RNA–Protein interactions for RNA: ENST00000461874.1

VARS-220, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-220ENST00000461874 BACE1P56817 501 aa22.97■■□□□ 1.27
VARS-220ENST00000461874 PABPC4Q13310 644 aaKnown RBP eCLIP22.97■■□□□ 1.27
VARS-220ENST00000461874 MTMR2Q13614 643 aa22.97■■□□□ 1.27
VARS-220ENST00000461874 TATDN1Q6P1N9 297 aa22.97■■□□□ 1.27
VARS-220ENST00000461874 TTC6Q86TZ1 520 aa22.97■■□□□ 1.27
VARS-220ENST00000461874 RAET1EQ8TD07 263 aa22.97■■□□□ 1.27
VARS-220ENST00000461874 PAG1Q9NWQ8 432 aa22.97■■□□□ 1.27
VARS-220ENST00000461874 SERPINB13Q9UIV8 391 aa22.97■■□□□ 1.27
VARS-220ENST00000461874 MYPNQ86TC9 1320 aa22.97■■□□□ 1.27
VARS-220ENST00000461874 ZNF532Q9HCE3 1301 aa22.97■■□□□ 1.27
VARS-220ENST00000461874 PRKCZQ05513 592 aa22.96■■□□□ 1.27
VARS-220ENST00000461874 ANKRD13CQ8N6S4 541 aa22.96■■□□□ 1.27
VARS-220ENST00000461874 HAUS7Q99871 368 aa22.96■■□□□ 1.27
VARS-220ENST00000461874 C19orf81C9J6K1 198 aa22.95■■□□□ 1.26
VARS-220ENST00000461874 SMARCA5O60264 1052 aaPredicted RBP22.95■■□□□ 1.26
VARS-220ENST00000461874 CRNKL1Q9BZJ0 848 aaKnown RBP22.95■■□□□ 1.26
VARS-220ENST00000461874 ASCC2Q9H1I8 757 aaPredicted RBP22.95■■□□□ 1.26
VARS-220ENST00000461874 TMOD4Q9NZQ9 345 aa22.95■■□□□ 1.26
VARS-220ENST00000461874 ATAD5Q96QE3 1844 aa22.94■■□□□ 1.26
VARS-220ENST00000461874 MKI67P46013 3256 aaKnown RBP22.94■■□□□ 1.26
VARS-220ENST00000461874 USP17L10C9JJH3 530 aa22.94■■□□□ 1.26
VARS-220ENST00000461874 MYCP01106 439 aaPredicted RBP22.94■■□□□ 1.26
VARS-220ENST00000461874 GH2P01242 217 aa22.94■■□□□ 1.26
VARS-220ENST00000461874 GRK4P32298 578 aa22.94■■□□□ 1.26
VARS-220ENST00000461874 GCLCP48506 637 aaPredicted RBP22.94■■□□□ 1.26
VARS-220ENST00000461874 PLCD1P51178 756 aa22.94■■□□□ 1.26
VARS-220ENST00000461874 FAM110CQ1W6H9 321 aa22.94■■□□□ 1.26
VARS-220ENST00000461874 DCTPP1Q9H773 170 aa22.94■■□□□ 1.26
VARS-220ENST00000461874 GABRQQ9UN88 632 aa22.94■■□□□ 1.26
VARS-220ENST00000461874 HOXA7P31268 230 aaPredicted RBP22.93■■□□□ 1.26
VARS-220ENST00000461874 LOC285556D6RIA3 1793 aa22.92■■□□□ 1.26
VARS-220ENST00000461874 TNPO2O14787 897 aaKnown RBP22.92■■□□□ 1.26
VARS-220ENST00000461874 POLR3DP05423 398 aaPredicted RBP22.92■■□□□ 1.26
VARS-220ENST00000461874 ADD2P35612 726 aa22.92■■□□□ 1.26
VARS-220ENST00000461874 LCORLQ8N3X6 602 aa22.92■■□□□ 1.26
VARS-220ENST00000461874 RBBP6Q7Z6E9 1792 aaKnown RBP22.91■■□□□ 1.26
VARS-220ENST00000461874 MYH1P12882 1939 aa22.91■■□□□ 1.26
VARS-220ENST00000461874 SHMT1P34896 483 aa22.91■■□□□ 1.26
VARS-220ENST00000461874 FLT3LGP49771 235 aa22.91■■□□□ 1.26
VARS-220ENST00000461874 MTFR1Q15390 333 aa22.91■■□□□ 1.26
VARS-220ENST00000461874 SLFNL1Q499Z3 407 aa22.91■■□□□ 1.26
VARS-220ENST00000461874 CERKLQ49MI3 558 aaPredicted RBP22.91■■□□□ 1.26
VARS-220ENST00000461874 PRPF38BQ5VTL8 546 aaKnown RBP22.91■■□□□ 1.26
VARS-220ENST00000461874 SDR42E1Q8WUS8 393 aa22.91■■□□□ 1.26
VARS-220ENST00000461874 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.91■■□□□ 1.262e-8■■■■□ 19.5
VARS-220ENST00000461874 MCM9Q9NXL9 1143 aa22.91■■□□□ 1.26
VARS-220ENST00000461874 IRX3P78415 501 aaPredicted RBP22.9■■□□□ 1.26
VARS-220ENST00000461874 GABPAQ06546 454 aa22.9■■□□□ 1.26
VARS-220ENST00000461874 ABCB5Q2M3G0 1257 aa22.9■■□□□ 1.26
VARS-220ENST00000461874 SLAIN1Q8ND83 568 aa22.9■■□□□ 1.26
VARS-220ENST00000461874 P2RX7Q99572 595 aaKnown RBP22.9■■□□□ 1.26
VARS-220ENST00000461874 ARMT1Q9H993 441 aa22.9■■□□□ 1.26
VARS-220ENST00000461874 DCP1AQ9NPI6 582 aaPredicted RBP22.9■■□□□ 1.26
VARS-220ENST00000461874 EMILIN3Q9NT22 766 aa22.9■■□□□ 1.26
VARS-220ENST00000461874 ECHDC1Q9NTX5 307 aa22.9■■□□□ 1.26
VARS-220ENST00000461874 UBE3CQ15386 1083 aa22.89■■□□□ 1.25
VARS-220ENST00000461874 USP17L2Q6R6M4 530 aa22.89■■□□□ 1.25
VARS-220ENST00000461874 COA7Q96BR5 231 aa22.89■■□□□ 1.25
VARS-220ENST00000461874 ADCY3O60266 1144 aa22.88■■□□□ 1.25
VARS-220ENST00000461874 MBD4O95243 580 aa22.88■■□□□ 1.25
VARS-220ENST00000461874 EVX2Q03828 476 aa22.88■■□□□ 1.25
VARS-220ENST00000461874 IRF5Q13568 498 aa22.88■■□□□ 1.25
VARS-220ENST00000461874 RAB3GAP1Q15042 981 aa22.88■■□□□ 1.25
VARS-220ENST00000461874 CABP5Q9NP86 173 aa22.88■■□□□ 1.25
VARS-220ENST00000461874 MORF4L1Q9UBU8 362 aa22.88■■□□□ 1.25
VARS-220ENST00000461874 BIN2Q9UBW5 565 aaPredicted RBP22.88■■□□□ 1.25
VARS-220ENST00000461874 PRKAB2O43741 272 aa22.87■■□□□ 1.25
VARS-220ENST00000461874 CHGBP05060 677 aa22.87■■□□□ 1.25
VARS-220ENST00000461874 UBXN2AP68543 259 aa22.87■■□□□ 1.25
VARS-220ENST00000461874 PXYLP1Q8TE99 480 aa22.87■■□□□ 1.25
VARS-220ENST00000461874 ATP8A2Q9NTI2 1148 aa22.87■■□□□ 1.25
VARS-220ENST00000461874 PCDHB15Q9Y5E8 787 aa22.87■■□□□ 1.25
VARS-220ENST00000461874 MGAMO43451 1857 aa22.87■■□□□ 1.25
VARS-220ENST00000461874 CYP2D6P10635 497 aa22.86■■□□□ 1.25
VARS-220ENST00000461874 CCL5P13501 91 aa22.86■■□□□ 1.25
VARS-220ENST00000461874 RRP1P56182 461 aaKnown RBP22.86■■□□□ 1.25
VARS-220ENST00000461874 HERVK_113P62684 666 aa22.86■■□□□ 1.25
VARS-220ENST00000461874 C12orf42Q96LP6 360 aa22.86■■□□□ 1.25
VARS-220ENST00000461874 DDX60LQ5H9U9 1706 aaKnown RBP22.85■■□□□ 1.25
VARS-220ENST00000461874 ELNP15502 786 aa22.85■■□□□ 1.25
VARS-220ENST00000461874 GUCY1A2P33402 732 aa22.85■■□□□ 1.25
VARS-220ENST00000461874 USP14P54578 494 aa22.85■■□□□ 1.25
VARS-220ENST00000461874 ZSCAN25Q6NSZ9 544 aa22.85■■□□□ 1.25
VARS-220ENST00000461874 ACER1Q8TDN7 264 aa22.85■■□□□ 1.25
VARS-220ENST00000461874 FEZ1Q99689 392 aa22.85■■□□□ 1.25
VARS-220ENST00000461874 KIAA1683Q9H0B3 1180 aa22.85■■□□□ 1.25
VARS-220ENST00000461874 TXNRD2Q9NNW7 524 aa22.85■■□□□ 1.25
VARS-220ENST00000461874 TAOK2Q9UL54 1235 aa22.85■■□□□ 1.25
VARS-220ENST00000461874 GJB1P08034 283 aa22.84■■□□□ 1.25
VARS-220ENST00000461874 ZYXQ15942 572 aaKnown RBP22.84■■□□□ 1.25
VARS-220ENST00000461874 GPRC5AQ8NFJ5 357 aa22.84■■□□□ 1.25
VARS-220ENST00000461874 GPATCH3Q96I76 525 aa22.84■■□□□ 1.25
VARS-220ENST00000461874 RNF208Q9H0X6 261 aa22.84■■□□□ 1.25
VARS-220ENST00000461874 RBPJLQ9UBG7 517 aa22.84■■□□□ 1.25
VARS-220ENST00000461874 GJD2Q9UKL4 321 aa22.84■■□□□ 1.25
VARS-220ENST00000461874 PEX10O60683 326 aa22.83■■□□□ 1.25
VARS-220ENST00000461874 SEPT2Q15019 361 aa22.83■■□□□ 1.25
VARS-220ENST00000461874 NKX2-3Q8TAU0 364 aa22.83■■□□□ 1.25
VARS-220ENST00000461874 GTF3C2Q8WUA4 911 aaPredicted RBP22.83■■□□□ 1.25
VARS-220ENST00000461874 SHISA4Q96DD7 197 aa22.83■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms