q3C1V9 767 aa18.96■□□□□ 0.63
APP-211ENST00000462267 CCDC102BQ68D86 513 aa18.96■□□□□ 0.63
APP-211ENST00000462267 DDX20Q9UHI6 824 aaKnown RBP18.96■□□□□ 0.63
APP-211ENST00000462267 HERC5Q9UII4 1024 aaKnown RBP18.96■□□□□ 0.63
APP-211ENST00000462267 MUC3AQ02505 3323 aa18.96■□□□□ 0.63
APP-211ENST00000462267 EDC3Q96F86 508 aaKnown RBP18.95■□□□□ 0.62
APP-211ENST00000462267 GLRX3O76003 335 aaKnown RBP18.94■□□□□ 0.62
APP-211ENST00000462267 ASNSP08243 561 aa18.94■□□□□ 0.62
APP-211ENST00000462267 MECOMQ03112 1051 aa18.94■□□□□ 0.62
APP-211ENST00000462267 RASGRF1Q13972 1273 aa18.94■□□□□ 0.62
APP-211ENST00000462267 CWC22Q9HCG8 908 aaKnown RBP18.94■□□□□ 0.62
APP-211ENST00000462267 ATP11BQ9Y2G3 1177 aa18.94■□□□□ 0.62
APP-211ENST00000462267 CDH23Q9H251 3354 aa18.94■□□□□ 0.62
APP-211ENST00000462267 LTBP2Q14767 1821 aa18.93■□□□□ 0.62
APP-211ENST00000462267 ERICH6Q7L0X2 663 aa18.93■□□□□ 0.62
APP-211ENST00000462267 PAGR1Q9BTK6 254 aa18.93■□□□□ 0.62
APP-211ENST00000462267 SIL1Q9H173 461 aa18.93■□□□□ 0.62
APP-211ENST00000462267 SALL2Q9Y467 1007 aaPredicted RBP18.93■□□□□ 0.62
APP-211ENST00000462267 LDHCP07864 332 aa18.92■□□□□ 0.62
APP-211ENST00000462267 CNGA1P29973 690 aa18.92■□□□□ 0.62
APP-211ENST00000462267 IL15P40933 162 aaPredicted RBP18.92■□□□□ 0.62
APP-211ENST00000462267 GSTO1P78417 241 aa18.92■□□□□ 0.62
APP-211ENST00000462267 ARRDC4Q8NCT1 418 aa18.92■□□□□ 0.62
APP-211ENST00000462267 BADQ92934 168 aa18.92■□□□□ 0.62
APP-211ENST00000462267 PI4KBQ9UBF8 816 aa18.92■□□□□ 0.62
APP-211ENST00000462267 ATAD5Q96QE3 1844 aa18.92■□□□□ 0.62
APP-211ENST00000462267 FRMPD3Q5JV73 1810 aa18.91■□□□□ 0.62
APP-211ENST00000462267 USP17L10C9JJH3 530 aa18.91■□□□□ 0.62
APP-211ENST00000462267 ADORA1P30542 326 aa18.91■□□□□ 0.62
APP-211ENST00000462267 PLA2G5P39877 138 aa18.91■□□□□ 0.62
APP-211ENST00000462267 CCNA1P78396 465 aa18.91■□□□□ 0.62
APP-211ENST00000462267 CCDC184Q52MB2 194 aa18.91■□□□□ 0.62
APP-211ENST00000462267 SLC39A5Q6ZMH5 540 aa18.91■□□□□ 0.62
APP-211ENST00000462267 PRDM5Q9NQX1 630 aaPredicted RBP18.91■□□□□ 0.62
APP-211ENST00000462267 GINM1Q9NU53 330 aa18.91■□□□□ 0.62
APP-211ENST00000462267 FLRT1Q9NZU1 646 aa18.91■□□□□ 0.62
APP-211ENST00000462267 PTPRCP08575 1304 aa18.91■□□□□ 0.62
APP-211ENST00000462267 SLC15A5A6NIM6 579 aa18.9■□□□□ 0.62
APP-211ENST00000462267 HOXC6P09630 235 aa18.9■□□□□ 0.62
APP-211ENST00000462267 ATP2B2Q01814 1243 aa18.9■□□□□ 0.62
APP-211ENST00000462267 POTEEQ6S8J3 1075 aa18.9■□□□□ 0.62
APP-211ENST00000462267 ZNF384Q8TF68 577 aa18.9■□□□□ 0.62
APP-211ENST00000462267 DHX36Q9H2U1 1008 aaKnown RBP18.9■□□□□ 0.62
APP-211ENST00000462267 RABGAP1Q9Y3P9 1069 aa18.9■□□□□ 0.62
APP-211ENST00000462267 SNX17Q15036 470 aa18.89■□□□□ 0.61
APP-211ENST00000462267 RAPGEFL1Q9UHV5 662 aa18.89■□□□□ 0.61
APP-211ENST00000462267 KBTBD13C9JR72 458 aa18.88■□□□□ 0.61
APP-211ENST00000462267 PTPREP23469 700 aa18.88■□□□□ 0.61
APP-211ENST00000462267 GJC2Q5T442 439 aaPredicted RBP18.88■□□□□ 0.61
APP-211ENST00000462267 TEX11Q8IYF3 940 aa18.88■□□□□ 0.61
APP-211ENST00000462267 MRPL50Q8N5N7 158 aaKnown RBP18.88■□□□□ 0.61
APP-211ENST00000462267 USP38Q8NB14 1042 aa18.88■□□□□ 0.61
APP-211ENST00000462267 NSUN4Q96CB9 384 aaKnown RBP18.88■□□□□ 0.61
APP-211ENST00000462267 FAM122AQ96E09 287 aa18.88■□□□□ 0.61
APP-211ENST00000462267 PDLIM7Q9NR12 457 aa18.88■□□□□ 0.61
APP-211ENST00000462267 EMILIN3Q9NT22 766 aa18.88■□□□□ 0.61
APP-211ENST00000462267 CYP2C19P33261 490 aa18.87■□□□□ 0.61
APP-211ENST00000462267 JAG1P78504 1218 aa18.87■□□□□ 0.61
APP-211ENST00000462267 TRIM60Q495X7 471 aa18.87■□□□□ 0.61
APP-211ENST00000462267 C1orf53Q5VUE5 145 aa18.87■□□□□ 0.61
APP-211ENST00000462267 USP17L2Q6R6M4 530 aa18.87■□□□□ 0.61
APP-211ENST00000462267 FOXP4Q8IVH2 680 aaPredicted RBP18.87■□□□□ 0.61
APP-211ENST00000462267 RNPC3Q96LT9 517 aaKnown RBP18.87■□□□□ 0.61
APP-211ENST00000462267 IVNS1ABPQ9Y6Y0 642 aa18.87■□□□□ 0.61
APP-211ENST00000462267 CNMDO75829 334 aa18.86■□□□□ 0.61
APP-211ENST00000462267 IGHA2P01877 340 aa18.86■□□□□ 0.61
APP-211ENST00000462267 CYBAP13498 195 aa18.86■□□□□ 0.61
APP-211ENST00000462267 TIMM10P62072 90 aa18.86■□□□□ 0.61
APP-211ENST00000462267 GRB14Q14449 540 aa18.86■□□□□ 0.61
APP-211ENST00000462267 MVPQ14764 893 aaKnown RBP18.86■□□□□ 0.61
APP-211ENST00000462267 GRIN2CQ14957 1233 aa18.86■□□□□ 0.61
APP-211ENST00000462267 WDR78Q5VTH9 848 aa18.86■□□□□ 0.61
APP-211ENST00000462267 METTL16Q86W50 562 aaKnown RBP18.86■□□□□ 0.61
APP-211ENST00000462267 TRPV1Q8NER1 839 aa18.86■□□□□ 0.61
APP-211ENST00000462267 ATXN2LQ8WWM7 1075 aaKnown RBP18.86■□□□□ 0.61
APP-211ENST00000462267 NDUFB9Q9Y6M9 179 aa18.86■□□□□ 0.61
APP-211ENST00000462267 RLFQ13129 1914 aa18.86■□□□□ 0.61
APP-211ENST00000462267 TRIM43BA6NCK2 446 aa18.85■□□□□ 0.61
APP-211ENST00000462267 SH3RF1Q7Z6J0 888 aa18.85■□□□□ 0.61
APP-211ENST00000462267 TRIM43Q96BQ3 446 aaPredicted RBP18.85■□□□□ 0.61
APP-211ENST00000462267 ZBTB21Q9ULJ3 1066 aa18.85■□□□□ 0.61
APP-211ENST00000462267 NCOR1O75376 2440 aa18.85■□□□□ 0.61
APP-211ENST00000462267 USP17L15C9J2P7 530 aa18.84■□□□□ 0.61
APP-211ENST00000462267 USP17L13C9JLJ4 530 aa18.84■□□□□ 0.61
APP-211ENST00000462267 USP17L11C9JVI0 530 aa18.84■□□□□ 0.61
APP-211ENST00000462267 USP17L18D6R9N7 530 aa18.84■□□□□ 0.61
APP-211ENST00000462267 USP17L22D6RA61 530 aa18.84■□□□□ 0.61
APP-211ENST00000462267 USP17L17D6RBQ6 530 aa18.84■□□□□ 0.61
APP-211ENST00000462267 USP17L19D6RCP7 530 aa18.84■□□□□ 0.61
APP-211ENST00000462267 USP17L20D6RJB6 530 aa18.84■□□□□ 0.61
APP-211ENST00000462267 USP17L24Q0WX57 530 aa18.84■□□□□ 0.61
APP-211ENST00000462267 CRACR2BQ8N4Y2 399 aaPredicted RBP18.84■□□□□ 0.61
APP-211ENST00000462267 NPLOC4Q8TAT6 608 aa18.84■□□□□ 0.61
APP-211ENST00000462267 XAGE2Q96GT9 111 aa18.84■□□□□ 0.61
APP-211ENST00000462267 TRIM34Q9BYJ4 488 aa18.84■□□□□ 0.61
APP-211ENST00000462267 DNAJC18Q9H819 358 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms