RNA–Protein interactions for RNA: ENST00000446046.5

FN1-212, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,952 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-212ENST00000446046 CALCOCO2Q13137 446 aa13.06□□□□□ -0.32
FN1-212ENST00000446046 WWC3Q9ULE0 1092 aa13.06□□□□□ -0.32
FN1-212ENST00000446046 JAG2Q9Y219 1238 aa13.06□□□□□ -0.32
FN1-212ENST00000446046 MXRA7P84157 204 aa13.06□□□□□ -0.32
FN1-212ENST00000446046 TCP10Q12799 353 aa13.06□□□□□ -0.32
FN1-212ENST00000446046 CCDC129Q6ZRS4 1044 aa13.06□□□□□ -0.32
FN1-212ENST00000446046 SND1Q7KZF4 910 aaKnown RBP eCLIP13.06□□□□□ -0.322e-6■■■□□ 17.5
FN1-212ENST00000446046 PAIP2Q9BPZ3 127 aaKnown RBP13.06□□□□□ -0.32
FN1-212ENST00000446046 KIF24Q5T7B8 1368 aa13.05□□□□□ -0.32
FN1-212ENST00000446046 DISP1Q96F81 1524 aa13.05□□□□□ -0.32
FN1-212ENST00000446046 RIOK3O14730 519 aaKnown RBP13.05□□□□□ -0.32
FN1-212ENST00000446046 PSMC4P43686 418 aa13.05□□□□□ -0.32
FN1-212ENST00000446046 C20orf194Q5TEA3 1177 aa13.05□□□□□ -0.32
FN1-212ENST00000446046 JPH2Q9BR39 696 aaPredicted RBP13.05□□□□□ -0.32
FN1-212ENST00000446046 MRPL44Q9H9J2 332 aaKnown RBP13.05□□□□□ -0.32
FN1-212ENST00000446046 GINS2Q9Y248 185 aa13.05□□□□□ -0.32
FN1-212ENST00000446046 TTLL7Q6ZT98 887 aa13.05□□□□□ -0.32
FN1-212ENST00000446046 TYW5A2RUC4 315 aaKnown RBP13.05□□□□□ -0.32
FN1-212ENST00000446046 CTAGE15A4D2H0 777 aa13.05□□□□□ -0.32
FN1-212ENST00000446046 PFDN6O15212 129 aa13.05□□□□□ -0.32
FN1-212ENST00000446046 CTAGE8P0CG41 777 aa13.05□□□□□ -0.32
FN1-212ENST00000446046 TAOK1Q7L7X3 1001 aa13.05□□□□□ -0.32
FN1-212ENST00000446046 CTAGE6Q86UF2 777 aa13.05□□□□□ -0.32
FN1-212ENST00000446046 CTAGE4Q8IX94 777 aa13.05□□□□□ -0.32
FN1-212ENST00000446046 FEZ2Q9UHY8 353 aaPredicted RBP13.05□□□□□ -0.32
FN1-212ENST00000446046 XPOTO43592 962 aaKnown RBP13.05□□□□□ -0.32
FN1-212ENST00000446046 GAS7O60861 476 aa13.05□□□□□ -0.32
FN1-212ENST00000446046 POLR1AO95602 1720 aaPredicted RBP13.05□□□□□ -0.32
FN1-212ENST00000446046 APOBRQ0VD83 1088 aa13.05□□□□□ -0.32
FN1-212ENST00000446046 PNMA3Q9UL41 463 aa13.05□□□□□ -0.32
FN1-212ENST00000446046 MYOM2P54296 1465 aa13.05□□□□□ -0.32
FN1-212ENST00000446046 IVLP07476 585 aa13.05□□□□□ -0.32
FN1-212ENST00000446046 CPXCR1Q8N123 301 aa13.05□□□□□ -0.32
FN1-212ENST00000446046 FBF1Q8TES7 1133 aa13.05□□□□□ -0.32
FN1-212ENST00000446046 ADD3Q9UEY8 706 aaKnown RBP13.05□□□□□ -0.32
FN1-212ENST00000446046 VAV2P52735 878 aa13.04□□□□□ -0.32
FN1-212ENST00000446046 YARSP54577 528 aaKnown RBP13.04□□□□□ -0.32
FN1-212ENST00000446046 GEN1Q17RS7 908 aa13.04□□□□□ -0.32
FN1-212ENST00000446046 GLG1Q92896 1179 aa13.04□□□□□ -0.32
FN1-212ENST00000446046 LEMD3Q9Y2U8 911 aa13.04□□□□□ -0.32
FN1-212ENST00000446046 SAMD9LQ8IVG5 1584 aa13.04□□□□□ -0.32
FN1-212ENST00000446046 RPS6KB1P23443 525 aa13.04□□□□□ -0.32
FN1-212ENST00000446046 SYT1P21579 422 aa13.04□□□□□ -0.32
FN1-212ENST00000446046 RNF187Q5TA31 235 aaPredicted RBP13.04□□□□□ -0.32
FN1-212ENST00000446046 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.04□□□□□ -0.321e-323■□□□□ 9.4
FN1-212ENST00000446046 ACTN4O43707 911 aaKnown RBP13.04□□□□□ -0.32
FN1-212ENST00000446046 GCNT3O95395 438 aa13.04□□□□□ -0.32
FN1-212ENST00000446046 HARSP12081 509 aaKnown RBP13.04□□□□□ -0.32
FN1-212ENST00000446046 PTGS1P23219 599 aa13.04□□□□□ -0.32
FN1-212ENST00000446046 HAUS1Q96CS2 278 aa13.04□□□□□ -0.32
FN1-212ENST00000446046 ORAI2Q96SN7 254 aa13.04□□□□□ -0.32
FN1-212ENST00000446046 SBNO2Q9Y2G9 1366 aa13.04□□□□□ -0.32
FN1-212ENST00000446046 USH1GQ495M9 461 aa13.04□□□□□ -0.32
FN1-212ENST00000446046 CCDC184Q52MB2 194 aa13.04□□□□□ -0.32
FN1-212ENST00000446046 FAM160B1Q5W0V3 765 aa13.04□□□□□ -0.32
FN1-212ENST00000446046 METTL13Q8N6R0 699 aa13.04□□□□□ -0.32
FN1-212ENST00000446046 KBTBD3Q8NAB2 608 aa13.04□□□□□ -0.32
FN1-212ENST00000446046 MLXIPQ9HAP2 919 aa13.04□□□□□ -0.32
FN1-212ENST00000446046 TRPC6Q9Y210 931 aa13.04□□□□□ -0.32
FN1-212ENST00000446046 ITIH3Q06033 890 aa13.04□□□□□ -0.32
FN1-212ENST00000446046 AKNAD1Q5T1N1 836 aa13.04□□□□□ -0.32
FN1-212ENST00000446046 CC2D2BQ6DHV5 1058 aa13.03□□□□□ -0.32
FN1-212ENST00000446046 USP40Q9NVE5 1235 aa13.03□□□□□ -0.32
FN1-212ENST00000446046 NPHP4O75161 1426 aaPredicted RBP13.03□□□□□ -0.32
FN1-212ENST00000446046 GJC1P36383 396 aa13.03□□□□□ -0.32
FN1-212ENST00000446046 TUBB2AQ13885 445 aa13.03□□□□□ -0.32
FN1-212ENST00000446046 CERKLQ49MI3 558 aaPredicted RBP13.03□□□□□ -0.32
FN1-212ENST00000446046 UTP14CQ5TAP6 766 aaKnown RBP13.03□□□□□ -0.32
FN1-212ENST00000446046 TUBB2BQ9BVA1 445 aa13.03□□□□□ -0.32
FN1-212ENST00000446046 CHMP2AO43633 222 aa13.03□□□□□ -0.32
FN1-212ENST00000446046 FBLN1P23142 703 aa13.03□□□□□ -0.32
FN1-212ENST00000446046 DMP1Q13316 513 aaPredicted RBP13.03□□□□□ -0.32
FN1-212ENST00000446046 CUL4BQ13620 913 aa13.03□□□□□ -0.32
FN1-212ENST00000446046 BAZ2BQ9UIF8 2168 aaKnown RBP13.03□□□□□ -0.32
FN1-212ENST00000446046 RAPGEF1Q13905 1077 aa13.03□□□□□ -0.32
FN1-212ENST00000446046 FAM47CQ5HY64 1035 aa13.03□□□□□ -0.32
FN1-212ENST00000446046 CROCCP2Q86T23 111 aa13.03□□□□□ -0.32
FN1-212ENST00000446046 SYCE1Q8N0S2 351 aa13.03□□□□□ -0.32
FN1-212ENST00000446046 ATP8A2Q9NTI2 1148 aa13.03□□□□□ -0.32
FN1-212ENST00000446046 ECM2O94769 699 aaPredicted RBP13.03□□□□□ -0.32
FN1-212ENST00000446046 PLCB4Q15147 1175 aa13.03□□□□□ -0.32
FN1-212ENST00000446046 ABI1Q8IZP0 508 aa13.03□□□□□ -0.32
FN1-212ENST00000446046 UTP11Q9Y3A2 253 aaKnown RBP13.03□□□□□ -0.32
FN1-212ENST00000446046 SEMA3EO15041 775 aa13.03□□□□□ -0.32
FN1-212ENST00000446046 TNFAIP3P21580 790 aa13.03□□□□□ -0.32
FN1-212ENST00000446046 PDE4DQ08499 809 aa13.03□□□□□ -0.32
FN1-212ENST00000446046 B4E1Z4 1266 aa13.03□□□□□ -0.32
FN1-212ENST00000446046 SPOPO43791 374 aa13.03□□□□□ -0.32
FN1-212ENST00000446046 USP14P54578 494 aa13.03□□□□□ -0.32
FN1-212ENST00000446046 ZYXQ15942 572 aaKnown RBP13.03□□□□□ -0.32
FN1-212ENST00000446046 MYCT1Q8N699 235 aa13.03□□□□□ -0.32
FN1-212ENST00000446046 AP5M1Q9H0R1 490 aa13.03□□□□□ -0.32
FN1-212ENST00000446046 XDHP47989 1333 aa13.02□□□□□ -0.32
FN1-212ENST00000446046 MAIP1Q8WWC4 291 aa13.02□□□□□ -0.32
FN1-212ENST00000446046 PRIMPOLQ96LW4 560 aa13.02□□□□□ -0.32
FN1-212ENST00000446046 TIGD1Q96MW7 591 aa13.02□□□□□ -0.32
FN1-212ENST00000446046 RABGAP1Q9Y3P9 1069 aa13.02□□□□□ -0.32
FN1-212ENST00000446046 MAP7Q14244 749 aa13.02□□□□□ -0.32
FN1-212ENST00000446046 ANKRD35Q8N283 1001 aa13.02□□□□□ -0.32
FN1-212ENST00000446046 TGFBRAP1Q8WUH2 860 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms