RNA–Protein interactions for RNA: ENST00000449476.6

CTC1-202, Transcript of CST telomere replication complex component 1, humanhuman

TSL 2

Gene CTC1, Length 4,797 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-202ENST00000449476 SNX29Q8TEQ0 813 aa11.67□□□□□ -0.54
CTC1-202ENST00000449476 TSC1Q92574 1164 aa11.67□□□□□ -0.54
CTC1-202ENST00000449476 RASAL2Q9UJF2 1139 aa11.67□□□□□ -0.54
CTC1-202ENST00000449476 LMTK3Q96Q04 1460 aa11.67□□□□□ -0.54
CTC1-202ENST00000449476 CPSF1Q10570 1443 aaKnown RBP11.66□□□□□ -0.54
CTC1-202ENST00000449476 ACTN2P35609 894 aa11.66□□□□□ -0.54
CTC1-202ENST00000449476 NDUFA8P51970 172 aa11.66□□□□□ -0.54
CTC1-202ENST00000449476 POLA2Q14181 598 aa11.66□□□□□ -0.54
CTC1-202ENST00000449476 UBE3CQ15386 1083 aa11.66□□□□□ -0.54
CTC1-202ENST00000449476 TGFBRAP1Q8WUH2 860 aa11.66□□□□□ -0.54
CTC1-202ENST00000449476 MAP3K15Q6ZN16 1313 aa11.66□□□□□ -0.54
CTC1-202ENST00000449476 MAP3K4Q9Y6R4 1608 aa11.66□□□□□ -0.54
CTC1-202ENST00000449476 SASH1O94885 1247 aa11.66□□□□□ -0.54
CTC1-202ENST00000449476 FAM98CQ17RN3 349 aaKnown RBP11.66□□□□□ -0.54
CTC1-202ENST00000449476 MRFAP1L1Q96HT8 127 aa11.66□□□□□ -0.54
CTC1-202ENST00000449476 ZBTB21Q9ULJ3 1066 aa11.66□□□□□ -0.54
CTC1-202ENST00000449476 TNNC1P63316 161 aa11.66□□□□□ -0.54
CTC1-202ENST00000449476 GIGYF2Q6Y7W6 1299 aaKnown RBP11.66□□□□□ -0.54
CTC1-202ENST00000449476 PI4K2BQ8TCG2 481 aa11.66□□□□□ -0.54
CTC1-202ENST00000449476 NELFBQ8WX92 580 aa11.66□□□□□ -0.54
CTC1-202ENST00000449476 ABCC3O15438 1527 aa11.66□□□□□ -0.54
CTC1-202ENST00000449476 CETN3O15182 167 aa11.66□□□□□ -0.54
CTC1-202ENST00000449476 CIAO1O76071 339 aa11.66□□□□□ -0.54
CTC1-202ENST00000449476 ADKP55263 362 aaKnown RBP11.66□□□□□ -0.54
CTC1-202ENST00000449476 TUBB2AQ13885 445 aa11.66□□□□□ -0.54
CTC1-202ENST00000449476 DYMQ7RTS9 669 aa11.66□□□□□ -0.54
CTC1-202ENST00000449476 NSUN7Q8NE18 718 aaKnown RBP11.66□□□□□ -0.54
CTC1-202ENST00000449476 LZTS2Q9BRK4 669 aa11.66□□□□□ -0.54
CTC1-202ENST00000449476 TUBB2BQ9BVA1 445 aa11.66□□□□□ -0.54
CTC1-202ENST00000449476 NUP58Q9BVL2 599 aa11.66□□□□□ -0.54
CTC1-202ENST00000449476 ASAP1Q9ULH1 1129 aa11.66□□□□□ -0.54
CTC1-202ENST00000449476 CLIC4Q9Y696 253 aa11.66□□□□□ -0.54
CTC1-202ENST00000449476 ERBB3P21860 1342 aa11.65□□□□□ -0.54
CTC1-202ENST00000449476 TMEM110-MUSTN1A8MSY1 372 aa11.65□□□□□ -0.54
CTC1-202ENST00000449476 PTPN12Q05209 780 aaKnown RBP11.65□□□□□ -0.54
CTC1-202ENST00000449476 DNAJC21Q5F1R6 531 aaKnown RBP11.65□□□□□ -0.54
CTC1-202ENST00000449476 CLIC6Q96NY7 704 aa11.65□□□□□ -0.54
CTC1-202ENST00000449476 ZSCAN10Q96SZ4 725 aaPredicted RBP11.65□□□□□ -0.54
CTC1-202ENST00000449476 ARPP21Q9UBL0 812 aaPredicted RBP11.65□□□□□ -0.54
CTC1-202ENST00000449476 MAST3O60307 1309 aa11.65□□□□□ -0.54
CTC1-202ENST00000449476 ADCY7P51828 1080 aa11.65□□□□□ -0.54
CTC1-202ENST00000449476 RBM6P78332 1123 aaKnown RBP11.65□□□□□ -0.54
CTC1-202ENST00000449476 ZNF827Q17R98 1081 aa11.65□□□□□ -0.54
CTC1-202ENST00000449476 HERC4Q5GLZ8 1057 aaPredicted RBP11.65□□□□□ -0.54
CTC1-202ENST00000449476 HAUS3Q68CZ6 603 aa11.65□□□□□ -0.54
CTC1-202ENST00000449476 JAKMIP2Q96AA8 810 aa11.65□□□□□ -0.54
CTC1-202ENST00000449476 SLF1Q9BQI6 1058 aa11.65□□□□□ -0.54
CTC1-202ENST00000449476 BCL2L12Q9HB09 334 aa11.65□□□□□ -0.54
CTC1-202ENST00000449476 HECW2Q9P2P5 1572 aa11.65□□□□□ -0.54
CTC1-202ENST00000449476 ATP2C2O75185 946 aa11.65□□□□□ -0.54
CTC1-202ENST00000449476 LARGE1O95461 756 aa11.65□□□□□ -0.54
CTC1-202ENST00000449476 LONRF3Q496Y0 759 aa11.65□□□□□ -0.54
CTC1-202ENST00000449476 CABP7Q86V35 215 aa11.65□□□□□ -0.54
CTC1-202ENST00000449476 IMPG2Q9BZV3 1241 aa11.65□□□□□ -0.54
CTC1-202ENST00000449476 GLT8D2Q9H1C3 349 aa11.65□□□□□ -0.54
CTC1-202ENST00000449476 RTEL1Q9NZ71 1219 aa11.65□□□□□ -0.54
CTC1-202ENST00000449476 WWC3Q9ULE0 1092 aa11.65□□□□□ -0.54
CTC1-202ENST00000449476 CLTCL1P53675 1640 aa11.65□□□□□ -0.55
CTC1-202ENST00000449476 ERCC3P19447 782 aa11.64□□□□□ -0.55
CTC1-202ENST00000449476 CFAP58Q5T655 872 aa11.64□□□□□ -0.55
CTC1-202ENST00000449476 RBM26Q5T8P6 1007 aaKnown RBP11.64□□□□□ -0.55
CTC1-202ENST00000449476 KRBA2Q6ZNG9 492 aa11.64□□□□□ -0.55
CTC1-202ENST00000449476 REXO1Q8N1G1 1221 aaKnown RBP11.64□□□□□ -0.55
CTC1-202ENST00000449476 GIMAP7Q8NHV1 300 aa11.64□□□□□ -0.55
CTC1-202ENST00000449476 SYNCQ9H7C4 482 aa11.64□□□□□ -0.55
CTC1-202ENST00000449476 A0A1W2PQ27 194 aa11.64□□□□□ -0.55
CTC1-202ENST00000449476 A0A1W2PQ64 194 aa11.64□□□□□ -0.55
CTC1-202ENST00000449476 A0A1W2PQD8 194 aa11.64□□□□□ -0.55
CTC1-202ENST00000449476 EPB41P11171 864 aaKnown RBP11.64□□□□□ -0.55
CTC1-202ENST00000449476 SLC1A4P43007 532 aa11.64□□□□□ -0.55
CTC1-202ENST00000449476 NECTIN1Q15223 517 aa11.64□□□□□ -0.55
CTC1-202ENST00000449476 NBPF11Q86T75 865 aa11.64□□□□□ -0.55
CTC1-202ENST00000449476 FANCLQ9NW38 375 aa11.64□□□□□ -0.55
CTC1-202ENST00000449476 ZEB2O60315 1214 aa11.64□□□□□ -0.55
CTC1-202ENST00000449476 MAGEA1P43355 309 aa11.64□□□□□ -0.55
CTC1-202ENST00000449476 LRRC8AQ8IWT6 810 aa11.64□□□□□ -0.55
CTC1-202ENST00000449476 INCENPQ9NQS7 918 aa11.64□□□□□ -0.55
CTC1-202ENST00000449476 PKD2L1Q9P0L9 805 aa11.64□□□□□ -0.55
CTC1-202ENST00000449476 FRMD4BQ9Y2L6 1034 aa11.64□□□□□ -0.55
CTC1-202ENST00000449476 TMEM94Q12767 1356 aa11.63□□□□□ -0.55
CTC1-202ENST00000449476 GJC1P36383 396 aa11.63□□□□□ -0.55
CTC1-202ENST00000449476 CALCRLQ16602 461 aa11.63□□□□□ -0.55
CTC1-202ENST00000449476 VWA3BQ502W6 1294 aa11.63□□□□□ -0.55
CTC1-202ENST00000449476 APOA5Q6Q788 366 aa11.63□□□□□ -0.55
CTC1-202ENST00000449476 ARFGAP2Q8N6H7 521 aa11.63□□□□□ -0.55
CTC1-202ENST00000449476 TLDC2A0PJX2 215 aa11.63□□□□□ -0.55
CTC1-202ENST00000449476 EBAG9O00559 213 aa11.63□□□□□ -0.55
CTC1-202ENST00000449476 CHMP2AO43633 222 aa11.63□□□□□ -0.55
CTC1-202ENST00000449476 CHRNDQ07001 517 aa11.63□□□□□ -0.55
CTC1-202ENST00000449476 MPHOSPH6Q99547 160 aaKnown RBP11.63□□□□□ -0.55
CTC1-202ENST00000449476 CCDC77Q9BR77 488 aa11.63□□□□□ -0.55
CTC1-202ENST00000449476 ZBTB1Q9Y2K1 713 aa11.63□□□□□ -0.55
CTC1-202ENST00000449476 MED23Q9ULK4 1368 aa11.63□□□□□ -0.55
CTC1-202ENST00000449476 EEF2P13639 858 aaKnown RBP11.63□□□□□ -0.55
CTC1-202ENST00000449476 SLC39A14Q15043 492 aa11.63□□□□□ -0.55
CTC1-202ENST00000449476 GRIPAP1Q4V328 841 aa11.63□□□□□ -0.55
CTC1-202ENST00000449476 BLIDQ8IZY5 108 aa11.63□□□□□ -0.55
CTC1-202ENST00000449476 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.63□□□□□ -0.55
CTC1-202ENST00000449476 IKBKGQ9Y6K9 419 aa11.63□□□□□ -0.55
CTC1-202ENST00000449476 A0A1W2PRG0 241 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms