RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 OXER1Q8TDS5 423 aa17.59■□□□□ 0.41
LMNB1-203ENST00000460265 RIC1Q4ADV7 1423 aa17.58■□□□□ 0.41
LMNB1-203ENST00000460265 CMA1P23946 247 aa17.58■□□□□ 0.41
LMNB1-203ENST00000460265 EFCC1Q9HA90 598 aa17.58■□□□□ 0.41
LMNB1-203ENST00000460265 DHX8Q14562 1220 aaKnown RBP17.58■□□□□ 0.4
LMNB1-203ENST00000460265 DIXDC1Q155Q3 683 aa17.58■□□□□ 0.4
LMNB1-203ENST00000460265 RIMBP2O15034 1052 aa17.57■□□□□ 0.4
LMNB1-203ENST00000460265 FAM196AQ6ZSG2 479 aa17.57■□□□□ 0.4
LMNB1-203ENST00000460265 TRMT44Q8IYL2 757 aaKnown RBP17.57■□□□□ 0.4
LMNB1-203ENST00000460265 KAT14Q9H8E8 782 aa17.57■□□□□ 0.4
LMNB1-203ENST00000460265 PCDHB6Q9Y5E3 794 aa17.57■□□□□ 0.4
LMNB1-203ENST00000460265 TCRBV5S4A2TA0A5A2 114 aa17.57■□□□□ 0.4
LMNB1-203ENST00000460265 VWA3AA6NCI4 1184 aa17.57■□□□□ 0.4
LMNB1-203ENST00000460265 TRIM75PA6NK02 468 aa17.57■□□□□ 0.4
LMNB1-203ENST00000460265 LDHBP07195 334 aaKnown RBP17.57■□□□□ 0.4
LMNB1-203ENST00000460265 MECOMQ03112 1051 aa17.57■□□□□ 0.4
LMNB1-203ENST00000460265 LONRF3Q496Y0 759 aa17.57■□□□□ 0.4
LMNB1-203ENST00000460265 ZSCAN10Q96SZ4 725 aaPredicted RBP17.57■□□□□ 0.4
LMNB1-203ENST00000460265 KCPQ6ZWJ8 1503 aa17.57■□□□□ 0.4
LMNB1-203ENST00000460265 MCM7P33993 719 aa17.57■□□□□ 0.4
LMNB1-203ENST00000460265 FAM193AP78312 1265 aa17.57■□□□□ 0.4
LMNB1-203ENST00000460265 CNBD1Q8NA66 436 aa17.57■□□□□ 0.4
LMNB1-203ENST00000460265 SMARCE1Q969G3 411 aa17.57■□□□□ 0.4
LMNB1-203ENST00000460265 PLIN2Q99541 437 aa17.57■□□□□ 0.4
LMNB1-203ENST00000460265 BSDC1Q9NW68 430 aaPredicted RBP17.57■□□□□ 0.4
LMNB1-203ENST00000460265 THRAP3Q9Y2W1 955 aaKnown RBP17.57■□□□□ 0.4
LMNB1-203ENST00000460265 FOXN1O15353 648 aa17.56■□□□□ 0.4
LMNB1-203ENST00000460265 PLEKHA8P1O95397 391 aa17.56■□□□□ 0.4
LMNB1-203ENST00000460265 LIFRP42702 1097 aa17.56■□□□□ 0.4
LMNB1-203ENST00000460265 MAPKAPK5Q8IW41 473 aa17.56■□□□□ 0.4
LMNB1-203ENST00000460265 CCAR2Q8N163 923 aaKnown RBP17.56■□□□□ 0.4
LMNB1-203ENST00000460265 PCDHA5Q9Y5H7 936 aa17.56■□□□□ 0.4
LMNB1-203ENST00000460265 JCADQ9P266 1359 aa17.56■□□□□ 0.4
LMNB1-203ENST00000460265 PHRF1Q9P1Y6 1649 aaKnown RBP17.56■□□□□ 0.4
LMNB1-203ENST00000460265 STRCP1A6NGW2 1772 aa17.56■□□□□ 0.4
LMNB1-203ENST00000460265 A0A1W2PQ27 194 aa17.56■□□□□ 0.4
LMNB1-203ENST00000460265 A0A1W2PQ64 194 aa17.56■□□□□ 0.4
LMNB1-203ENST00000460265 A0A1W2PQD8 194 aa17.56■□□□□ 0.4
LMNB1-203ENST00000460265 USP17L8P0C7I0 530 aa17.56■□□□□ 0.4
LMNB1-203ENST00000460265 ATP1A3P13637 1013 aa17.56■□□□□ 0.4
LMNB1-203ENST00000460265 KRBA2Q6ZNG9 492 aa17.56■□□□□ 0.4
LMNB1-203ENST00000460265 SERTAD1Q9UHV2 236 aa17.56■□□□□ 0.4
LMNB1-203ENST00000460265 CEP131Q9UPN4 1083 aa17.56■□□□□ 0.4
LMNB1-203ENST00000460265 USP54Q70EL1 1684 aa17.56■□□□□ 0.4
LMNB1-203ENST00000460265 ZNF804BA4D1E1 1349 aa17.56■□□□□ 0.4
LMNB1-203ENST00000460265 IFNAR1P17181 557 aa17.56■□□□□ 0.4
LMNB1-203ENST00000460265 TGFBRAP1Q8WUH2 860 aa17.56■□□□□ 0.4
LMNB1-203ENST00000460265 FAM205CA6NFA0 338 aa17.55■□□□□ 0.4
LMNB1-203ENST00000460265 COBLO75128 1261 aa17.55■□□□□ 0.4
LMNB1-203ENST00000460265 TSPY3P0CV98 308 aa17.55■□□□□ 0.4
LMNB1-203ENST00000460265 TSPY8P0CW00 308 aa17.55■□□□□ 0.4
LMNB1-203ENST00000460265 TFAP4Q01664 338 aa17.55■□□□□ 0.4
LMNB1-203ENST00000460265 GOLGA8FQ08AF8 430 aa17.55■□□□□ 0.4
LMNB1-203ENST00000460265 GOLGA8DPQ0D2H9 430 aa17.55■□□□□ 0.4
LMNB1-203ENST00000460265 PIK3AP1Q6ZUJ8 805 aa17.55■□□□□ 0.4
LMNB1-203ENST00000460265 CRACR2BQ8N4Y2 399 aaPredicted RBP17.55■□□□□ 0.4
LMNB1-203ENST00000460265 ENGASEQ8NFI3 743 aa17.55■□□□□ 0.4
LMNB1-203ENST00000460265 DYNLL2Q96FJ2 89 aa17.55■□□□□ 0.4
LMNB1-203ENST00000460265 ERO1AQ96HE7 468 aa17.55■□□□□ 0.4
LMNB1-203ENST00000460265 ARFGEF2Q9Y6D5 1785 aa17.55■□□□□ 0.4
LMNB1-203ENST00000460265 PICALMQ13492 652 aa17.55■□□□□ 0.4
LMNB1-203ENST00000460265 RILPL1Q5EBL4 403 aa17.55■□□□□ 0.4
LMNB1-203ENST00000460265 SAMD1Q6SPF0 538 aaPredicted RBP17.55■□□□□ 0.4
LMNB1-203ENST00000460265 TXNRD3Q86VQ6 643 aa17.55■□□□□ 0.4
LMNB1-203ENST00000460265 ARHGEF1Q92888 912 aaKnown RBP17.55■□□□□ 0.4
LMNB1-203ENST00000460265 TMX4Q9H1E5 349 aaPredicted RBP17.55■□□□□ 0.4
LMNB1-203ENST00000460265 LOC102724159A0A0B4J2E5 919 aa17.55■□□□□ 0.4
LMNB1-203ENST00000460265 FMNL1O95466 1100 aaPredicted RBP17.55■□□□□ 0.4
LMNB1-203ENST00000460265 TOP1P11387 765 aaKnown RBP17.55■□□□□ 0.4
LMNB1-203ENST00000460265 NLRP12P59046 1061 aa17.55■□□□□ 0.4
LMNB1-203ENST00000460265 EVX2Q03828 476 aa17.55■□□□□ 0.4
LMNB1-203ENST00000460265 GPS2Q13227 327 aa17.55■□□□□ 0.4
LMNB1-203ENST00000460265 IQCB1Q15051 598 aa17.55■□□□□ 0.4
LMNB1-203ENST00000460265 PWP2Q15269 919 aaKnown RBP17.55■□□□□ 0.4
LMNB1-203ENST00000460265 ZNF512BQ96KM6 892 aaPredicted RBP17.55■□□□□ 0.4
LMNB1-203ENST00000460265 SPATA31A5Q5VU36 1347 aa17.54■□□□□ 0.4
LMNB1-203ENST00000460265 SPATA31A7Q8IWB4 1347 aa17.54■□□□□ 0.4
LMNB1-203ENST00000460265 MARCH6O60337 910 aa17.54■□□□□ 0.4
LMNB1-203ENST00000460265 CLEC4GQ6UXB4 293 aa17.54■□□□□ 0.4
LMNB1-203ENST00000460265 ANKRD2Q9GZV1 360 aa17.54■□□□□ 0.4
LMNB1-203ENST00000460265 SALL1Q9NSC2 1324 aa17.54■□□□□ 0.4
LMNB1-203ENST00000460265 SLU7O95391 586 aaKnown RBP17.54■□□□□ 0.4
LMNB1-203ENST00000460265 CASP1P29466 404 aa17.54■□□□□ 0.4
LMNB1-203ENST00000460265 KRT2P35908 639 aa17.54■□□□□ 0.4
LMNB1-203ENST00000460265 GRIN1Q05586 938 aa17.54■□□□□ 0.4
LMNB1-203ENST00000460265 SHC4Q6S5L8 630 aa17.54■□□□□ 0.4
LMNB1-203ENST00000460265 SYT10Q6XYQ8 523 aa17.54■□□□□ 0.4
LMNB1-203ENST00000460265 ENAHQ8N8S7 591 aaPredicted RBP17.54■□□□□ 0.4
LMNB1-203ENST00000460265 UFL1O94874 794 aa17.53■□□□□ 0.4
LMNB1-203ENST00000460265 CDC25AP30304 524 aa17.53■□□□□ 0.4
LMNB1-203ENST00000460265 FANCCQ00597 558 aa17.53■□□□□ 0.4
LMNB1-203ENST00000460265 TICAM2Q86XR7 235 aa17.53■□□□□ 0.4
LMNB1-203ENST00000460265 MAPK8IP1Q9UQF2 711 aa17.53■□□□□ 0.4
LMNB1-203ENST00000460265 TNS2Q63HR2 1409 aa17.53■□□□□ 0.4
LMNB1-203ENST00000460265 CUTAO60888 179 aa17.53■□□□□ 0.4
LMNB1-203ENST00000460265 MMP1P03956 469 aa17.53■□□□□ 0.4
LMNB1-203ENST00000460265 GOLGA8HP0CJ92 632 aa17.53■□□□□ 0.4
LMNB1-203ENST00000460265 HEATR3Q7Z4Q2 680 aa17.53■□□□□ 0.4
LMNB1-203ENST00000460265 STAG1Q8WVM7 1258 aa17.53■□□□□ 0.4
LMNB1-203ENST00000460265 BAG3O95817 575 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms