RNA–Protein interactions for RNA: ENST00000461394.5

MSH2-204, Transcript of mutS homolog 2, humanhuman

TSL 3

Gene MSH2, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-204ENST00000461394 TNKSO95271 1327 aa7.92□□□□□ -1.14
MSH2-204ENST00000461394 FAM205AQ6ZU69 1335 aa7.92□□□□□ -1.14
MSH2-204ENST00000461394 FOCADQ5VW36 1801 aa7.92□□□□□ -1.14
MSH2-204ENST00000461394 CCDC196A0A1B0GTZ2 297 aa7.91□□□□□ -1.14
MSH2-204ENST00000461394 TRIM66O15016 1216 aa7.91□□□□□ -1.14
MSH2-204ENST00000461394 ECE2O60344 883 aa7.91□□□□□ -1.14
MSH2-204ENST00000461394 GADD45BO75293 160 aaPredicted RBP7.91□□□□□ -1.14
MSH2-204ENST00000461394 SCNN1DP51172 638 aa7.91□□□□□ -1.14
MSH2-204ENST00000461394 RBM5P52756 815 aaKnown RBP eCLIP7.91□□□□□ -1.14
MSH2-204ENST00000461394 UBE2HP62256 183 aa7.91□□□□□ -1.14
MSH2-204ENST00000461394 CEBPZQ03701 1054 aaKnown RBP7.91□□□□□ -1.14
MSH2-204ENST00000461394 RESTQ13127 1097 aa7.91□□□□□ -1.14
MSH2-204ENST00000461394 PICALMQ13492 652 aa7.91□□□□□ -1.14
MSH2-204ENST00000461394 SBK1Q52WX2 424 aa7.91□□□□□ -1.14
MSH2-204ENST00000461394 FAM47AQ5JRC9 791 aa7.91□□□□□ -1.14
MSH2-204ENST00000461394 FAM173BQ6P4H8 233 aa7.91□□□□□ -1.14
MSH2-204ENST00000461394 SGMS1Q86VZ5 419 aa7.91□□□□□ -1.14
MSH2-204ENST00000461394 ZNF654Q8IZM8 581 aa7.91□□□□□ -1.14
MSH2-204ENST00000461394 ZNF444Q8N0Y2 327 aaPredicted RBP7.91□□□□□ -1.14
MSH2-204ENST00000461394 NKX2-3Q8TAU0 364 aa7.91□□□□□ -1.14
MSH2-204ENST00000461394 GPT2Q8TD30 523 aa7.91□□□□□ -1.14
MSH2-204ENST00000461394 WASF1Q92558 559 aa7.91□□□□□ -1.14
MSH2-204ENST00000461394 PHKBQ93100 1093 aa7.91□□□□□ -1.14
MSH2-204ENST00000461394 DDX27Q96GQ7 796 aaKnown RBP7.91□□□□□ -1.14
MSH2-204ENST00000461394 MTA3Q9BTC8 594 aa7.91□□□□□ -1.14
MSH2-204ENST00000461394 RTFDC1Q9BY42 306 aaPredicted RBP7.91□□□□□ -1.14
MSH2-204ENST00000461394 ZNF287Q9HBT7 754 aa7.91□□□□□ -1.14
MSH2-204ENST00000461394 TFIP11Q9UBB9 837 aaKnown RBP7.91□□□□□ -1.14
MSH2-204ENST00000461394 CFAP45Q9UL16 551 aa7.91□□□□□ -1.14
MSH2-204ENST00000461394 HPS5Q9UPZ3 1129 aa7.91□□□□□ -1.14
MSH2-204ENST00000461394 ADAMTSL1Q8N6G6 1762 aa7.91□□□□□ -1.14
MSH2-204ENST00000461394 GPR75-ASB3A0A0A6YYF3 556 aa7.9□□□□□ -1.14
MSH2-204ENST00000461394 SMIM22K7EJ46 135 aa7.9□□□□□ -1.14
MSH2-204ENST00000461394 PPIP5K2O43314 1243 aa7.9□□□□□ -1.14
MSH2-204ENST00000461394 C21orf2O43822 256 aa7.9□□□□□ -1.14
MSH2-204ENST00000461394 ORC4O43929 436 aa7.9□□□□□ -1.14
MSH2-204ENST00000461394 TSPY3P0CV98 308 aa7.9□□□□□ -1.14
MSH2-204ENST00000461394 TSPY8P0CW00 308 aa7.9□□□□□ -1.14
MSH2-204ENST00000461394 CALM1P0DP23 149 aa7.9□□□□□ -1.14
MSH2-204ENST00000461394 CALM2P0DP24 149 aa7.9□□□□□ -1.14
MSH2-204ENST00000461394 CALM3P0DP25 149 aa7.9□□□□□ -1.14
MSH2-204ENST00000461394 POLD1P28340 1107 aa7.9□□□□□ -1.14
MSH2-204ENST00000461394 CDC27P30260 824 aa7.9□□□□□ -1.14
MSH2-204ENST00000461394 ADD1P35611 737 aaKnown RBP7.9□□□□□ -1.14
MSH2-204ENST00000461394 PPP4CP60510 307 aa7.9□□□□□ -1.14
MSH2-204ENST00000461394 AOC3Q16853 763 aa7.9□□□□□ -1.14
MSH2-204ENST00000461394 RBM26Q5T8P6 1007 aaKnown RBP7.9□□□□□ -1.14
MSH2-204ENST00000461394 OTUD7BQ6GQQ9 843 aa7.9□□□□□ -1.14
MSH2-204ENST00000461394 CCDC82Q8N4S0 544 aa7.9□□□□□ -1.14
MSH2-204ENST00000461394 TTLL6Q8N841 843 aa7.9□□□□□ -1.14
MSH2-204ENST00000461394 TMEM87AQ8NBN3 555 aa7.9□□□□□ -1.14
MSH2-204ENST00000461394 BICD2Q8TD16 824 aa7.9□□□□□ -1.14
MSH2-204ENST00000461394 TEKT1Q969V4 418 aa7.9□□□□□ -1.14
MSH2-204ENST00000461394 DYNLL2Q96FJ2 89 aa7.9□□□□□ -1.14
MSH2-204ENST00000461394 MXD3Q9BW11 206 aa7.9□□□□□ -1.14
MSH2-204ENST00000461394 SCAND2PQ9GZW5 306 aaPredicted RBP7.9□□□□□ -1.14
MSH2-204ENST00000461394 KAT14Q9H8E8 782 aa7.9□□□□□ -1.14
MSH2-204ENST00000461394 PPP1R1BQ9UD71 204 aaPredicted RBP7.9□□□□□ -1.14
MSH2-204ENST00000461394 SUGT1Q9Y2Z0 365 aa7.9□□□□□ -1.14
MSH2-204ENST00000461394 DAGLAQ9Y4D2 1042 aa7.9□□□□□ -1.14
MSH2-204ENST00000461394 C10orf71Q711Q0 1435 aa7.89□□□□□ -1.15
MSH2-204ENST00000461394 FLT1P17948 1338 aa7.89□□□□□ -1.15
MSH2-204ENST00000461394 ZBTB7AO95365 584 aa7.89□□□□□ -1.15
MSH2-204ENST00000461394 FMNL1O95466 1100 aaPredicted RBP7.89□□□□□ -1.15
MSH2-204ENST00000461394 TFAP4Q01664 338 aa7.89□□□□□ -1.15
MSH2-204ENST00000461394 SAFBQ15424 915 aaKnown RBP eCLIP7.89□□□□□ -1.15
MSH2-204ENST00000461394 SF3A1Q15459 793 aaKnown RBP7.89□□□□□ -1.15
MSH2-204ENST00000461394 ZSCAN23Q3MJ62 389 aa7.89□□□□□ -1.15
MSH2-204ENST00000461394 CCDC93Q567U6 631 aa7.89□□□□□ -1.15
MSH2-204ENST00000461394 CCDC178Q5BJE1 867 aa7.89□□□□□ -1.15
MSH2-204ENST00000461394 C12orf60Q5U649 245 aa7.89□□□□□ -1.15
MSH2-204ENST00000461394 CC2D2BQ6DHV5 1058 aa7.89□□□□□ -1.15
MSH2-204ENST00000461394 PODNQ7Z5L7 613 aa7.89□□□□□ -1.15
MSH2-204ENST00000461394 EFCAB3Q8N7B9 438 aa7.89□□□□□ -1.15
MSH2-204ENST00000461394 ENAHQ8N8S7 591 aaPredicted RBP7.89□□□□□ -1.15
MSH2-204ENST00000461394 FANCBQ8NB91 859 aa7.89□□□□□ -1.15
MSH2-204ENST00000461394 CTCFLQ8NI51 663 aaPredicted RBP7.89□□□□□ -1.15
MSH2-204ENST00000461394 SLC16A10Q8TF71 515 aa7.89□□□□□ -1.15
MSH2-204ENST00000461394 TRIM34Q9BYJ4 488 aa7.89□□□□□ -1.15
MSH2-204ENST00000461394 PDGFDQ9GZP0 370 aaPredicted RBP7.89□□□□□ -1.15
MSH2-204ENST00000461394 USP40Q9NVE5 1235 aa7.89□□□□□ -1.15
MSH2-204ENST00000461394 RBM28Q9NW13 759 aaKnown RBP7.89□□□□□ -1.15
MSH2-204ENST00000461394 MTMR7Q9Y216 660 aa7.89□□□□□ -1.15
MSH2-204ENST00000461394 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.89□□□□□ -1.15
MSH2-204ENST00000461394 GAKO14976 1311 aa7.88□□□□□ -1.15
MSH2-204ENST00000461394 STK36Q9NRP7 1315 aa7.88□□□□□ -1.15
MSH2-204ENST00000461394 SYCE3A1L190 88 aa7.88□□□□□ -1.15
MSH2-204ENST00000461394 USP17L3A6NCW0 530 aa7.88□□□□□ -1.15
MSH2-204ENST00000461394 USP17L4A6NCW7 530 aa7.88□□□□□ -1.15
MSH2-204ENST00000461394 NMT2O60551 498 aa7.88□□□□□ -1.15
MSH2-204ENST00000461394 DDAH1O94760 285 aa7.88□□□□□ -1.15
MSH2-204ENST00000461394 HLA-DOAP06340 250 aa7.88□□□□□ -1.15
MSH2-204ENST00000461394 FDPSP14324 419 aaKnown RBP7.88□□□□□ -1.15
MSH2-204ENST00000461394 DPEP1P16444 411 aa7.88□□□□□ -1.15
MSH2-204ENST00000461394 XBP1P17861 261 aa7.88□□□□□ -1.15
MSH2-204ENST00000461394 EVX2Q03828 476 aa7.88□□□□□ -1.15
MSH2-204ENST00000461394 MKRN3Q13064 507 aaKnown RBP7.88□□□□□ -1.15
MSH2-204ENST00000461394 CAMK2BQ13554 666 aa7.88□□□□□ -1.15
MSH2-204ENST00000461394 STK38Q15208 465 aa7.88□□□□□ -1.15
MSH2-204ENST00000461394 SEC23AQ15436 765 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms