RNA–Protein interactions for RNA: ENST00000447683.2

OTUB1-204, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 2

Gene OTUB1, Length 2,315 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-204ENST00000447683 TXNRD3Q86VQ6 643 aa18.77■□□□□ 0.59
OTUB1-204ENST00000447683 CMTR1Q8N1G2 835 aaKnown RBP18.77■□□□□ 0.59
OTUB1-204ENST00000447683 DCP1AQ9NPI6 582 aaPredicted RBP18.77■□□□□ 0.59
OTUB1-204ENST00000447683 ATP8A2Q9NTI2 1148 aa18.77■□□□□ 0.59
OTUB1-204ENST00000447683 CLIP2Q9UDT6 1046 aa18.77■□□□□ 0.59
OTUB1-204ENST00000447683 TAOK2Q9UL54 1235 aa18.77■□□□□ 0.59
OTUB1-204ENST00000447683 RFC4P35249 363 aa18.76■□□□□ 0.59
OTUB1-204ENST00000447683 DPCR1Q3MIW9 517 aa18.76■□□□□ 0.59
OTUB1-204ENST00000447683 SBK1Q52WX2 424 aa18.76■□□□□ 0.59
OTUB1-204ENST00000447683 RILPL1Q5EBL4 403 aa18.76■□□□□ 0.59
OTUB1-204ENST00000447683 TRAPPC3LQ5T215 181 aa18.76■□□□□ 0.59
OTUB1-204ENST00000447683 IQCA1Q86XH1 822 aa18.76■□□□□ 0.59
OTUB1-204ENST00000447683 AOPEPQ8N6M6 819 aa18.76■□□□□ 0.59
OTUB1-204ENST00000447683 TUBE1Q9UJT0 475 aa18.76■□□□□ 0.59
OTUB1-204ENST00000447683 CHAF1AQ13111 956 aaPredicted RBP18.75■□□□□ 0.59
OTUB1-204ENST00000447683 IFIT1BQ5T764 474 aaKnown RBP18.75■□□□□ 0.59
OTUB1-204ENST00000447683 CCDC82Q8N4S0 544 aa18.75■□□□□ 0.59
OTUB1-204ENST00000447683 GJD4Q96KN9 370 aaPredicted RBP18.75■□□□□ 0.59
OTUB1-204ENST00000447683 AATFQ9NY61 560 aaKnown RBP eCLIP18.75■□□□□ 0.59
OTUB1-204ENST00000447683 NFIXQ14938 502 aa18.75■□□□□ 0.59
OTUB1-204ENST00000447683 ZRSR1Q15695 479 aaKnown RBP18.75■□□□□ 0.59
OTUB1-204ENST00000447683 CATIPQ7Z7H3 387 aa18.75■□□□□ 0.59
OTUB1-204ENST00000447683 CLIC6Q96NY7 704 aa18.75■□□□□ 0.59
OTUB1-204ENST00000447683 RBM28Q9NW13 759 aaKnown RBP18.75■□□□□ 0.59
OTUB1-204ENST00000447683 PRPF3O43395 683 aaKnown RBP18.74■□□□□ 0.59
OTUB1-204ENST00000447683 CALM1P0DP23 149 aa18.74■□□□□ 0.59
OTUB1-204ENST00000447683 CALM2P0DP24 149 aa18.74■□□□□ 0.59
OTUB1-204ENST00000447683 CALM3P0DP25 149 aa18.74■□□□□ 0.59
OTUB1-204ENST00000447683 TROAPQ12815 778 aa18.74■□□□□ 0.59
OTUB1-204ENST00000447683 GRAPQ13588 217 aa18.74■□□□□ 0.59
OTUB1-204ENST00000447683 PKN1Q16512 942 aa18.74■□□□□ 0.59
OTUB1-204ENST00000447683 SPTY2D1Q68D10 685 aaPredicted RBP18.74■□□□□ 0.59
OTUB1-204ENST00000447683 KRI1Q8N9T8 703 aaKnown RBP18.74■□□□□ 0.59
OTUB1-204ENST00000447683 GRAPLQ8TC17 118 aaPredicted RBP18.74■□□□□ 0.59
OTUB1-204ENST00000447683 LEMD3Q9Y2U8 911 aa18.74■□□□□ 0.59
OTUB1-204ENST00000447683 PRDM1O75626 825 aa18.74■□□□□ 0.59
OTUB1-204ENST00000447683 DDAH1O94760 285 aa18.74■□□□□ 0.59
OTUB1-204ENST00000447683 ELOA2Q8IYF1 753 aaPredicted RBP18.74■□□□□ 0.59
OTUB1-204ENST00000447683 ARPP21Q9UBL0 812 aaPredicted RBP18.74■□□□□ 0.59
OTUB1-204ENST00000447683 UBR3Q6ZT12 1888 aa18.73■□□□□ 0.59
OTUB1-204ENST00000447683 ONECUT3O60422 494 aaPredicted RBP18.73■□□□□ 0.59
OTUB1-204ENST00000447683 CCDC144BQ3MJ40 725 aa18.73■□□□□ 0.59
OTUB1-204ENST00000447683 FAM196AQ6ZSG2 479 aa18.73■□□□□ 0.59
OTUB1-204ENST00000447683 SHISA4Q96DD7 197 aa18.73■□□□□ 0.59
OTUB1-204ENST00000447683 PTPREP23469 700 aa18.73■□□□□ 0.59
OTUB1-204ENST00000447683 NR5A1Q13285 461 aa18.73■□□□□ 0.59
OTUB1-204ENST00000447683 DNTTIP2Q5QJE6 756 aaKnown RBP18.73■□□□□ 0.59
OTUB1-204ENST00000447683 MORC2Q9Y6X9 1032 aaPredicted RBP18.73■□□□□ 0.59
OTUB1-204ENST00000447683 ADRA2BP18089 450 aa18.72■□□□□ 0.59
OTUB1-204ENST00000447683 AKAP17AQ02040 695 aaKnown RBP18.72■□□□□ 0.59
OTUB1-204ENST00000447683 OXER1Q8TDS5 423 aa18.72■□□□□ 0.59
OTUB1-204ENST00000447683 FBXW7Q969H0 707 aa18.72■□□□□ 0.59
OTUB1-204ENST00000447683 FBXO2Q9UK22 296 aaPredicted RBP18.72■□□□□ 0.59
OTUB1-204ENST00000447683 KCNH3Q9ULD8 1083 aa18.72■□□□□ 0.59
OTUB1-204ENST00000447683 NPHP1O15259 732 aa18.72■□□□□ 0.59
OTUB1-204ENST00000447683 XBP1P17861 261 aa18.72■□□□□ 0.59
OTUB1-204ENST00000447683 EVX2Q03828 476 aa18.72■□□□□ 0.59
OTUB1-204ENST00000447683 LRMPQ12912 555 aa18.72■□□□□ 0.59
OTUB1-204ENST00000447683 C15orf52Q6ZUT6 534 aaKnown RBP18.72■□□□□ 0.59
OTUB1-204ENST00000447683 CNBD1Q8NA66 436 aa18.72■□□□□ 0.59
OTUB1-204ENST00000447683 WDR66Q8TBY9 1149 aa18.72■□□□□ 0.59
OTUB1-204ENST00000447683 PHF20Q9BVI0 1012 aa18.72■□□□□ 0.59
OTUB1-204ENST00000447683 BIN1O00499 593 aa18.71■□□□□ 0.59
OTUB1-204ENST00000447683 KRBA2Q6ZNG9 492 aa18.71■□□□□ 0.59
OTUB1-204ENST00000447683 ZNF579Q8NAF0 562 aaKnown RBP18.71■□□□□ 0.59
OTUB1-204ENST00000447683 CACTINQ8WUQ7 758 aaKnown RBP18.71■□□□□ 0.59
OTUB1-204ENST00000447683 GTPBP4Q9BZE4 634 aaKnown RBP18.71■□□□□ 0.59
OTUB1-204ENST00000447683 XDHP47989 1333 aa18.71■□□□□ 0.59
OTUB1-204ENST00000447683 UQCRHLA0A096LP55 91 aa18.71■□□□□ 0.58
OTUB1-204ENST00000447683 PLEKHA8P1O95397 391 aa18.71■□□□□ 0.58
OTUB1-204ENST00000447683 UQCRHP07919 91 aa18.71■□□□□ 0.58
OTUB1-204ENST00000447683 NCAPHQ15003 741 aa18.71■□□□□ 0.58
OTUB1-204ENST00000447683 TMTC3Q6ZXV5 915 aa18.71■□□□□ 0.58
OTUB1-204ENST00000447683 METTL16Q86W50 562 aaKnown RBP18.71■□□□□ 0.58
OTUB1-204ENST00000447683 DZIP1Q86YF9 867 aaKnown RBP18.71■□□□□ 0.58
OTUB1-204ENST00000447683 PRIMPOLQ96LW4 560 aa18.71■□□□□ 0.58
OTUB1-204ENST00000447683 LRRC4BQ9NT99 713 aa18.71■□□□□ 0.58
OTUB1-204ENST00000447683 MKRN1Q9UHC7 482 aaKnown RBP18.71■□□□□ 0.58
OTUB1-204ENST00000447683 PCDHB6Q9Y5E3 794 aa18.71■□□□□ 0.58
OTUB1-204ENST00000447683 SMTNL1A8MU46 457 aa18.7■□□□□ 0.58
OTUB1-204ENST00000447683 IKBKBO14920 756 aa18.7■□□□□ 0.58
OTUB1-204ENST00000447683 CYP2D6P10635 497 aa18.7■□□□□ 0.58
OTUB1-204ENST00000447683 NT5C2P49902 561 aa18.7■□□□□ 0.58
OTUB1-204ENST00000447683 LONRF3Q496Y0 759 aa18.7■□□□□ 0.58
OTUB1-204ENST00000447683 ANKIB1Q9P2G1 1089 aa18.7■□□□□ 0.58
OTUB1-204ENST00000447683 CEP131Q9UPN4 1083 aa18.7■□□□□ 0.58
OTUB1-204ENST00000447683 NEMFO60524 1076 aa18.69■□□□□ 0.58
OTUB1-204ENST00000447683 PDE4BQ07343 736 aa18.69■□□□□ 0.58
OTUB1-204ENST00000447683 VPS54Q9P1Q0 977 aa18.69■□□□□ 0.58
OTUB1-204ENST00000447683 SRPRBQ9Y5M8 271 aaKnown RBP18.69■□□□□ 0.58
OTUB1-204ENST00000447683 V9GY48 417 aaPredicted RBP18.69■□□□□ 0.58
OTUB1-204ENST00000447683 PRR5LQ6MZQ0 368 aa18.69■□□□□ 0.58
OTUB1-204ENST00000447683 LRRC8AQ8IWT6 810 aa18.69■□□□□ 0.58
OTUB1-204ENST00000447683 CERKQ8TCT0 537 aa18.69■□□□□ 0.58
OTUB1-204ENST00000447683 JAG2Q9Y219 1238 aa18.69■□□□□ 0.58
OTUB1-204ENST00000447683 CNTNAP5Q8WYK1 1306 aa18.69■□□□□ 0.58
OTUB1-204ENST00000447683 LDHBP07195 334 aaKnown RBP18.68■□□□□ 0.58
OTUB1-204ENST00000447683 KRT2P35908 639 aa18.68■□□□□ 0.58
OTUB1-204ENST00000447683 MDM2Q00987 491 aaPredicted RBP18.68■□□□□ 0.58
OTUB1-204ENST00000447683 PNOCQ13519 176 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms