RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 RSRC2Q7L4I2 434 aaKnown RBP21.8■■□□□ 1.08
SDCBP-204ENST00000447182 TRMT112Q9UI30 125 aaKnown RBP21.8■■□□□ 1.08
SDCBP-204ENST00000447182 PNPLA7Q6ZV29 1317 aa21.8■■□□□ 1.08
SDCBP-204ENST00000447182 ADKP55263 362 aaKnown RBP21.8■■□□□ 1.08
SDCBP-204ENST00000447182 UBXN6Q9BZV1 441 aa21.8■■□□□ 1.08
SDCBP-204ENST00000447182 ARMT1Q9H993 441 aa21.8■■□□□ 1.08
SDCBP-204ENST00000447182 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.8■■□□□ 1.08
SDCBP-204ENST00000447182 HSP90AA4PQ58FG1 418 aa21.79■■□□□ 1.08
SDCBP-204ENST00000447182 PANX2Q96RD6 677 aa21.79■■□□□ 1.08
SDCBP-204ENST00000447182 BCORQ6W2J9 1755 aa21.79■■□□□ 1.08
SDCBP-204ENST00000447182 SLC5A1P13866 664 aa21.79■■□□□ 1.08
SDCBP-204ENST00000447182 CYP2C19P33261 490 aa21.79■■□□□ 1.08
SDCBP-204ENST00000447182 PPP2R3AQ06190 1150 aa21.79■■□□□ 1.08
SDCBP-204ENST00000447182 RASGRF1Q13972 1273 aa21.79■■□□□ 1.08
SDCBP-204ENST00000447182 BRINP3Q76B58 766 aa21.79■■□□□ 1.08
SDCBP-204ENST00000447182 TRMT44Q8IYL2 757 aaKnown RBP21.79■■□□□ 1.08
SDCBP-204ENST00000447182 FAM177A1Q8N128 213 aaPredicted RBP21.79■■□□□ 1.08
SDCBP-204ENST00000447182 NACAP1Q9BZK3 213 aa21.79■■□□□ 1.08
SDCBP-204ENST00000447182 NUP98P52948 1817 aa21.78■■□□□ 1.08
SDCBP-204ENST00000447182 NR5A1Q13285 461 aa21.78■■□□□ 1.08
SDCBP-204ENST00000447182 ZNF827Q17R98 1081 aa21.78■■□□□ 1.08
SDCBP-204ENST00000447182 SAMSN1Q9NSI8 373 aaKnown RBP21.78■■□□□ 1.08
SDCBP-204ENST00000447182 ERICH2A1L162 156 aa21.77■■□□□ 1.08
SDCBP-204ENST00000447182 RABGGTAQ92696 567 aa21.77■■□□□ 1.08
SDCBP-204ENST00000447182 CCDC34Q96HJ3 373 aa21.77■■□□□ 1.08
SDCBP-204ENST00000447182 AK7Q96M32 723 aa21.77■■□□□ 1.08
SDCBP-204ENST00000447182 STRN4Q9NRL3 753 aa21.77■■□□□ 1.08
SDCBP-204ENST00000447182 AATFQ9NY61 560 aaKnown RBP eCLIP21.77■■□□□ 1.08
SDCBP-204ENST00000447182 PPP2R5BQ15173 497 aa21.77■■□□□ 1.08
SDCBP-204ENST00000447182 CC2D1AQ6P1N0 951 aaPredicted RBP21.77■■□□□ 1.08
SDCBP-204ENST00000447182 APTXQ7Z2E3 356 aaKnown RBP21.77■■□□□ 1.08
SDCBP-204ENST00000447182 GRAMD1CQ8IYS0 662 aa21.77■■□□□ 1.08
SDCBP-204ENST00000447182 FANCBQ8NB91 859 aa21.77■■□□□ 1.08
SDCBP-204ENST00000447182 CSRNP2Q9H175 543 aa21.77■■□□□ 1.08
SDCBP-204ENST00000447182 ERVV-1B6SEH8 477 aa21.76■■□□□ 1.07
SDCBP-204ENST00000447182 AKR1B15C9JRZ8 316 aaPredicted RBP21.76■■□□□ 1.07
SDCBP-204ENST00000447182 NAA15Q9BXJ9 866 aaKnown RBP21.76■■□□□ 1.07
SDCBP-204ENST00000447182 RNF41Q9H4P4 317 aaPredicted RBP21.76■■□□□ 1.07
SDCBP-204ENST00000447182 TBC1D8O95759 1140 aa21.76■■□□□ 1.07
SDCBP-204ENST00000447182 CCDC175P0C221 793 aa21.76■■□□□ 1.07
SDCBP-204ENST00000447182 CYP19A1P11511 503 aaPredicted RBP21.76■■□□□ 1.07
SDCBP-204ENST00000447182 TDO2P48775 406 aa21.76■■□□□ 1.07
SDCBP-204ENST00000447182 ZNF654Q8IZM8 581 aa21.76■■□□□ 1.07
SDCBP-204ENST00000447182 RNF26Q9BY78 433 aaPredicted RBP21.76■■□□□ 1.07
SDCBP-204ENST00000447182 SEC31BQ9NQW1 1179 aa21.76■■□□□ 1.07
SDCBP-204ENST00000447182 ITGB4P16144 1822 aa21.76■■□□□ 1.07
SDCBP-204ENST00000447182 MYH6P13533 1939 aa21.75■■□□□ 1.07
SDCBP-204ENST00000447182 ABCA3Q99758 1704 aa21.75■■□□□ 1.07
SDCBP-204ENST00000447182 PRKAB2O43741 272 aa21.75■■□□□ 1.07
SDCBP-204ENST00000447182 RRP12Q5JTH9 1297 aaKnown RBP21.75■■□□□ 1.07
SDCBP-204ENST00000447182 SPATA1Q5VX52 437 aa21.75■■□□□ 1.07
SDCBP-204ENST00000447182 SH3RF1Q7Z6J0 888 aa21.75■■□□□ 1.07
SDCBP-204ENST00000447182 LCORLQ8N3X6 602 aa21.75■■□□□ 1.07
SDCBP-204ENST00000447182 HELBQ8NG08 1087 aaPredicted RBP21.75■■□□□ 1.07
SDCBP-204ENST00000447182 OXER1Q8TDS5 423 aa21.75■■□□□ 1.07
SDCBP-204ENST00000447182 ZKSCAN3Q9BRR0 538 aa21.75■■□□□ 1.07
SDCBP-204ENST00000447182 SLC4A4Q9Y6R1 1079 aa21.75■■□□□ 1.07
SDCBP-204ENST00000447182 SOS2Q07890 1332 aaPredicted RBP21.75■■□□□ 1.07
SDCBP-204ENST00000447182 SEC31AO94979 1220 aaKnown RBP21.74■■□□□ 1.07
SDCBP-204ENST00000447182 PBX1P40424 430 aa21.74■■□□□ 1.07
SDCBP-204ENST00000447182 USP49Q70CQ1 688 aa21.74■■□□□ 1.07
SDCBP-204ENST00000447182 CABP5Q9NP86 173 aa21.74■■□□□ 1.07
SDCBP-204ENST00000447182 SEMA3EO15041 775 aa21.74■■□□□ 1.07
SDCBP-204ENST00000447182 CUL4BQ13620 913 aa21.74■■□□□ 1.07
SDCBP-204ENST00000447182 TEX35Q5T0J7 233 aa21.74■■□□□ 1.07
SDCBP-204ENST00000447182 JAKMIP3Q5VZ66 844 aa21.74■■□□□ 1.07
SDCBP-204ENST00000447182 GOLGA1Q92805 767 aa21.74■■□□□ 1.07
SDCBP-204ENST00000447182 TRIM75PA6NK02 468 aa21.73■■□□□ 1.07
SDCBP-204ENST00000447182 ZNF34Q8IZ26 560 aa21.73■■□□□ 1.07
SDCBP-204ENST00000447182 DHX58Q96C10 678 aa21.73■■□□□ 1.07
SDCBP-204ENST00000447182 DESI2Q9BSY9 194 aa21.73■■□□□ 1.07
SDCBP-204ENST00000447182 MRPL44Q9H9J2 332 aaKnown RBP21.73■■□□□ 1.07
SDCBP-204ENST00000447182 TOMM22Q9NS69 142 aa21.73■■□□□ 1.07
SDCBP-204ENST00000447182 ZKSCAN7Q9P0L1 754 aaPredicted RBP21.73■■□□□ 1.07
SDCBP-204ENST00000447182 PLCH1Q4KWH8 1693 aa21.73■■□□□ 1.07
SDCBP-204ENST00000447182 SASH3O75995 380 aa21.73■■□□□ 1.07
SDCBP-204ENST00000447182 CDKAL1Q5VV42 579 aa21.73■■□□□ 1.07
SDCBP-204ENST00000447182 CCDC82Q8N4S0 544 aa21.73■■□□□ 1.07
SDCBP-204ENST00000447182 CTAGE1Q96RT6 745 aa21.73■■□□□ 1.07
SDCBP-204ENST00000447182 ARFGAP3Q9NP61 516 aa21.73■■□□□ 1.07
SDCBP-204ENST00000447182 CALCOCO1Q9P1Z2 691 aa21.73■■□□□ 1.07
SDCBP-204ENST00000447182 ADGRG1Q9Y653 693 aa21.73■■□□□ 1.07
SDCBP-204ENST00000447182 RTL9Q8NET4 1388 aa21.72■■□□□ 1.07
SDCBP-204ENST00000447182 BMP15O95972 392 aa21.72■■□□□ 1.07
SDCBP-204ENST00000447182 XBP1P17861 261 aa21.72■■□□□ 1.07
SDCBP-204ENST00000447182 SEC23AQ15436 765 aa21.72■■□□□ 1.07
SDCBP-204ENST00000447182 CMTR1Q8N1G2 835 aaKnown RBP21.72■■□□□ 1.07
SDCBP-204ENST00000447182 CCDC12Q8WUD4 166 aaPredicted RBP21.72■■□□□ 1.07
SDCBP-204ENST00000447182 SLC4A9Q96Q91 983 aa21.72■■□□□ 1.07
SDCBP-204ENST00000447182 PARD6BQ9BYG5 372 aa21.72■■□□□ 1.07
SDCBP-204ENST00000447182 ADD3Q9UEY8 706 aaKnown RBP21.72■■□□□ 1.07
SDCBP-204ENST00000447182 ZBTB1Q9Y2K1 713 aa21.72■■□□□ 1.07
SDCBP-204ENST00000447182 TEX33O43247 280 aa21.71■■□□□ 1.07
SDCBP-204ENST00000447182 TXLNAP40222 546 aa21.71■■□□□ 1.07
SDCBP-204ENST00000447182 EVA1CP58658 441 aa21.71■■□□□ 1.07
SDCBP-204ENST00000447182 FERMT2Q96AC1 680 aa21.71■■□□□ 1.07
SDCBP-204ENST00000447182 GSDMAQ96QA5 445 aa21.71■■□□□ 1.07
SDCBP-204ENST00000447182 UBAC1Q9BSL1 405 aa21.71■■□□□ 1.07
SDCBP-204ENST00000447182 EPC1Q9H2F5 836 aa21.71■■□□□ 1.07
SDCBP-204ENST00000447182 ANAPC4Q9UJX5 808 aa21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 5.3 ms