RNA–Protein interactions for RNA: ENST00000453285.1

SDC4P-201, Transcript of syndecan 4 pseudogene, humanhuman

BASIC

Gene SDC4P, Length 601 nt, Biotype processed pseudogene, Subcellular localisation Exosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4P-201ENST00000453285 EGFRP00533 1210 aa7.04□□□□□ -1.28
SDC4P-201ENST00000453285 SLURP2P0DP57 97 aa7.04□□□□□ -1.28
SDC4P-201ENST00000453285 FDPSP14324 419 aaKnown RBP7.04□□□□□ -1.28
SDC4P-201ENST00000453285 CDC27P30260 824 aa7.04□□□□□ -1.28
SDC4P-201ENST00000453285 SHMT1P34896 483 aa7.04□□□□□ -1.28
SDC4P-201ENST00000453285 NOVP48745 357 aa7.04□□□□□ -1.28
SDC4P-201ENST00000453285 GMPSP49915 693 aaPredicted RBP7.04□□□□□ -1.28
SDC4P-201ENST00000453285 NUCB2P80303 420 aa7.04□□□□□ -1.28
SDC4P-201ENST00000453285 TFAP4Q01664 338 aa7.04□□□□□ -1.28
SDC4P-201ENST00000453285 TCP10Q12799 353 aa7.04□□□□□ -1.28
SDC4P-201ENST00000453285 NTRK3Q16288 839 aa7.04□□□□□ -1.28
SDC4P-201ENST00000453285 SPDYE2Q495Y8 402 aa7.04□□□□□ -1.28
SDC4P-201ENST00000453285 FKBP1CQ5VVH2 108 aa7.04□□□□□ -1.28
SDC4P-201ENST00000453285 METTL16Q86W50 562 aaKnown RBP7.04□□□□□ -1.28
SDC4P-201ENST00000453285 RAB11FIP4Q86YS3 637 aa7.04□□□□□ -1.28
SDC4P-201ENST00000453285 ZNF444Q8N0Y2 327 aaPredicted RBP7.04□□□□□ -1.28
SDC4P-201ENST00000453285 OGFOD1Q8N543 542 aa7.04□□□□□ -1.28
SDC4P-201ENST00000453285 NSUN7Q8NE18 718 aaKnown RBP7.04□□□□□ -1.28
SDC4P-201ENST00000453285 NEDD1Q8NHV4 660 aa7.04□□□□□ -1.28
SDC4P-201ENST00000453285 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.04□□□□□ -1.28
SDC4P-201ENST00000453285 EHD4Q9H223 541 aa7.04□□□□□ -1.28
SDC4P-201ENST00000453285 DHX36Q9H2U1 1008 aaKnown RBP7.04□□□□□ -1.28
SDC4P-201ENST00000453285 DNAJC18Q9H819 358 aa7.04□□□□□ -1.28
SDC4P-201ENST00000453285 MKNK2Q9HBH9 465 aa7.04□□□□□ -1.28
SDC4P-201ENST00000453285 MYOZ2Q9NPC6 264 aa7.04□□□□□ -1.28
SDC4P-201ENST00000453285 PGAP2Q9UHJ9 254 aa7.04□□□□□ -1.28
SDC4P-201ENST00000453285 SMCHD1A6NHR9 2005 aa7.04□□□□□ -1.28
SDC4P-201ENST00000453285 SCN4AP35499 1836 aa7.04□□□□□ -1.28
SDC4P-201ENST00000453285 IGKV6D-41A0A0C4DH26 115 aa7.03□□□□□ -1.28
SDC4P-201ENST00000453285 CLRN2A0PK11 232 aa7.03□□□□□ -1.28
SDC4P-201ENST00000453285 ERICH2A1L162 156 aa7.03□□□□□ -1.28
SDC4P-201ENST00000453285 CCDC69A6NI79 296 aa7.03□□□□□ -1.28
SDC4P-201ENST00000453285 TSPY2A6NKD2 308 aa7.03□□□□□ -1.28
SDC4P-201ENST00000453285 GOLGA8BA8MQT2 603 aa7.03□□□□□ -1.28
SDC4P-201ENST00000453285 ZBTB43O43298 467 aa7.03□□□□□ -1.28
SDC4P-201ENST00000453285 RXRAP19793 462 aa7.03□□□□□ -1.28
SDC4P-201ENST00000453285 SYT1P21579 422 aa7.03□□□□□ -1.28
SDC4P-201ENST00000453285 ADD1P35611 737 aaKnown RBP7.03□□□□□ -1.28
SDC4P-201ENST00000453285 RCAN1P53805 252 aa7.03□□□□□ -1.28
SDC4P-201ENST00000453285 TROAPQ12815 778 aa7.03□□□□□ -1.28
SDC4P-201ENST00000453285 SART3Q15020 963 aaKnown RBP7.03□□□□□ -1.28
SDC4P-201ENST00000453285 NBPF9Q3BBW0 867 aa7.03□□□□□ -1.28
SDC4P-201ENST00000453285 CLEC17AQ6ZS10 378 aa7.03□□□□□ -1.28
SDC4P-201ENST00000453285 IQCA1Q86XH1 822 aa7.03□□□□□ -1.28
SDC4P-201ENST00000453285 DGKHQ86XP1 1220 aa7.03□□□□□ -1.28
SDC4P-201ENST00000453285 FOXP4Q8IVH2 680 aaPredicted RBP7.03□□□□□ -1.28
SDC4P-201ENST00000453285 ZNF654Q8IZM8 581 aa7.03□□□□□ -1.28
SDC4P-201ENST00000453285 FAM151AQ8WW52 585 aa7.03□□□□□ -1.28
SDC4P-201ENST00000453285 TNPO1Q92973 898 aaKnown RBP7.03□□□□□ -1.28
SDC4P-201ENST00000453285 UBAC1Q9BSL1 405 aa7.03□□□□□ -1.28
SDC4P-201ENST00000453285 MYL10Q9BUA6 226 aa7.03□□□□□ -1.28
SDC4P-201ENST00000453285 ZNF287Q9HBT7 754 aa7.03□□□□□ -1.28
SDC4P-201ENST00000453285 PI4KBQ9UBF8 816 aa7.03□□□□□ -1.28
SDC4P-201ENST00000453285 SWAP70Q9UH65 585 aa7.03□□□□□ -1.28
SDC4P-201ENST00000453285 CNOT7Q9UIV1 285 aaKnown RBP7.03□□□□□ -1.28
SDC4P-201ENST00000453285 SERPINB13Q9UIV8 391 aa7.03□□□□□ -1.28
SDC4P-201ENST00000453285 TAOK2Q9UL54 1235 aa7.03□□□□□ -1.28
SDC4P-201ENST00000453285 NAP1L2Q9ULW6 460 aaPredicted RBP7.03□□□□□ -1.28
SDC4P-201ENST00000453285 SLC12A7Q9Y666 1083 aa7.03□□□□□ -1.28
SDC4P-201ENST00000453285 GJA3Q9Y6H8 435 aa7.03□□□□□ -1.28
SDC4P-201ENST00000453285 PLIN4Q96Q06 1357 aa7.03□□□□□ -1.28
SDC4P-201ENST00000453285 PHIPQ8WWQ0 1821 aa7.03□□□□□ -1.28
SDC4P-201ENST00000453285 PTPDC1A2A3K4 754 aa7.02□□□□□ -1.29
SDC4P-201ENST00000453285 GOLGA8AA7E2F4 631 aa7.02□□□□□ -1.29
SDC4P-201ENST00000453285 TCP10L2B9ZVM9 353 aa7.02□□□□□ -1.29
SDC4P-201ENST00000453285 STX6O43752 255 aa7.02□□□□□ -1.29
SDC4P-201ENST00000453285 HLA-DOAP06340 250 aa7.02□□□□□ -1.29
SDC4P-201ENST00000453285 TSPY3P0CV98 308 aa7.02□□□□□ -1.29
SDC4P-201ENST00000453285 TSPY8P0CW00 308 aa7.02□□□□□ -1.29
SDC4P-201ENST00000453285 AKR1B1P15121 316 aa7.02□□□□□ -1.29
SDC4P-201ENST00000453285 METAP2P50579 478 aaKnown RBP eCLIP7.02□□□□□ -1.29
SDC4P-201ENST00000453285 NFKBIBQ15653 356 aa7.02□□□□□ -1.29
SDC4P-201ENST00000453285 CCDC178Q5BJE1 867 aa7.02□□□□□ -1.29
SDC4P-201ENST00000453285 IFIT1BQ5T764 474 aaKnown RBP7.02□□□□□ -1.29
SDC4P-201ENST00000453285 TATDN1Q6P1N9 297 aa7.02□□□□□ -1.29
SDC4P-201ENST00000453285 NFXL1Q6ZNB6 911 aa7.02□□□□□ -1.29
SDC4P-201ENST00000453285 SAMD7Q7Z3H4 446 aa7.02□□□□□ -1.29
SDC4P-201ENST00000453285 NBPF11Q86T75 865 aa7.02□□□□□ -1.29
SDC4P-201ENST00000453285 FAM83AQ86UY5 434 aa7.02□□□□□ -1.29
SDC4P-201ENST00000453285 MICU3Q86XE3 530 aa7.02□□□□□ -1.29
SDC4P-201ENST00000453285 MICALL2Q8IY33 904 aa7.02□□□□□ -1.29
SDC4P-201ENST00000453285 GPC2Q8N158 579 aa7.02□□□□□ -1.29
SDC4P-201ENST00000453285 FANCBQ8NB91 859 aa7.02□□□□□ -1.29
SDC4P-201ENST00000453285 CHMP4CQ96CF2 233 aa7.02□□□□□ -1.29
SDC4P-201ENST00000453285 DDX11Q96FC9 970 aa7.02□□□□□ -1.29
SDC4P-201ENST00000453285 GPRC5DQ9NZD1 345 aa7.02□□□□□ -1.29
SDC4P-201ENST00000453285 MTMR6Q9Y217 621 aa7.02□□□□□ -1.29
SDC4P-201ENST00000453285 ASTN2O75129 1339 aaPredicted RBP7.01□□□□□ -1.29
SDC4P-201ENST00000453285 DOCK1Q14185 1865 aa7.01□□□□□ -1.29
SDC4P-201ENST00000453285 FAM196BA6NMK8 535 aa7.01□□□□□ -1.29
SDC4P-201ENST00000453285 DHX16O60231 1041 aaKnown RBP7.01□□□□□ -1.29
SDC4P-201ENST00000453285 DDAH1O94760 285 aa7.01□□□□□ -1.29
SDC4P-201ENST00000453285 DDNO94850 711 aaPredicted RBP7.01□□□□□ -1.29
SDC4P-201ENST00000453285 ZSCAN22P10073 491 aaPredicted RBP7.01□□□□□ -1.29
SDC4P-201ENST00000453285 IFNAR1P17181 557 aa7.01□□□□□ -1.29
SDC4P-201ENST00000453285 GUCY1A2P33402 732 aa7.01□□□□□ -1.29
SDC4P-201ENST00000453285 HIRAP54198 1017 aaPredicted RBP7.01□□□□□ -1.29
SDC4P-201ENST00000453285 JAG1P78504 1218 aa7.01□□□□□ -1.29
SDC4P-201ENST00000453285 HMGN5P82970 282 aaKnown RBP7.01□□□□□ -1.29
SDC4P-201ENST00000453285 MAP3K10Q02779 954 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms