RNA–Protein interactions for RNA: ENST00000452776.1

SMCO1-202, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

TSL 1 (best)

Gene SMCO1, Length 1,846 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-202ENST00000452776 IL13P35225 146 aa9.42□□□□□ -0.9
SMCO1-202ENST00000452776 EPHB4P54760 987 aa9.42□□□□□ -0.9
SMCO1-202ENST00000452776 DYNC1I2Q13409 638 aaKnown RBP9.42□□□□□ -0.9
SMCO1-202ENST00000452776 KCNB1Q14721 858 aa9.42□□□□□ -0.9
SMCO1-202ENST00000452776 NR1I3Q14994 352 aa9.42□□□□□ -0.9
SMCO1-202ENST00000452776 PTGISQ16647 500 aa9.42□□□□□ -0.9
SMCO1-202ENST00000452776 NLRP14Q86W24 1093 aa9.42□□□□□ -0.9
SMCO1-202ENST00000452776 CD302Q8IX05 232 aa9.42□□□□□ -0.9
SMCO1-202ENST00000452776 NBPF15Q8N660 670 aa9.42□□□□□ -0.9
SMCO1-202ENST00000452776 TRIML1Q8N9V2 468 aa9.42□□□□□ -0.9
SMCO1-202ENST00000452776 AENQ8WTP8 325 aaKnown RBP9.42□□□□□ -0.9
SMCO1-202ENST00000452776 DPF2Q92785 391 aa9.42□□□□□ -0.9
SMCO1-202ENST00000452776 CAVIN3Q969G5 261 aa9.42□□□□□ -0.9
SMCO1-202ENST00000452776 NEK1Q96PY6 1258 aa9.42□□□□□ -0.9
SMCO1-202ENST00000452776 HAUS4Q9H6D7 363 aa9.42□□□□□ -0.9
SMCO1-202ENST00000452776 SETD1AO15047 1707 aaKnown RBP9.41□□□□□ -0.9
SMCO1-202ENST00000452776 FAM237AA0A1B0GTK4 181 aa9.41□□□□□ -0.9
SMCO1-202ENST00000452776 HMGB1P1B2RPK0 211 aaPredicted RBP9.41□□□□□ -0.9
SMCO1-202ENST00000452776 BIN1O00499 593 aa9.41□□□□□ -0.9
SMCO1-202ENST00000452776 AP1G2O75843 785 aa9.41□□□□□ -0.9
SMCO1-202ENST00000452776 ALDH1L1O75891 902 aa9.41□□□□□ -0.9
SMCO1-202ENST00000452776 SMNDC1O75940 238 aaKnown RBP eCLIP9.41□□□□□ -0.9
SMCO1-202ENST00000452776 GSTA1P08263 222 aa9.41□□□□□ -0.9
SMCO1-202ENST00000452776 TNFRSF8P28908 595 aa9.41□□□□□ -0.9
SMCO1-202ENST00000452776 ADKP55263 362 aaKnown RBP9.41□□□□□ -0.9
SMCO1-202ENST00000452776 IFT88Q13099 833 aa9.41□□□□□ -0.9
SMCO1-202ENST00000452776 TBC1D25Q3MII6 688 aa9.41□□□□□ -0.9
SMCO1-202ENST00000452776 EFCAB2Q5VUJ9 269 aa9.41□□□□□ -0.9
SMCO1-202ENST00000452776 PAPD7Q5XG87 772 aaKnown RBP9.41□□□□□ -0.9
SMCO1-202ENST00000452776 MSL1Q68DK7 614 aa9.41□□□□□ -0.9
SMCO1-202ENST00000452776 CYB5RLQ6IPT4 315 aa9.41□□□□□ -0.9
SMCO1-202ENST00000452776 CYP26C1Q6V0L0 522 aa9.41□□□□□ -0.9
SMCO1-202ENST00000452776 BZW1Q7L1Q6 419 aaKnown RBP9.41□□□□□ -0.9
SMCO1-202ENST00000452776 TRIM74Q86UV6 250 aa9.41□□□□□ -0.9
SMCO1-202ENST00000452776 TRIM73Q86UV7 250 aa9.41□□□□□ -0.9
SMCO1-202ENST00000452776 MMGT1Q8N4V1 131 aa9.41□□□□□ -0.9
SMCO1-202ENST00000452776 RASSF8Q8NHQ8 419 aa9.41□□□□□ -0.9
SMCO1-202ENST00000452776 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.41□□□□□ -0.9
SMCO1-202ENST00000452776 TBC1D31Q96DN5 1066 aa9.41□□□□□ -0.9
SMCO1-202ENST00000452776 BICD1Q96G01 975 aa9.41□□□□□ -0.9
SMCO1-202ENST00000452776 NOP53Q9NZM5 478 aaKnown RBP9.41□□□□□ -0.9
SMCO1-202ENST00000452776 KIF1BO60333 1816 aa9.41□□□□□ -0.9
SMCO1-202ENST00000452776 STXBP3O00186 592 aa9.4□□□□□ -0.9
SMCO1-202ENST00000452776 ERCC5P28715 1186 aaPredicted RBP9.4□□□□□ -0.9
SMCO1-202ENST00000452776 CNGA1P29973 690 aa9.4□□□□□ -0.9
SMCO1-202ENST00000452776 SYKP43405 635 aa9.4□□□□□ -0.9
SMCO1-202ENST00000452776 ATP2B2Q01814 1243 aa9.4□□□□□ -0.9
SMCO1-202ENST00000452776 WASHC4Q2M389 1173 aa9.4□□□□□ -0.9
SMCO1-202ENST00000452776 USPL1Q5W0Q7 1092 aa9.4□□□□□ -0.9
SMCO1-202ENST00000452776 NOA1Q8NC60 698 aaKnown RBP9.4□□□□□ -0.9
SMCO1-202ENST00000452776 FBXW7Q969H0 707 aa9.4□□□□□ -0.9
SMCO1-202ENST00000452776 TSC22D3Q99576 134 aa9.4□□□□□ -0.9
SMCO1-202ENST00000452776 C15orf41Q9Y2V0 281 aa9.4□□□□□ -0.9
SMCO1-202ENST00000452776 RIPOR2Q9Y4F9 1068 aa9.4□□□□□ -0.9
SMCO1-202ENST00000452776 IFT172Q9UG01 1749 aa9.4□□□□□ -0.9
SMCO1-202ENST00000452776 PXDNLA1KZ92 1463 aa9.4□□□□□ -0.9
SMCO1-202ENST00000452776 ITIH6Q6UXX5 1313 aa9.4□□□□□ -0.9
SMCO1-202ENST00000452776 MAP3K15Q6ZN16 1313 aa9.4□□□□□ -0.9
SMCO1-202ENST00000452776 LMTK2Q8IWU2 1503 aa9.4□□□□□ -0.9
SMCO1-202ENST00000452776 A0A1B0GTH6 734 aa9.4□□□□□ -0.91
SMCO1-202ENST00000452776 ANO9A1A5B4 782 aa9.4□□□□□ -0.91
SMCO1-202ENST00000452776 ZNF18P17022 549 aa9.4□□□□□ -0.91
SMCO1-202ENST00000452776 KIF5BP33176 963 aa9.4□□□□□ -0.91
SMCO1-202ENST00000452776 MDH1P40925 334 aaKnown RBP9.4□□□□□ -0.91
SMCO1-202ENST00000452776 SFSWAPQ12872 951 aaKnown RBP9.4□□□□□ -0.91
SMCO1-202ENST00000452776 LAMB3Q13751 1172 aa9.4□□□□□ -0.91
SMCO1-202ENST00000452776 SEPT2Q15019 361 aa9.4□□□□□ -0.91
SMCO1-202ENST00000452776 CCDC181Q5TID7 509 aa9.4□□□□□ -0.91
SMCO1-202ENST00000452776 CCDC102BQ68D86 513 aa9.4□□□□□ -0.91
SMCO1-202ENST00000452776 KANK3Q6NY19 840 aa9.4□□□□□ -0.91
SMCO1-202ENST00000452776 MTHFD1LQ6UB35 978 aa9.4□□□□□ -0.91
SMCO1-202ENST00000452776 FAM81AQ8TBF8 368 aa9.4□□□□□ -0.91
SMCO1-202ENST00000452776 MYCBPAPQ8TBZ2 947 aa9.4□□□□□ -0.91
SMCO1-202ENST00000452776 PARD3BQ8TEW8 1205 aa9.4□□□□□ -0.91
SMCO1-202ENST00000452776 ZBTB10Q96DT7 871 aa9.4□□□□□ -0.91
SMCO1-202ENST00000452776 ACSBG1Q96GR2 724 aa9.4□□□□□ -0.91
SMCO1-202ENST00000452776 JPH4Q96JJ6 628 aa9.4□□□□□ -0.91
SMCO1-202ENST00000452776 IL1RAPL2Q9NP60 686 aa9.4□□□□□ -0.91
SMCO1-202ENST00000452776 PAPOLBQ9NRJ5 636 aaKnown RBP9.4□□□□□ -0.91
SMCO1-202ENST00000452776 EME2A4GXA9 379 aaPredicted RBP9.39□□□□□ -0.91
SMCO1-202ENST00000452776 GMNCA6NCL1 334 aa9.39□□□□□ -0.91
SMCO1-202ENST00000452776 TMEM232C9JQI7 657 aa9.39□□□□□ -0.91
SMCO1-202ENST00000452776 JAK2O60674 1132 aa9.39□□□□□ -0.91
SMCO1-202ENST00000452776 PPP6R2O75170 966 aa9.39□□□□□ -0.91
SMCO1-202ENST00000452776 ATP6V1G2O95670 118 aa9.39□□□□□ -0.91
SMCO1-202ENST00000452776 RPSAP08865 295 aaKnown RBP9.39□□□□□ -0.91
SMCO1-202ENST00000452776 HMOX1P09601 288 aa9.39□□□□□ -0.91
SMCO1-202ENST00000452776 PIP4K2AP48426 406 aaPredicted RBP9.39□□□□□ -0.91
SMCO1-202ENST00000452776 SH3BGRP55822 239 aaPredicted RBP9.39□□□□□ -0.91
SMCO1-202ENST00000452776 KRT83P78385 493 aa9.39□□□□□ -0.91
SMCO1-202ENST00000452776 STK3Q13188 491 aa9.39□□□□□ -0.91
SMCO1-202ENST00000452776 BLMHQ13867 455 aa9.39□□□□□ -0.91
SMCO1-202ENST00000452776 LRRC23Q53EV4 343 aaPredicted RBP9.39□□□□□ -0.91
SMCO1-202ENST00000452776 ANKRD20A8PQ5CZ79 823 aa9.39□□□□□ -0.91
SMCO1-202ENST00000452776 CACNA2D4Q7Z3S7 1137 aa9.39□□□□□ -0.91
SMCO1-202ENST00000452776 ARHGAP22Q7Z5H3 698 aa9.39□□□□□ -0.91
SMCO1-202ENST00000452776 NSMCE1Q8WV22 266 aa9.39□□□□□ -0.91
SMCO1-202ENST00000452776 EZH1Q92800 747 aaPredicted RBP9.39□□□□□ -0.91
SMCO1-202ENST00000452776 ZNF274Q96GC6 653 aaPredicted RBP9.39□□□□□ -0.91
SMCO1-202ENST00000452776 DESI2Q9BSY9 194 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms